ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:S93:S126

Extra

PDB:
ATOM 1 O3' U A 92 47.000 2.053 94.909 1.00133.37 O
ATOM 2 P A A 93 47.135 3.554 94.350 1.00133.37 P
ATOM 3 OP1 A A 93 48.399 4.121 94.876 1.00133.29 O
ATOM 4 OP2 A A 93 45.862 4.266 94.606 1.00133.46 O
ATOM 5 O5' A A 93 47.310 3.358 92.768 1.00133.07 O
ATOM 6 C5' A A 93 47.508 4.495 91.917 1.00132.55 C
ATOM 7 C4' A A 93 47.012 4.268 90.494 1.00132.15 C
ATOM 8 O4' A A 93 46.111 3.127 90.442 1.00132.32 O
ATOM 9 C3' A A 93 46.230 5.435 89.890 1.00131.71 C
ATOM 10 O3' A A 93 47.087 6.287 89.128 1.00130.75 O
ATOM 11 C2' A A 93 45.200 4.736 89.005 1.00132.00 C
ATOM 12 O2' A A 93 45.703 4.373 87.732 1.00131.92 O
ATOM 13 C1' A A 93 44.888 3.486 89.824 1.00132.43 C
ATOM 14 N9 A A 93 43.860 3.672 90.856 1.00132.92 N
ATOM 15 C8 A A 93 43.983 3.389 92.189 1.00133.07 C
ATOM 16 N7 A A 93 42.916 3.649 92.903 1.00133.24 N
ATOM 17 C5 A A 93 42.018 4.142 91.974 1.00133.39 C
ATOM 18 C6 A A 93 40.689 4.605 92.092 1.00133.59 C
ATOM 19 N6 A A 93 40.026 4.637 93.254 1.00133.72 N
ATOM 20 N1 A A 93 40.066 5.031 90.969 1.00133.54 N
ATOM 21 C2 A A 93 40.732 4.997 89.805 1.00133.42 C
ATOM 22 N3 A A 93 41.979 4.584 89.572 1.00133.34 N
ATOM 23 C4 A A 93 42.578 4.164 90.705 1.00133.21 C
ATOM 24 P C A 94 47.169 7.867 89.402 1.00129.90 P
ATOM 25 OP1 C A 94 48.088 8.436 88.391 1.00129.96 O
ATOM 26 OP2 C A 94 47.454 8.071 90.841 1.00129.97 O
ATOM 27 O5' C A 94 45.687 8.391 89.091 1.00128.92 O
TER

ATOM 1 O3' G B 125 29.654 6.230 92.405 1.00 83.99 O
ATOM 2 P G B 126 30.153 4.714 92.572 1.00 86.41 P
ATOM 3 OP1 G B 126 28.969 3.893 92.916 1.00 86.48 O
ATOM 4 OP2 G B 126 31.344 4.671 93.453 1.00 86.06 O
ATOM 5 O5' G B 126 30.597 4.347 91.080 1.00 88.20 O
ATOM 6 C5' G B 126 29.743 4.649 89.975 1.00 91.14 C
ATOM 7 C4' G B 126 30.556 5.102 88.776 1.00 93.40 C
ATOM 8 O4' G B 126 31.407 6.205 89.172 1.00 93.59 O
ATOM 9 C3' G B 126 31.513 4.058 88.219 1.00 95.18 C
ATOM 10 O3' G B 126 30.867 3.247 87.231 1.00 98.26 O
ATOM 11 C2' G B 126 32.650 4.905 87.649 1.00 94.53 C
ATOM 12 O2' G B 126 32.361 5.441 86.370 1.00 94.57 O
ATOM 13 C1' G B 126 32.724 6.030 88.676 1.00 93.65 C
ATOM 14 N9 G B 126 33.646 5.836 89.804 1.00 92.76 N
ATOM 15 C8 G B 126 33.304 5.669 91.125 1.00 92.39 C
ATOM 16 N7 G B 126 34.317 5.534 91.931 1.00 92.16 N
ATOM 17 C5 G B 126 35.416 5.620 91.092 1.00 92.07 C
ATOM 18 C6 G B 126 36.796 5.541 91.404 1.00 91.82 C
ATOM 19 O6 G B 126 37.316 5.376 92.515 1.00 91.53 O
ATOM 20 N1 G B 126 37.594 5.676 90.268 1.00 91.79 N
ATOM 21 C2 G B 126 37.116 5.862 88.988 1.00 92.15 C
ATOM 22 N2 G B 126 38.038 5.970 88.019 1.00 92.17 N
ATOM 23 N3 G B 126 35.821 5.938 88.684 1.00 92.18 N
ATOM 24 C4 G B 126 35.026 5.810 89.780 1.00 92.29 C
ATOM 25 P U B 127 30.413 1.747 87.582 1.00100.45 P
ATOM 26 OP1 U B 127 30.456 0.959 86.327 1.00100.54 O
ATOM 27 OP2 U B 127 29.136 1.836 88.326 1.00100.36 O
ATOM 28 O5' U B 127 31.562 1.224 88.580 1.00102.00 O
TER

Atoms:
OP1: (48.399,4.121,94.876)
OP2: (45.862,4.266,94.606)
C3': (46.230,5.435,89.890)
C1': (44.888,3.486,89.824)
C5': (47.508,4.495,91.917)
O4': (46.111,3.127,90.442)
C8: (43.983,3.389,92.189)
O2': (45.703,4.373,87.732)
C6: (40.689,4.605,92.092)
C5: (42.018,4.142,91.974)
C4: (42.578,4.164,90.705)
P: (47.135,3.554,94.350)
C4': (47.012,4.268,90.494)
C2': (45.200,4.736,89.005)
C2: (40.732,4.997,89.805)
N1: (40.066,5.031,90.969)
N3: (41.979,4.584,89.572)
N6: (40.026,4.637,93.254)
N7: (42.916,3.649,92.903)
N9: (43.860,3.672,90.856)
O5': (47.310,3.358,92.768)
O3': (47.087,6.287,89.128)
OP1: (28.969,3.893,92.916)
OP2: (31.344,4.671,93.453)
C3': (31.513,4.058,88.219)
C1': (32.724,6.030,88.676)
C5': (29.743,4.649,89.975)
O6: (37.316,5.376,92.515)
O4': (31.407,6.205,89.172)
C8: (33.304,5.669,91.125)
C2: (37.116,5.862,88.988)
C6: (36.796,5.541,91.404)
C5: (35.416,5.620,91.092)
C4: (35.026,5.810,89.780)
P: (30.153,4.714,92.572)
C4': (30.556,5.102,88.776)
C2': (32.650,4.905,87.649)
O2': (32.361,5.441,86.370)
N1: (37.594,5.676,90.268)
N2: (38.038,5.970,88.019)
N3: (35.821,5.938,88.684)
N7: (34.317,5.534,91.931)
N9: (33.646,5.836,89.804)
O5': (30.597,4.347,91.080)
O3': (30.867,3.247,87.231)
Image (generated by PyMOL):
PyMOL image
show in jmol