Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02494:02037
Extra
PDB:
ATOM 1 O3' U A2493 41.172 134.596 108.628 1.00 31.25 O
ATOM 2 P A A2494 41.148 135.435 109.997 1.00 31.03 P
ATOM 3 OP1 A A2494 40.286 134.692 110.954 1.00 30.78 O
ATOM 4 OP2 A A2494 40.847 136.850 109.680 1.00 29.49 O
ATOM 5 O5' A A2494 42.653 135.386 110.499 1.00 31.75 O
ATOM 6 C5' A A2494 43.181 134.222 111.150 1.00 31.20 C
ATOM 7 C4' A A2494 44.491 134.559 111.808 1.00 31.55 C
ATOM 8 O4' A A2494 45.495 134.840 110.795 1.00 31.23 O
ATOM 9 C3' A A2494 44.480 135.817 112.660 1.00 31.63 C
ATOM 10 O3' A A2494 43.928 135.569 113.942 1.00 30.94 O
ATOM 11 C2' A A2494 45.957 136.180 112.709 1.00 32.71 C
ATOM 12 O2' A A2494 46.678 135.397 113.642 1.00 35.83 O
ATOM 13 C1' A A2494 46.398 135.820 111.285 1.00 31.77 C
ATOM 14 N9 A A2494 46.387 136.972 110.383 1.00 32.18 N
ATOM 15 C8 A A2494 45.380 137.437 109.569 1.00 31.84 C
ATOM 16 N7 A A2494 45.692 138.534 108.917 1.00 31.98 N
ATOM 17 C5 A A2494 46.995 138.804 109.321 1.00 32.66 C
ATOM 18 C6 A A2494 47.904 139.838 109.000 1.00 32.28 C
ATOM 19 N6 A A2494 47.635 140.847 108.170 1.00 31.81 N
ATOM 20 N1 A A2494 49.120 139.800 109.576 1.00 33.78 N
ATOM 21 C2 A A2494 49.400 138.803 110.422 1.00 34.15 C
ATOM 22 N3 A A2494 48.639 137.787 110.810 1.00 34.29 N
ATOM 23 C4 A A2494 47.436 137.843 110.215 1.00 33.42 C
ATOM 24 P C A2495 43.029 136.693 114.656 1.00 33.01 P
ATOM 25 OP1 C A2495 42.259 136.000 115.715 1.00 34.20 O
ATOM 26 OP2 C A2495 42.315 137.510 113.650 1.00 33.79 O
ATOM 27 O5' C A2495 44.084 137.653 115.357 1.00 33.35 O
TER
ATOM 1 O3' G B2036 54.596 148.942 108.993 1.00 33.45 O
ATOM 2 P G B2037 55.567 148.521 107.788 1.00 34.03 P
ATOM 3 OP1 G B2037 56.588 149.595 107.729 1.00 34.86 O
ATOM 4 OP2 G B2037 54.803 148.165 106.569 1.00 34.91 O
ATOM 5 O5' G B2037 56.286 147.212 108.326 1.00 34.64 O
ATOM 6 C5' G B2037 57.082 147.256 109.518 1.00 32.86 C
ATOM 7 C4' G B2037 56.887 145.993 110.307 1.00 32.75 C
ATOM 8 O4' G B2037 55.490 145.865 110.691 1.00 32.05 O
ATOM 9 C3' G B2037 57.135 144.720 109.526 1.00 33.00 C
ATOM 10 O3' G B2037 58.508 144.417 109.382 1.00 30.75 O
ATOM 11 C2' G B2037 56.370 143.685 110.334 1.00 31.56 C
ATOM 12 O2' G B2037 57.050 143.257 111.493 1.00 34.36 O
ATOM 13 C1' G B2037 55.133 144.490 110.729 1.00 31.60 C
ATOM 14 N9 G B2037 54.043 144.258 109.790 1.00 31.10 N
ATOM 15 C8 G B2037 53.907 144.766 108.519 1.00 31.51 C
ATOM 16 N7 G B2037 52.846 144.324 107.902 1.00 32.48 N
ATOM 17 C5 G B2037 52.238 143.484 108.828 1.00 32.52 C
ATOM 18 C6 G B2037 51.055 142.705 108.729 1.00 31.53 C
ATOM 19 O6 G B2037 50.286 142.595 107.773 1.00 34.79 O
ATOM 20 N1 G B2037 50.807 142.002 109.902 1.00 29.47 N
ATOM 21 C2 G B2037 51.598 142.037 111.024 1.00 29.07 C
ATOM 22 N2 G B2037 51.202 141.288 112.056 1.00 26.61 N
ATOM 23 N3 G B2037 52.699 142.754 111.127 1.00 29.40 N
ATOM 24 C4 G B2037 52.958 143.446 110.001 1.00 30.59 C
ATOM 25 P G B2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 26 OP1 G B2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 27 OP2 G B2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 28 O5' G B2038 58.420 141.994 108.920 1.00 27.92 O
TER
ATOM 2 P A A2494 41.148 135.435 109.997 1.00 31.03 P
ATOM 3 OP1 A A2494 40.286 134.692 110.954 1.00 30.78 O
ATOM 4 OP2 A A2494 40.847 136.850 109.680 1.00 29.49 O
ATOM 5 O5' A A2494 42.653 135.386 110.499 1.00 31.75 O
ATOM 6 C5' A A2494 43.181 134.222 111.150 1.00 31.20 C
ATOM 7 C4' A A2494 44.491 134.559 111.808 1.00 31.55 C
ATOM 8 O4' A A2494 45.495 134.840 110.795 1.00 31.23 O
ATOM 9 C3' A A2494 44.480 135.817 112.660 1.00 31.63 C
ATOM 10 O3' A A2494 43.928 135.569 113.942 1.00 30.94 O
ATOM 11 C2' A A2494 45.957 136.180 112.709 1.00 32.71 C
ATOM 12 O2' A A2494 46.678 135.397 113.642 1.00 35.83 O
ATOM 13 C1' A A2494 46.398 135.820 111.285 1.00 31.77 C
ATOM 14 N9 A A2494 46.387 136.972 110.383 1.00 32.18 N
ATOM 15 C8 A A2494 45.380 137.437 109.569 1.00 31.84 C
ATOM 16 N7 A A2494 45.692 138.534 108.917 1.00 31.98 N
ATOM 17 C5 A A2494 46.995 138.804 109.321 1.00 32.66 C
ATOM 18 C6 A A2494 47.904 139.838 109.000 1.00 32.28 C
ATOM 19 N6 A A2494 47.635 140.847 108.170 1.00 31.81 N
ATOM 20 N1 A A2494 49.120 139.800 109.576 1.00 33.78 N
ATOM 21 C2 A A2494 49.400 138.803 110.422 1.00 34.15 C
ATOM 22 N3 A A2494 48.639 137.787 110.810 1.00 34.29 N
ATOM 23 C4 A A2494 47.436 137.843 110.215 1.00 33.42 C
ATOM 24 P C A2495 43.029 136.693 114.656 1.00 33.01 P
ATOM 25 OP1 C A2495 42.259 136.000 115.715 1.00 34.20 O
ATOM 26 OP2 C A2495 42.315 137.510 113.650 1.00 33.79 O
ATOM 27 O5' C A2495 44.084 137.653 115.357 1.00 33.35 O
TER
ATOM 1 O3' G B2036 54.596 148.942 108.993 1.00 33.45 O
ATOM 2 P G B2037 55.567 148.521 107.788 1.00 34.03 P
ATOM 3 OP1 G B2037 56.588 149.595 107.729 1.00 34.86 O
ATOM 4 OP2 G B2037 54.803 148.165 106.569 1.00 34.91 O
ATOM 5 O5' G B2037 56.286 147.212 108.326 1.00 34.64 O
ATOM 6 C5' G B2037 57.082 147.256 109.518 1.00 32.86 C
ATOM 7 C4' G B2037 56.887 145.993 110.307 1.00 32.75 C
ATOM 8 O4' G B2037 55.490 145.865 110.691 1.00 32.05 O
ATOM 9 C3' G B2037 57.135 144.720 109.526 1.00 33.00 C
ATOM 10 O3' G B2037 58.508 144.417 109.382 1.00 30.75 O
ATOM 11 C2' G B2037 56.370 143.685 110.334 1.00 31.56 C
ATOM 12 O2' G B2037 57.050 143.257 111.493 1.00 34.36 O
ATOM 13 C1' G B2037 55.133 144.490 110.729 1.00 31.60 C
ATOM 14 N9 G B2037 54.043 144.258 109.790 1.00 31.10 N
ATOM 15 C8 G B2037 53.907 144.766 108.519 1.00 31.51 C
ATOM 16 N7 G B2037 52.846 144.324 107.902 1.00 32.48 N
ATOM 17 C5 G B2037 52.238 143.484 108.828 1.00 32.52 C
ATOM 18 C6 G B2037 51.055 142.705 108.729 1.00 31.53 C
ATOM 19 O6 G B2037 50.286 142.595 107.773 1.00 34.79 O
ATOM 20 N1 G B2037 50.807 142.002 109.902 1.00 29.47 N
ATOM 21 C2 G B2037 51.598 142.037 111.024 1.00 29.07 C
ATOM 22 N2 G B2037 51.202 141.288 112.056 1.00 26.61 N
ATOM 23 N3 G B2037 52.699 142.754 111.127 1.00 29.40 N
ATOM 24 C4 G B2037 52.958 143.446 110.001 1.00 30.59 C
ATOM 25 P G B2038 58.944 143.351 108.282 1.00 29.15 P
ATOM 26 OP1 G B2038 60.419 143.350 108.211 1.00 29.75 O
ATOM 27 OP2 G B2038 58.154 143.643 107.067 1.00 29.21 O
ATOM 28 O5' G B2038 58.420 141.994 108.920 1.00 27.92 O
TER
Atoms:
OP1: (40.286,134.692,110.954)
OP2: (40.847,136.850,109.680)
C3': (44.480,135.817,112.660)
C1': (46.398,135.820,111.285)
C5': (43.181,134.222,111.150)
O4': (45.495,134.840,110.795)
C8: (45.380,137.437,109.569)
O2': (46.678,135.397,113.642)
C6: (47.904,139.838,109.000)
C5: (46.995,138.804,109.321)
C4: (47.436,137.843,110.215)
P: (41.148,135.435,109.997)
C4': (44.491,134.559,111.808)
C2': (45.957,136.180,112.709)
C2: (49.400,138.803,110.422)
N1: (49.120,139.800,109.576)
N3: (48.639,137.787,110.810)
N6: (47.635,140.847,108.170)
N7: (45.692,138.534,108.917)
N9: (46.387,136.972,110.383)
O5': (42.653,135.386,110.499)
O3': (43.928,135.569,113.942)
OP2: (40.847,136.850,109.680)
C3': (44.480,135.817,112.660)
C1': (46.398,135.820,111.285)
C5': (43.181,134.222,111.150)
O4': (45.495,134.840,110.795)
C8: (45.380,137.437,109.569)
O2': (46.678,135.397,113.642)
C6: (47.904,139.838,109.000)
C5: (46.995,138.804,109.321)
C4: (47.436,137.843,110.215)
P: (41.148,135.435,109.997)
C4': (44.491,134.559,111.808)
C2': (45.957,136.180,112.709)
C2: (49.400,138.803,110.422)
N1: (49.120,139.800,109.576)
N3: (48.639,137.787,110.810)
N6: (47.635,140.847,108.170)
N7: (45.692,138.534,108.917)
N9: (46.387,136.972,110.383)
O5': (42.653,135.386,110.499)
O3': (43.928,135.569,113.942)
OP1: (56.588,149.595,107.729)
OP2: (54.803,148.165,106.569)
C3': (57.135,144.720,109.526)
C1': (55.133,144.490,110.729)
C5': (57.082,147.256,109.518)
O6: (50.286,142.595,107.773)
O4': (55.490,145.865,110.691)
C8: (53.907,144.766,108.519)
C2: (51.598,142.037,111.024)
C6: (51.055,142.705,108.729)
C5: (52.238,143.484,108.828)
C4: (52.958,143.446,110.001)
P: (55.567,148.521,107.788)
C4': (56.887,145.993,110.307)
C2': (56.370,143.685,110.334)
O2': (57.050,143.257,111.493)
N1: (50.807,142.002,109.902)
N2: (51.202,141.288,112.056)
N3: (52.699,142.754,111.127)
N7: (52.846,144.324,107.902)
N9: (54.043,144.258,109.790)
O5': (56.286,147.212,108.326)
O3': (58.508,144.417,109.382)
OP2: (54.803,148.165,106.569)
C3': (57.135,144.720,109.526)
C1': (55.133,144.490,110.729)
C5': (57.082,147.256,109.518)
O6: (50.286,142.595,107.773)
O4': (55.490,145.865,110.691)
C8: (53.907,144.766,108.519)
C2: (51.598,142.037,111.024)
C6: (51.055,142.705,108.729)
C5: (52.238,143.484,108.828)
C4: (52.958,143.446,110.001)
P: (55.567,148.521,107.788)
C4': (56.887,145.993,110.307)
C2': (56.370,143.685,110.334)
O2': (57.050,143.257,111.493)
N1: (50.807,142.002,109.902)
N2: (51.202,141.288,112.056)
N3: (52.699,142.754,111.127)
N7: (52.846,144.324,107.902)
N9: (54.043,144.258,109.790)
O5': (56.286,147.212,108.326)
O3': (58.508,144.417,109.382)
Image (generated by PyMOL):