ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A9:A164

Extra

PDB:
ATOM 1 O3' G A 8 32.637 7.553 31.152 1.00 25.71 O
ATOM 2 P A A 9 32.456 9.151 31.185 1.00 25.20 P
ATOM 3 OP1 A A 9 32.759 9.598 32.563 1.00 24.98 O
ATOM 4 OP2 A A 9 31.149 9.497 30.572 1.00 24.98 O
ATOM 5 O5' A A 9 33.609 9.636 30.187 1.00 23.58 O
ATOM 6 C5' A A 9 34.951 9.283 30.457 1.00 22.75 C
ATOM 7 C4' A A 9 35.795 9.579 29.242 1.00 23.11 C
ATOM 8 O4' A A 9 35.262 8.846 28.129 1.00 22.78 O
ATOM 9 C3' A A 9 35.676 11.001 28.735 1.00 24.26 C
ATOM 10 O3' A A 9 36.476 11.872 29.525 1.00 25.95 O
ATOM 11 C2' A A 9 36.144 10.877 27.286 1.00 23.05 C
ATOM 12 O2' A A 9 37.548 10.832 27.179 1.00 22.99 O
ATOM 13 C1' A A 9 35.581 9.510 26.918 1.00 21.54 C
ATOM 14 N9 A A 9 34.387 9.469 26.066 1.00 20.10 N
ATOM 15 C8 A A 9 33.085 9.322 26.469 1.00 19.40 C
ATOM 16 N7 A A 9 32.226 9.290 25.471 1.00 19.39 N
ATOM 17 C5 A A 9 33.023 9.409 24.343 1.00 18.98 C
ATOM 18 C6 A A 9 32.737 9.436 22.962 1.00 18.33 C
ATOM 19 N6 A A 9 31.505 9.345 22.482 1.00 19.30 N
ATOM 20 N1 A A 9 33.750 9.564 22.081 1.00 18.15 N
ATOM 21 C2 A A 9 34.996 9.660 22.559 1.00 19.00 C
ATOM 22 N3 A A 9 35.393 9.645 23.840 1.00 20.27 N
ATOM 23 C4 A A 9 34.354 9.518 24.692 1.00 19.49 C
ATOM 24 P G A 10 36.127 13.431 29.577 1.00 26.17 P
ATOM 25 OP1 G A 10 36.452 13.960 30.927 1.00 25.51 O
ATOM 26 OP2 G A 10 34.778 13.635 29.001 1.00 25.78 O
ATOM 27 O5' G A 10 37.190 13.943 28.515 1.00 25.05 O
TER

ATOM 1 O3' A B 163 28.375 5.088 12.389 1.00 27.96 O
ATOM 2 P G B 164 29.503 4.406 13.293 1.00 28.04 P
ATOM 3 OP1 G B 164 30.002 3.221 12.556 1.00 28.12 O
ATOM 4 OP2 G B 164 28.935 4.227 14.658 1.00 27.70 O
ATOM 5 O5' G B 164 30.662 5.513 13.358 1.00 26.03 O
ATOM 6 C5' G B 164 31.797 5.442 12.511 1.00 24.31 C
ATOM 7 C4' G B 164 32.897 6.367 12.992 1.00 23.26 C
ATOM 8 O4' G B 164 32.323 7.577 13.537 1.00 22.54 O
ATOM 9 C3' G B 164 33.747 5.840 14.131 1.00 23.23 C
ATOM 10 O3' G B 164 34.771 5.028 13.631 1.00 24.23 O
ATOM 11 C2' G B 164 34.325 7.122 14.708 1.00 22.68 C
ATOM 12 O2' G B 164 35.439 7.624 13.996 1.00 23.08 O
ATOM 13 C1' G B 164 33.135 8.059 14.580 1.00 21.38 C
ATOM 14 N9 G B 164 32.317 8.060 15.780 1.00 20.56 N
ATOM 15 C8 G B 164 31.017 7.656 15.897 1.00 20.20 C
ATOM 16 N7 G B 164 30.562 7.782 17.107 1.00 20.76 N
ATOM 17 C5 G B 164 31.630 8.294 17.841 1.00 20.26 C
ATOM 18 C6 G B 164 31.744 8.644 19.213 1.00 19.71 C
ATOM 19 O6 G B 164 30.887 8.563 20.102 1.00 19.80 O
ATOM 20 N1 G B 164 33.006 9.129 19.525 1.00 19.06 N
ATOM 21 C2 G B 164 34.023 9.260 18.619 1.00 19.58 C
ATOM 22 N2 G B 164 35.190 9.743 19.054 1.00 20.93 N
ATOM 23 N3 G B 164 33.931 8.935 17.352 1.00 19.82 N
ATOM 24 C4 G B 164 32.713 8.463 17.029 1.00 20.00 C
ATOM 25 P C B 165 35.075 3.626 14.329 1.00 25.10 P
ATOM 26 OP1 C B 165 35.863 2.855 13.339 1.00 24.87 O
ATOM 27 OP2 C B 165 33.821 3.076 14.910 1.00 24.11 O
ATOM 28 O5' C B 165 36.003 4.003 15.572 1.00 25.11 O
TER

Atoms:
OP1: (32.759,9.598,32.563)
OP2: (31.149,9.497,30.572)
C3': (35.676,11.001,28.735)
C1': (35.581,9.510,26.918)
C5': (34.951,9.283,30.457)
O4': (35.262,8.846,28.129)
C8: (33.085,9.322,26.469)
O2': (37.548,10.832,27.179)
C6: (32.737,9.436,22.962)
C5: (33.023,9.409,24.343)
C4: (34.354,9.518,24.692)
P: (32.456,9.151,31.185)
C4': (35.795,9.579,29.242)
C2': (36.144,10.877,27.286)
C2: (34.996,9.660,22.559)
N1: (33.750,9.564,22.081)
N3: (35.393,9.645,23.840)
N6: (31.505,9.345,22.482)
N7: (32.226,9.290,25.471)
N9: (34.387,9.469,26.066)
O5': (33.609,9.636,30.187)
O3': (36.476,11.872,29.525)
OP1: (30.002,3.221,12.556)
OP2: (28.935,4.227,14.658)
C3': (33.747,5.840,14.131)
C1': (33.135,8.059,14.580)
C5': (31.797,5.442,12.511)
O6: (30.887,8.563,20.102)
O4': (32.323,7.577,13.537)
C8: (31.017,7.656,15.897)
C2: (34.023,9.260,18.619)
C6: (31.744,8.644,19.213)
C5: (31.630,8.294,17.841)
C4: (32.713,8.463,17.029)
P: (29.503,4.406,13.293)
C4': (32.897,6.367,12.992)
C2': (34.325,7.122,14.708)
O2': (35.439,7.624,13.996)
N1: (33.006,9.129,19.525)
N2: (35.190,9.743,19.054)
N3: (33.931,8.935,17.352)
N7: (30.562,7.782,17.107)
N9: (32.317,8.060,15.780)
O5': (30.662,5.513,13.358)
O3': (34.771,5.028,13.631)
Image (generated by PyMOL):
PyMOL image
show in jmol