Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:096:061
Extra
PDB:
ATOM 1 O3' G A 95 59.708 151.975 15.962 1.00 66.97 O
ATOM 2 P A A 96 60.749 152.563 17.049 1.00 67.76 P
ATOM 3 OP1 A A 96 62.000 152.931 16.323 1.00 67.62 O
ATOM 4 OP2 A A 96 60.824 151.630 18.206 1.00 67.88 O
ATOM 5 O5' A A 96 60.072 153.919 17.539 1.00 65.02 O
ATOM 6 C5' A A 96 60.067 155.066 16.680 1.00 64.51 C
ATOM 7 C4' A A 96 59.812 156.324 17.469 1.00 63.75 C
ATOM 8 O4' A A 96 58.445 156.347 17.938 1.00 63.25 O
ATOM 9 C3' A A 96 60.634 156.517 18.729 1.00 62.75 C
ATOM 10 O3' A A 96 61.941 156.988 18.447 1.00 63.51 O
ATOM 11 C2' A A 96 59.800 157.537 19.481 1.00 61.74 C
ATOM 12 O2' A A 96 59.940 158.838 18.961 1.00 61.16 O
ATOM 13 C1' A A 96 58.388 157.040 19.173 1.00 62.81 C
ATOM 14 N9 A A 96 57.915 156.112 20.194 1.00 63.32 N
ATOM 15 C8 A A 96 57.950 154.738 20.185 1.00 62.88 C
ATOM 16 N7 A A 96 57.448 154.193 21.264 1.00 63.40 N
ATOM 17 C5 A A 96 57.058 155.279 22.036 1.00 63.48 C
ATOM 18 C6 A A 96 56.452 155.373 23.296 1.00 63.63 C
ATOM 19 N6 A A 96 56.122 154.316 24.036 1.00 64.37 N
ATOM 20 N1 A A 96 56.194 156.608 23.778 1.00 63.67 N
ATOM 21 C2 A A 96 56.531 157.669 23.036 1.00 62.53 C
ATOM 22 N3 A A 96 57.101 157.709 21.839 1.00 62.63 N
ATOM 23 C4 A A 96 57.340 156.466 21.389 1.00 63.17 C
ATOM 24 P U A 97 63.156 156.563 19.403 1.00 64.38 P
ATOM 25 OP1 U A 97 64.391 157.135 18.813 1.00 64.75 O
ATOM 26 OP2 U A 97 63.071 155.098 19.629 1.00 65.26 O
ATOM 27 O5' U A 97 62.831 157.312 20.775 1.00 62.30 O
TER
ATOM 1 O3' A B 60 47.375 158.532 32.387 1.00 65.42 O
ATOM 2 P G B 61 46.880 158.794 30.878 1.00 67.38 P
ATOM 3 OP1 G B 61 46.258 160.152 30.790 1.00 65.84 O
ATOM 4 OP2 G B 61 46.105 157.594 30.444 1.00 67.24 O
ATOM 5 O5' G B 61 48.244 158.823 30.067 1.00 64.71 O
ATOM 6 C5' G B 61 48.303 159.322 28.738 1.00 62.88 C
ATOM 7 C4' G B 61 49.518 160.189 28.588 1.00 62.50 C
ATOM 8 O4' G B 61 50.624 159.583 29.303 1.00 58.94 O
ATOM 9 C3' G B 61 50.019 160.357 27.166 1.00 64.01 C
ATOM 10 O3' G B 61 49.277 161.361 26.457 1.00 67.20 O
ATOM 11 C2' G B 61 51.492 160.682 27.392 1.00 60.60 C
ATOM 12 O2' G B 61 51.700 162.013 27.816 1.00 62.40 O
ATOM 13 C1' G B 61 51.818 159.765 28.572 1.00 56.47 C
ATOM 14 N9 G B 61 52.300 158.448 28.181 1.00 52.75 N
ATOM 15 C8 G B 61 51.678 157.242 28.390 1.00 51.55 C
ATOM 16 N7 G B 61 52.370 156.228 27.950 1.00 50.74 N
ATOM 17 C5 G B 61 53.516 156.800 27.415 1.00 50.44 C
ATOM 18 C6 G B 61 54.639 156.202 26.793 1.00 49.59 C
ATOM 19 O6 G B 61 54.862 155.006 26.592 1.00 51.45 O
ATOM 20 N1 G B 61 55.563 157.150 26.389 1.00 48.17 N
ATOM 21 C2 G B 61 55.431 158.500 26.558 1.00 50.40 C
ATOM 22 N2 G B 61 56.434 159.261 26.091 1.00 52.07 N
ATOM 23 N3 G B 61 54.395 159.072 27.139 1.00 51.34 N
ATOM 24 C4 G B 61 53.482 158.168 27.542 1.00 51.53 C
ATOM 25 P C B 62 48.874 161.118 24.911 1.00 69.41 P
ATOM 26 OP1 C B 62 47.914 162.193 24.529 1.00 68.35 O
ATOM 27 OP2 C B 62 48.493 159.693 24.713 1.00 67.76 O
ATOM 28 O5' C B 62 50.245 161.338 24.133 1.00 67.86 O
TER
ATOM 2 P A A 96 60.749 152.563 17.049 1.00 67.76 P
ATOM 3 OP1 A A 96 62.000 152.931 16.323 1.00 67.62 O
ATOM 4 OP2 A A 96 60.824 151.630 18.206 1.00 67.88 O
ATOM 5 O5' A A 96 60.072 153.919 17.539 1.00 65.02 O
ATOM 6 C5' A A 96 60.067 155.066 16.680 1.00 64.51 C
ATOM 7 C4' A A 96 59.812 156.324 17.469 1.00 63.75 C
ATOM 8 O4' A A 96 58.445 156.347 17.938 1.00 63.25 O
ATOM 9 C3' A A 96 60.634 156.517 18.729 1.00 62.75 C
ATOM 10 O3' A A 96 61.941 156.988 18.447 1.00 63.51 O
ATOM 11 C2' A A 96 59.800 157.537 19.481 1.00 61.74 C
ATOM 12 O2' A A 96 59.940 158.838 18.961 1.00 61.16 O
ATOM 13 C1' A A 96 58.388 157.040 19.173 1.00 62.81 C
ATOM 14 N9 A A 96 57.915 156.112 20.194 1.00 63.32 N
ATOM 15 C8 A A 96 57.950 154.738 20.185 1.00 62.88 C
ATOM 16 N7 A A 96 57.448 154.193 21.264 1.00 63.40 N
ATOM 17 C5 A A 96 57.058 155.279 22.036 1.00 63.48 C
ATOM 18 C6 A A 96 56.452 155.373 23.296 1.00 63.63 C
ATOM 19 N6 A A 96 56.122 154.316 24.036 1.00 64.37 N
ATOM 20 N1 A A 96 56.194 156.608 23.778 1.00 63.67 N
ATOM 21 C2 A A 96 56.531 157.669 23.036 1.00 62.53 C
ATOM 22 N3 A A 96 57.101 157.709 21.839 1.00 62.63 N
ATOM 23 C4 A A 96 57.340 156.466 21.389 1.00 63.17 C
ATOM 24 P U A 97 63.156 156.563 19.403 1.00 64.38 P
ATOM 25 OP1 U A 97 64.391 157.135 18.813 1.00 64.75 O
ATOM 26 OP2 U A 97 63.071 155.098 19.629 1.00 65.26 O
ATOM 27 O5' U A 97 62.831 157.312 20.775 1.00 62.30 O
TER
ATOM 1 O3' A B 60 47.375 158.532 32.387 1.00 65.42 O
ATOM 2 P G B 61 46.880 158.794 30.878 1.00 67.38 P
ATOM 3 OP1 G B 61 46.258 160.152 30.790 1.00 65.84 O
ATOM 4 OP2 G B 61 46.105 157.594 30.444 1.00 67.24 O
ATOM 5 O5' G B 61 48.244 158.823 30.067 1.00 64.71 O
ATOM 6 C5' G B 61 48.303 159.322 28.738 1.00 62.88 C
ATOM 7 C4' G B 61 49.518 160.189 28.588 1.00 62.50 C
ATOM 8 O4' G B 61 50.624 159.583 29.303 1.00 58.94 O
ATOM 9 C3' G B 61 50.019 160.357 27.166 1.00 64.01 C
ATOM 10 O3' G B 61 49.277 161.361 26.457 1.00 67.20 O
ATOM 11 C2' G B 61 51.492 160.682 27.392 1.00 60.60 C
ATOM 12 O2' G B 61 51.700 162.013 27.816 1.00 62.40 O
ATOM 13 C1' G B 61 51.818 159.765 28.572 1.00 56.47 C
ATOM 14 N9 G B 61 52.300 158.448 28.181 1.00 52.75 N
ATOM 15 C8 G B 61 51.678 157.242 28.390 1.00 51.55 C
ATOM 16 N7 G B 61 52.370 156.228 27.950 1.00 50.74 N
ATOM 17 C5 G B 61 53.516 156.800 27.415 1.00 50.44 C
ATOM 18 C6 G B 61 54.639 156.202 26.793 1.00 49.59 C
ATOM 19 O6 G B 61 54.862 155.006 26.592 1.00 51.45 O
ATOM 20 N1 G B 61 55.563 157.150 26.389 1.00 48.17 N
ATOM 21 C2 G B 61 55.431 158.500 26.558 1.00 50.40 C
ATOM 22 N2 G B 61 56.434 159.261 26.091 1.00 52.07 N
ATOM 23 N3 G B 61 54.395 159.072 27.139 1.00 51.34 N
ATOM 24 C4 G B 61 53.482 158.168 27.542 1.00 51.53 C
ATOM 25 P C B 62 48.874 161.118 24.911 1.00 69.41 P
ATOM 26 OP1 C B 62 47.914 162.193 24.529 1.00 68.35 O
ATOM 27 OP2 C B 62 48.493 159.693 24.713 1.00 67.76 O
ATOM 28 O5' C B 62 50.245 161.338 24.133 1.00 67.86 O
TER
Atoms:
OP1: (62.000,152.931,16.323)
OP2: (60.824,151.630,18.206)
C3': (60.634,156.517,18.729)
C1': (58.388,157.040,19.173)
C5': (60.067,155.066,16.680)
O4': (58.445,156.347,17.938)
C8: (57.950,154.738,20.185)
O2': (59.940,158.838,18.961)
C6: (56.452,155.373,23.296)
C5: (57.058,155.279,22.036)
C4: (57.340,156.466,21.389)
P: (60.749,152.563,17.049)
C4': (59.812,156.324,17.469)
C2': (59.800,157.537,19.481)
C2: (56.531,157.669,23.036)
N1: (56.194,156.608,23.778)
N3: (57.101,157.709,21.839)
N6: (56.122,154.316,24.036)
N7: (57.448,154.193,21.264)
N9: (57.915,156.112,20.194)
O5': (60.072,153.919,17.539)
O3': (61.941,156.988,18.447)
OP2: (60.824,151.630,18.206)
C3': (60.634,156.517,18.729)
C1': (58.388,157.040,19.173)
C5': (60.067,155.066,16.680)
O4': (58.445,156.347,17.938)
C8: (57.950,154.738,20.185)
O2': (59.940,158.838,18.961)
C6: (56.452,155.373,23.296)
C5: (57.058,155.279,22.036)
C4: (57.340,156.466,21.389)
P: (60.749,152.563,17.049)
C4': (59.812,156.324,17.469)
C2': (59.800,157.537,19.481)
C2: (56.531,157.669,23.036)
N1: (56.194,156.608,23.778)
N3: (57.101,157.709,21.839)
N6: (56.122,154.316,24.036)
N7: (57.448,154.193,21.264)
N9: (57.915,156.112,20.194)
O5': (60.072,153.919,17.539)
O3': (61.941,156.988,18.447)
OP1: (46.258,160.152,30.790)
OP2: (46.105,157.594,30.444)
C3': (50.019,160.357,27.166)
C1': (51.818,159.765,28.572)
C5': (48.303,159.322,28.738)
O6: (54.862,155.006,26.592)
O4': (50.624,159.583,29.303)
C8: (51.678,157.242,28.390)
C2: (55.431,158.500,26.558)
C6: (54.639,156.202,26.793)
C5: (53.516,156.800,27.415)
C4: (53.482,158.168,27.542)
P: (46.880,158.794,30.878)
C4': (49.518,160.189,28.588)
C2': (51.492,160.682,27.392)
O2': (51.700,162.013,27.816)
N1: (55.563,157.150,26.389)
N2: (56.434,159.261,26.091)
N3: (54.395,159.072,27.139)
N7: (52.370,156.228,27.950)
N9: (52.300,158.448,28.181)
O5': (48.244,158.823,30.067)
O3': (49.277,161.361,26.457)
OP2: (46.105,157.594,30.444)
C3': (50.019,160.357,27.166)
C1': (51.818,159.765,28.572)
C5': (48.303,159.322,28.738)
O6: (54.862,155.006,26.592)
O4': (50.624,159.583,29.303)
C8: (51.678,157.242,28.390)
C2: (55.431,158.500,26.558)
C6: (54.639,156.202,26.793)
C5: (53.516,156.800,27.415)
C4: (53.482,158.168,27.542)
P: (46.880,158.794,30.878)
C4': (49.518,160.189,28.588)
C2': (51.492,160.682,27.392)
O2': (51.700,162.013,27.816)
N1: (55.563,157.150,26.389)
N2: (56.434,159.261,26.091)
N3: (54.395,159.072,27.139)
N7: (52.370,156.228,27.950)
N9: (52.300,158.448,28.181)
O5': (48.244,158.823,30.067)
O3': (49.277,161.361,26.457)
Image (generated by PyMOL):