Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1411:A1485
Extra
PDB:
ATOM 1 O3' C A1410 -42.726 82.220 104.334 1.00 33.17 O
ATOM 2 P A A1411 -42.363 81.878 105.853 1.00 32.17 P
ATOM 3 OP1 A A1411 -42.261 80.397 105.955 1.00 32.17 O
ATOM 4 OP2 A A1411 -43.367 82.594 106.708 1.00 32.17 O
ATOM 5 O5' A A1411 -40.922 82.542 106.039 1.00 32.17 O
ATOM 6 C5' A A1411 -39.745 81.829 105.710 1.00 32.17 C
ATOM 7 C4' A A1411 -39.138 82.341 104.434 1.00 32.17 C
ATOM 8 O4' A A1411 -40.107 83.146 103.725 1.00 32.17 O
ATOM 9 C3' A A1411 -37.940 83.257 104.596 1.00 32.17 C
ATOM 10 O3' A A1411 -36.729 82.547 104.788 1.00 32.17 O
ATOM 11 C2' A A1411 -37.972 84.069 103.318 1.00 32.17 C
ATOM 12 O2' A A1411 -37.450 83.328 102.241 1.00 32.17 O
ATOM 13 C1' A A1411 -39.463 84.227 103.100 1.00 32.17 C
ATOM 14 N9 A A1411 -39.967 85.471 103.685 1.00 32.09 N
ATOM 15 C8 A A1411 -41.070 85.653 104.472 1.00 32.09 C
ATOM 16 N7 A A1411 -41.277 86.904 104.808 1.00 32.09 N
ATOM 17 C5 A A1411 -40.233 87.578 104.197 1.00 32.09 C
ATOM 18 C6 A A1411 -39.878 88.930 104.173 1.00 32.09 C
ATOM 19 N6 A A1411 -40.570 89.872 104.807 1.00 32.09 N
ATOM 20 N1 A A1411 -38.786 89.283 103.475 1.00 32.09 N
ATOM 21 C2 A A1411 -38.102 88.334 102.841 1.00 32.09 C
ATOM 22 N3 A A1411 -38.336 87.031 102.789 1.00 32.09 N
ATOM 23 C4 A A1411 -39.424 86.712 103.501 1.00 32.09 C
ATOM 24 P U A1412 -35.953 82.663 106.184 1.00 5.66 P
ATOM 25 OP1 U A1412 -35.005 81.521 106.266 1.00 5.66 O
ATOM 26 OP2 U A1412 -36.981 82.828 107.228 1.00 5.66 O
ATOM 27 O5' U A1412 -35.156 84.021 106.018 1.00 5.66 O
TER
ATOM 1 O3' G B1484 -37.558 100.879 105.624 1.00 28.37 O
ATOM 2 P G B1485 -38.659 100.834 104.452 1.00 32.07 P
ATOM 3 OP1 G B1485 -38.574 102.136 103.741 1.00 32.07 O
ATOM 4 OP2 G B1485 -39.960 100.437 105.069 1.00 32.07 O
ATOM 5 O5' G B1485 -38.127 99.668 103.513 1.00 32.07 O
ATOM 6 C5' G B1485 -37.350 99.948 102.366 1.00 32.07 C
ATOM 7 C4' G B1485 -36.623 98.720 101.903 1.00 32.07 C
ATOM 8 O4' G B1485 -36.318 97.879 103.049 1.00 32.07 O
ATOM 9 C3' G B1485 -37.397 97.798 100.981 1.00 32.07 C
ATOM 10 O3' G B1485 -37.409 98.225 99.645 1.00 32.07 O
ATOM 11 C2' G B1485 -36.692 96.469 101.185 1.00 32.07 C
ATOM 12 O2' G B1485 -35.450 96.422 100.487 1.00 32.07 O
ATOM 13 C1' G B1485 -36.425 96.518 102.688 1.00 32.07 C
ATOM 14 N9 G B1485 -37.541 95.916 103.430 1.00 31.38 N
ATOM 15 C8 G B1485 -38.656 96.481 103.988 1.00 31.38 C
ATOM 16 N7 G B1485 -39.463 95.602 104.512 1.00 31.38 N
ATOM 17 C5 G B1485 -38.843 94.395 104.245 1.00 31.38 C
ATOM 18 C6 G B1485 -39.214 93.074 104.554 1.00 31.38 C
ATOM 19 O6 G B1485 -40.225 92.698 105.157 1.00 31.38 O
ATOM 20 N1 G B1485 -38.266 92.160 104.093 1.00 31.38 N
ATOM 21 C2 G B1485 -37.111 92.471 103.417 1.00 31.38 C
ATOM 22 N2 G B1485 -36.293 91.478 103.034 1.00 31.38 N
ATOM 23 N3 G B1485 -36.773 93.696 103.132 1.00 31.38 N
ATOM 24 C4 G B1485 -37.672 94.580 103.575 1.00 31.38 C
ATOM 25 P G B1486 -38.618 97.793 98.701 1.00 29.71 P
ATOM 26 OP1 G B1486 -38.439 98.507 97.416 1.00 29.71 O
ATOM 27 OP2 G B1486 -39.873 98.006 99.473 1.00 29.71 O
ATOM 28 O5' G B1486 -38.364 96.245 98.494 1.00 29.71 O
TER
ATOM 2 P A A1411 -42.363 81.878 105.853 1.00 32.17 P
ATOM 3 OP1 A A1411 -42.261 80.397 105.955 1.00 32.17 O
ATOM 4 OP2 A A1411 -43.367 82.594 106.708 1.00 32.17 O
ATOM 5 O5' A A1411 -40.922 82.542 106.039 1.00 32.17 O
ATOM 6 C5' A A1411 -39.745 81.829 105.710 1.00 32.17 C
ATOM 7 C4' A A1411 -39.138 82.341 104.434 1.00 32.17 C
ATOM 8 O4' A A1411 -40.107 83.146 103.725 1.00 32.17 O
ATOM 9 C3' A A1411 -37.940 83.257 104.596 1.00 32.17 C
ATOM 10 O3' A A1411 -36.729 82.547 104.788 1.00 32.17 O
ATOM 11 C2' A A1411 -37.972 84.069 103.318 1.00 32.17 C
ATOM 12 O2' A A1411 -37.450 83.328 102.241 1.00 32.17 O
ATOM 13 C1' A A1411 -39.463 84.227 103.100 1.00 32.17 C
ATOM 14 N9 A A1411 -39.967 85.471 103.685 1.00 32.09 N
ATOM 15 C8 A A1411 -41.070 85.653 104.472 1.00 32.09 C
ATOM 16 N7 A A1411 -41.277 86.904 104.808 1.00 32.09 N
ATOM 17 C5 A A1411 -40.233 87.578 104.197 1.00 32.09 C
ATOM 18 C6 A A1411 -39.878 88.930 104.173 1.00 32.09 C
ATOM 19 N6 A A1411 -40.570 89.872 104.807 1.00 32.09 N
ATOM 20 N1 A A1411 -38.786 89.283 103.475 1.00 32.09 N
ATOM 21 C2 A A1411 -38.102 88.334 102.841 1.00 32.09 C
ATOM 22 N3 A A1411 -38.336 87.031 102.789 1.00 32.09 N
ATOM 23 C4 A A1411 -39.424 86.712 103.501 1.00 32.09 C
ATOM 24 P U A1412 -35.953 82.663 106.184 1.00 5.66 P
ATOM 25 OP1 U A1412 -35.005 81.521 106.266 1.00 5.66 O
ATOM 26 OP2 U A1412 -36.981 82.828 107.228 1.00 5.66 O
ATOM 27 O5' U A1412 -35.156 84.021 106.018 1.00 5.66 O
TER
ATOM 1 O3' G B1484 -37.558 100.879 105.624 1.00 28.37 O
ATOM 2 P G B1485 -38.659 100.834 104.452 1.00 32.07 P
ATOM 3 OP1 G B1485 -38.574 102.136 103.741 1.00 32.07 O
ATOM 4 OP2 G B1485 -39.960 100.437 105.069 1.00 32.07 O
ATOM 5 O5' G B1485 -38.127 99.668 103.513 1.00 32.07 O
ATOM 6 C5' G B1485 -37.350 99.948 102.366 1.00 32.07 C
ATOM 7 C4' G B1485 -36.623 98.720 101.903 1.00 32.07 C
ATOM 8 O4' G B1485 -36.318 97.879 103.049 1.00 32.07 O
ATOM 9 C3' G B1485 -37.397 97.798 100.981 1.00 32.07 C
ATOM 10 O3' G B1485 -37.409 98.225 99.645 1.00 32.07 O
ATOM 11 C2' G B1485 -36.692 96.469 101.185 1.00 32.07 C
ATOM 12 O2' G B1485 -35.450 96.422 100.487 1.00 32.07 O
ATOM 13 C1' G B1485 -36.425 96.518 102.688 1.00 32.07 C
ATOM 14 N9 G B1485 -37.541 95.916 103.430 1.00 31.38 N
ATOM 15 C8 G B1485 -38.656 96.481 103.988 1.00 31.38 C
ATOM 16 N7 G B1485 -39.463 95.602 104.512 1.00 31.38 N
ATOM 17 C5 G B1485 -38.843 94.395 104.245 1.00 31.38 C
ATOM 18 C6 G B1485 -39.214 93.074 104.554 1.00 31.38 C
ATOM 19 O6 G B1485 -40.225 92.698 105.157 1.00 31.38 O
ATOM 20 N1 G B1485 -38.266 92.160 104.093 1.00 31.38 N
ATOM 21 C2 G B1485 -37.111 92.471 103.417 1.00 31.38 C
ATOM 22 N2 G B1485 -36.293 91.478 103.034 1.00 31.38 N
ATOM 23 N3 G B1485 -36.773 93.696 103.132 1.00 31.38 N
ATOM 24 C4 G B1485 -37.672 94.580 103.575 1.00 31.38 C
ATOM 25 P G B1486 -38.618 97.793 98.701 1.00 29.71 P
ATOM 26 OP1 G B1486 -38.439 98.507 97.416 1.00 29.71 O
ATOM 27 OP2 G B1486 -39.873 98.006 99.473 1.00 29.71 O
ATOM 28 O5' G B1486 -38.364 96.245 98.494 1.00 29.71 O
TER
Atoms:
OP1: (-42.261,80.397,105.955)
OP2: (-43.367,82.594,106.708)
C3': (-37.940,83.257,104.596)
C1': (-39.463,84.227,103.100)
C5': (-39.745,81.829,105.710)
O4': (-40.107,83.146,103.725)
C8: (-41.070,85.653,104.472)
O2': (-37.450,83.328,102.241)
C6: (-39.878,88.930,104.173)
C5: (-40.233,87.578,104.197)
C4: (-39.424,86.712,103.501)
P: (-42.363,81.878,105.853)
C4': (-39.138,82.341,104.434)
C2': (-37.972,84.069,103.318)
C2: (-38.102,88.334,102.841)
N1: (-38.786,89.283,103.475)
N3: (-38.336,87.031,102.789)
N6: (-40.570,89.872,104.807)
N7: (-41.277,86.904,104.808)
N9: (-39.967,85.471,103.685)
O5': (-40.922,82.542,106.039)
O3': (-36.729,82.547,104.788)
OP2: (-43.367,82.594,106.708)
C3': (-37.940,83.257,104.596)
C1': (-39.463,84.227,103.100)
C5': (-39.745,81.829,105.710)
O4': (-40.107,83.146,103.725)
C8: (-41.070,85.653,104.472)
O2': (-37.450,83.328,102.241)
C6: (-39.878,88.930,104.173)
C5: (-40.233,87.578,104.197)
C4: (-39.424,86.712,103.501)
P: (-42.363,81.878,105.853)
C4': (-39.138,82.341,104.434)
C2': (-37.972,84.069,103.318)
C2: (-38.102,88.334,102.841)
N1: (-38.786,89.283,103.475)
N3: (-38.336,87.031,102.789)
N6: (-40.570,89.872,104.807)
N7: (-41.277,86.904,104.808)
N9: (-39.967,85.471,103.685)
O5': (-40.922,82.542,106.039)
O3': (-36.729,82.547,104.788)
OP1: (-38.574,102.136,103.741)
OP2: (-39.960,100.437,105.069)
C3': (-37.397,97.798,100.981)
C1': (-36.425,96.518,102.688)
C5': (-37.350,99.948,102.366)
O6: (-40.225,92.698,105.157)
O4': (-36.318,97.879,103.049)
C8: (-38.656,96.481,103.988)
C2: (-37.111,92.471,103.417)
C6: (-39.214,93.074,104.554)
C5: (-38.843,94.395,104.245)
C4: (-37.672,94.580,103.575)
P: (-38.659,100.834,104.452)
C4': (-36.623,98.720,101.903)
C2': (-36.692,96.469,101.185)
O2': (-35.450,96.422,100.487)
N1: (-38.266,92.160,104.093)
N2: (-36.293,91.478,103.034)
N3: (-36.773,93.696,103.132)
N7: (-39.463,95.602,104.512)
N9: (-37.541,95.916,103.430)
O5': (-38.127,99.668,103.513)
O3': (-37.409,98.225,99.645)
OP2: (-39.960,100.437,105.069)
C3': (-37.397,97.798,100.981)
C1': (-36.425,96.518,102.688)
C5': (-37.350,99.948,102.366)
O6: (-40.225,92.698,105.157)
O4': (-36.318,97.879,103.049)
C8: (-38.656,96.481,103.988)
C2: (-37.111,92.471,103.417)
C6: (-39.214,93.074,104.554)
C5: (-38.843,94.395,104.245)
C4: (-37.672,94.580,103.575)
P: (-38.659,100.834,104.452)
C4': (-36.623,98.720,101.903)
C2': (-36.692,96.469,101.185)
O2': (-35.450,96.422,100.487)
N1: (-38.266,92.160,104.093)
N2: (-36.293,91.478,103.034)
N3: (-36.773,93.696,103.132)
N7: (-39.463,95.602,104.512)
N9: (-37.541,95.916,103.430)
O5': (-38.127,99.668,103.513)
O3': (-37.409,98.225,99.645)
Image (generated by PyMOL):