ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZFT:C11:D5

Extra

PDB:
ATOM 1 O3' C A 10 42.487 14.688 46.958 1.00 56.88 O
ATOM 2 P A A 11 42.933 13.153 47.060 1.00 60.54 P
ATOM 3 OP1 A A 11 44.324 13.158 47.555 1.00 59.00 O
ATOM 4 OP2 A A 11 42.596 12.469 45.787 1.00 59.44 O
ATOM 5 O5' A A 11 42.023 12.550 48.210 1.00 56.88 O
ATOM 6 C5' A A 11 42.253 12.900 49.560 1.00 54.20 C
ATOM 7 C4' A A 11 41.238 12.229 50.433 1.00 57.15 C
ATOM 8 O4' A A 11 39.927 12.652 50.000 1.00 54.18 O
ATOM 9 C3' A A 11 41.184 10.721 50.314 1.00 57.17 C
ATOM 10 O3' A A 11 42.156 10.095 51.127 1.00 63.35 O
ATOM 11 C2' A A 11 39.764 10.422 50.763 1.00 57.24 C
ATOM 12 O2' A A 11 39.600 10.502 52.162 1.00 59.39 O
ATOM 13 C1' A A 11 39.016 11.579 50.115 1.00 52.25 C
ATOM 14 N9 A A 11 38.561 11.261 48.772 1.00 49.14 N
ATOM 15 C8 A A 11 39.114 11.678 47.589 1.00 48.13 C
ATOM 16 N7 A A 11 38.451 11.291 46.529 1.00 48.01 N
ATOM 17 C5 A A 11 37.397 10.558 47.051 1.00 45.89 C
ATOM 18 C6 A A 11 36.327 9.900 46.447 1.00 47.89 C
ATOM 19 N6 A A 11 36.122 9.888 45.129 1.00 48.10 N
ATOM 20 N1 A A 11 35.454 9.252 47.251 1.00 48.51 N
ATOM 21 C2 A A 11 35.656 9.281 48.578 1.00 49.04 C
ATOM 22 N3 A A 11 36.620 9.879 49.265 1.00 48.92 N
ATOM 23 C4 A A 11 37.466 10.510 48.430 1.00 48.02 C
ATOM 24 P C A 12 42.776 8.690 50.668 1.00 64.87 P
ATOM 25 OP1 C A 12 43.628 8.245 51.796 1.00 66.48 O
ATOM 26 OP2 C A 12 43.357 8.847 49.316 1.00 61.77 O
ATOM 27 O5' C A 12 41.512 7.727 50.593 1.00 58.63 O
TER

ATOM 1 O3' G B 4 28.665 3.520 40.727 1.00 64.46 O
ATOM 2 P G B 5 27.609 4.693 41.033 1.00 66.33 P
ATOM 3 OP1 G B 5 26.309 4.249 40.482 1.00 62.76 O
ATOM 4 OP2 G B 5 28.187 5.979 40.587 1.00 60.02 O
ATOM 5 O5' G B 5 27.496 4.682 42.622 1.00 64.09 O
ATOM 6 C5' G B 5 27.393 3.449 43.322 1.00 60.12 C
ATOM 7 C4' G B 5 27.743 3.637 44.778 1.00 62.11 C
ATOM 8 O4' G B 5 29.059 4.217 44.902 1.00 61.54 O
ATOM 9 C3' G B 5 26.791 4.605 45.469 1.00 61.52 C
ATOM 10 O3' G B 5 26.539 4.074 46.770 1.00 64.98 O
ATOM 11 C2' G B 5 27.499 5.960 45.435 1.00 62.41 C
ATOM 12 O2' G B 5 27.295 6.755 46.580 1.00 60.32 O
ATOM 13 C1' G B 5 28.957 5.514 45.422 1.00 60.98 C
ATOM 14 N9 G B 5 29.989 6.348 44.842 1.00 58.70 N
ATOM 15 C8 G B 5 30.021 6.947 43.609 1.00 59.57 C
ATOM 16 N7 G B 5 31.111 7.636 43.407 1.00 58.76 N
ATOM 17 C5 G B 5 31.836 7.477 44.583 1.00 56.33 C
ATOM 18 C6 G B 5 33.095 8.002 44.969 1.00 55.82 C
ATOM 19 O6 G B 5 33.840 8.759 44.334 1.00 56.03 O
ATOM 20 N1 G B 5 33.457 7.576 46.248 1.00 55.51 N
ATOM 21 C2 G B 5 32.696 6.769 47.059 1.00 58.36 C
ATOM 22 N2 G B 5 33.207 6.472 48.260 1.00 56.90 N
ATOM 23 N3 G B 5 31.517 6.291 46.715 1.00 58.39 N
ATOM 24 C4 G B 5 31.154 6.681 45.472 1.00 57.80 C
ATOM 25 P U B 6 25.125 4.279 47.479 1.00 69.12 P
ATOM 26 OP1 U B 6 24.996 3.188 48.472 1.00 62.43 O
ATOM 27 OP2 U B 6 24.109 4.432 46.413 1.00 62.90 O
ATOM 28 O5' U B 6 25.283 5.638 48.292 1.00 68.69 O
TER

Atoms:
OP1: (44.324,13.158,47.555)
OP2: (42.596,12.469,45.787)
C3': (41.184,10.721,50.314)
C1': (39.016,11.579,50.115)
C5': (42.253,12.900,49.560)
O4': (39.927,12.652,50.000)
C8: (39.114,11.678,47.589)
O2': (39.600,10.502,52.162)
C6: (36.327,9.900,46.447)
C5: (37.397,10.558,47.051)
C4: (37.466,10.510,48.430)
P: (42.933,13.153,47.060)
C4': (41.238,12.229,50.433)
C2': (39.764,10.422,50.763)
C2: (35.656,9.281,48.578)
N1: (35.454,9.252,47.251)
N3: (36.620,9.879,49.265)
N6: (36.122,9.888,45.129)
N7: (38.451,11.291,46.529)
N9: (38.561,11.261,48.772)
O5': (42.023,12.550,48.210)
O3': (42.156,10.095,51.127)
OP1: (26.309,4.249,40.482)
OP2: (28.187,5.979,40.587)
C3': (26.791,4.605,45.469)
C1': (28.957,5.514,45.422)
C5': (27.393,3.449,43.322)
O6: (33.840,8.759,44.334)
O4': (29.059,4.217,44.902)
C8: (30.021,6.947,43.609)
C2: (32.696,6.769,47.059)
C6: (33.095,8.002,44.969)
C5: (31.836,7.477,44.583)
C4: (31.154,6.681,45.472)
P: (27.609,4.693,41.033)
C4': (27.743,3.637,44.778)
C2': (27.499,5.960,45.435)
O2': (27.295,6.755,46.580)
N1: (33.457,7.576,46.248)
N2: (33.207,6.472,48.260)
N3: (31.517,6.291,46.715)
N7: (31.111,7.636,43.407)
N9: (29.989,6.348,44.842)
O5': (27.496,4.682,42.622)
O3': (26.539,4.074,46.770)
Image (generated by PyMOL):
PyMOL image
show in jmol