ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A497:A507

Extra

PDB:
ATOM 1 O3' C A 496 -61.428 77.065 97.111 1.00 60.56 O
ATOM 2 P C A 497 -61.800 77.502 98.612 1.00 74.10 P
ATOM 3 OP1 C A 497 -62.702 78.679 98.526 1.00 70.95 O
ATOM 4 OP2 C A 497 -60.542 77.607 99.378 1.00 70.02 O
ATOM 5 O5' C A 497 -62.604 76.231 99.178 1.00 48.48 O
ATOM 6 C5' C A 497 -61.856 75.131 99.652 1.00 63.30 C
ATOM 7 C4' C A 497 -62.676 73.855 99.730 1.00 78.69 C
ATOM 8 O4' C A 497 -63.324 73.593 98.458 1.00 89.58 O
ATOM 9 C3' C A 497 -61.878 72.573 99.959 1.00 66.63 C
ATOM 10 O3' C A 497 -61.533 72.386 101.325 1.00 46.25 O
ATOM 11 C2' C A 497 -62.885 71.511 99.533 1.00 67.25 C
ATOM 12 O2' C A 497 -63.739 71.143 100.597 1.00 62.07 O
ATOM 13 C1' C A 497 -63.707 72.223 98.464 1.00 73.67 C
ATOM 14 N1 C A 497 -63.579 71.617 97.110 1.00 58.66 N
ATOM 15 C2 C A 497 -64.055 70.321 96.893 1.00 62.20 C
ATOM 16 O2 C A 497 -64.564 69.702 97.834 1.00 59.83 O
ATOM 17 N3 C A 497 -63.944 69.781 95.655 1.00 71.08 N
ATOM 18 C4 C A 497 -63.391 70.484 94.664 1.00 66.89 C
ATOM 19 N4 C A 497 -63.296 69.915 93.457 1.00 66.91 N
ATOM 20 C5 C A 497 -62.905 71.808 94.872 1.00 66.37 C
ATOM 21 C6 C A 497 -63.018 72.332 96.098 1.00 62.94 C
ATOM 22 P A A 498 -60.343 71.383 101.690 1.00 67.71 P
ATOM 23 OP1 A A 498 -60.384 71.177 103.155 1.00 60.70 O
ATOM 24 OP2 A A 498 -59.132 71.850 100.989 1.00 57.45 O
ATOM 25 O5' A A 498 -60.707 70.010 100.963 1.00 76.58 O
TER

ATOM 1 O3' C B 506 -58.390 73.133 84.921 1.00 54.86 O
ATOM 2 P G B 507 -59.640 73.967 85.463 1.00 50.84 P
ATOM 3 OP1 G B 507 -60.767 73.674 84.545 1.00 61.29 O
ATOM 4 OP2 G B 507 -59.190 75.360 85.689 1.00 57.44 O
ATOM 5 O5' G B 507 -59.984 73.314 86.887 1.00 45.89 O
ATOM 6 C5' G B 507 -60.839 72.183 86.929 1.00 51.11 C
ATOM 7 C4' G B 507 -61.324 71.934 88.341 1.00 48.50 C
ATOM 8 O4' G B 507 -60.176 71.731 89.190 1.00 49.53 O
ATOM 9 C3' G B 507 -62.046 73.082 89.020 1.00 51.51 C
ATOM 10 O3' G B 507 -63.417 73.148 88.624 1.00 64.42 O
ATOM 11 C2' G B 507 -61.918 72.663 90.479 1.00 53.32 C
ATOM 12 O2' G B 507 -62.849 71.659 90.843 1.00 52.29 O
ATOM 13 C1' G B 507 -60.481 72.148 90.504 1.00 54.67 C
ATOM 14 N9 G B 507 -59.539 73.206 90.808 1.00 55.51 N
ATOM 15 C8 G B 507 -58.885 73.973 89.879 1.00 60.72 C
ATOM 16 N7 G B 507 -58.093 74.865 90.405 1.00 63.50 N
ATOM 17 C5 G B 507 -58.242 74.673 91.769 1.00 62.10 C
ATOM 18 C6 G B 507 -57.626 75.365 92.827 1.00 65.21 C
ATOM 19 O6 G B 507 -56.817 76.302 92.736 1.00 57.55 O
ATOM 20 N1 G B 507 -58.044 74.867 94.063 1.00 56.16 N
ATOM 21 C2 G B 507 -58.941 73.839 94.240 1.00 49.12 C
ATOM 22 N2 G B 507 -59.218 73.498 95.505 1.00 49.85 N
ATOM 23 N3 G B 507 -59.525 73.188 93.245 1.00 50.60 N
ATOM 24 C4 G B 507 -59.130 73.658 92.041 1.00 54.06 C
ATOM 25 P G B 508 -64.037 74.573 88.214 1.00 54.18 P
ATOM 26 OP1 G B 508 -65.431 74.365 87.747 1.00 61.53 O
ATOM 27 OP2 G B 508 -63.040 75.253 87.351 1.00 42.22 O
ATOM 28 O5' G B 508 -64.075 75.350 89.607 1.00 46.07 O
TER

Atoms:
C2: (-64.055,70.321,96.893)
OP1: (-62.702,78.679,98.526)
OP2: (-60.542,77.607,99.378)
C4: (-63.391,70.484,94.664)
O5': (-62.604,76.231,99.178)
C3': (-61.878,72.573,99.959)
C1': (-63.707,72.223,98.464)
O4': (-63.324,73.593,98.458)
C5': (-61.856,75.131,99.652)
P: (-61.800,77.502,98.612)
O2: (-64.564,69.702,97.834)
C4': (-62.676,73.855,99.730)
C2': (-62.885,71.511,99.533)
O2': (-63.739,71.143,100.597)
N1: (-63.579,71.617,97.110)
N3: (-63.944,69.781,95.655)
N4: (-63.296,69.915,93.457)
C6: (-63.018,72.332,96.098)
C5: (-62.905,71.808,94.872)
O3': (-61.533,72.386,101.325)
OP1: (-60.767,73.674,84.545)
OP2: (-59.190,75.360,85.689)
C3': (-62.046,73.082,89.020)
C1': (-60.481,72.148,90.504)
C5': (-60.839,72.183,86.929)
O6: (-56.817,76.302,92.736)
O4': (-60.176,71.731,89.190)
C8: (-58.885,73.973,89.879)
C2: (-58.941,73.839,94.240)
C6: (-57.626,75.365,92.827)
C5: (-58.242,74.673,91.769)
C4: (-59.130,73.658,92.041)
P: (-59.640,73.967,85.463)
C4': (-61.324,71.934,88.341)
C2': (-61.918,72.663,90.479)
O2': (-62.849,71.659,90.843)
N1: (-58.044,74.867,94.063)
N2: (-59.218,73.498,95.505)
N3: (-59.525,73.188,93.245)
N7: (-58.093,74.865,90.405)
N9: (-59.539,73.206,90.808)
O5': (-59.984,73.314,86.887)
O3': (-63.417,73.148,88.624)
Image (generated by PyMOL):
PyMOL image
show in jmol