Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:B28:B15
Extra
PDB:
ATOM 1 O3' C A 27 37.349 28.557 6.846 1.00 27.92 O
ATOM 2 P A A 28 37.014 29.389 8.161 1.00 26.59 P
ATOM 3 OP1 A A 28 36.512 30.712 7.756 1.00 28.94 O
ATOM 4 OP2 A A 28 38.160 29.277 9.094 1.00 27.85 O
ATOM 5 O5' A A 28 35.805 28.568 8.751 1.00 26.22 O
ATOM 6 C5' A A 28 34.532 28.633 8.153 1.00 25.04 C
ATOM 7 C4' A A 28 33.592 27.806 8.987 1.00 25.30 C
ATOM 8 O4' A A 28 34.080 26.445 9.071 1.00 25.49 O
ATOM 9 C3' A A 28 33.540 28.239 10.429 1.00 26.02 C
ATOM 10 O3' A A 28 32.683 29.371 10.585 1.00 24.49 O
ATOM 11 C2' A A 28 33.051 26.977 11.124 1.00 26.04 C
ATOM 12 O2' A A 28 31.633 26.794 11.064 1.00 27.12 O
ATOM 13 C1' A A 28 33.800 25.910 10.345 1.00 24.07 C
ATOM 14 N9 A A 28 35.028 25.494 10.979 1.00 22.28 N
ATOM 15 C8 A A 28 36.308 25.865 10.707 1.00 22.39 C
ATOM 16 N7 A A 28 37.209 25.261 11.478 1.00 22.14 N
ATOM 17 C5 A A 28 36.454 24.467 12.306 1.00 22.65 C
ATOM 18 C6 A A 28 36.787 23.567 13.340 1.00 23.51 C
ATOM 19 N6 A A 28 38.032 23.330 13.749 1.00 23.84 N
ATOM 20 N1 A A 28 35.779 22.914 13.949 1.00 23.92 N
ATOM 21 C2 A A 28 34.527 23.155 13.550 1.00 23.98 C
ATOM 22 N3 A A 28 34.089 23.964 12.582 1.00 23.20 N
ATOM 23 C4 A A 28 35.111 24.599 12.003 1.00 23.15 C
ATOM 24 P A A 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 25 OP1 A A 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 26 OP2 A A 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 27 O5' A A 29 32.835 29.825 13.062 1.00 22.14 O
TER
ATOM 1 O3' C B 14 41.808 14.759 19.213 1.00 23.68 O
ATOM 2 P G B 15 41.535 14.360 17.695 1.00 24.54 P
ATOM 3 OP1 G B 15 42.098 13.001 17.542 1.00 25.46 O
ATOM 4 OP2 G B 15 41.961 15.463 16.812 1.00 25.47 O
ATOM 5 O5' G B 15 39.962 14.288 17.539 1.00 25.59 O
ATOM 6 C5' G B 15 39.183 13.481 18.361 1.00 26.37 C
ATOM 7 C4' G B 15 37.746 13.885 18.187 1.00 26.46 C
ATOM 8 O4' G B 15 37.529 15.162 18.825 1.00 27.59 O
ATOM 9 C3' G B 15 37.351 14.124 16.765 1.00 26.98 C
ATOM 10 O3' G B 15 36.975 12.960 16.151 1.00 28.07 O
ATOM 11 C2' G B 15 36.183 15.050 16.936 1.00 28.59 C
ATOM 12 O2' G B 15 35.018 14.361 17.333 1.00 30.62 O
ATOM 13 C1' G B 15 36.727 15.975 18.005 1.00 28.10 C
ATOM 14 N9 G B 15 37.501 17.083 17.423 1.00 28.41 N
ATOM 15 C8 G B 15 38.870 17.215 17.265 1.00 27.04 C
ATOM 16 N7 G B 15 39.219 18.323 16.681 1.00 25.57 N
ATOM 17 C5 G B 15 38.016 18.962 16.431 1.00 27.82 C
ATOM 18 C6 G B 15 37.743 20.202 15.806 1.00 29.23 C
ATOM 19 O6 G B 15 38.553 21.018 15.348 1.00 30.38 O
ATOM 20 N1 G B 15 36.371 20.480 15.740 1.00 29.05 N
ATOM 21 C2 G B 15 35.392 19.641 16.206 1.00 28.70 C
ATOM 22 N2 G B 15 34.130 20.059 16.057 1.00 29.72 N
ATOM 23 N3 G B 15 35.629 18.483 16.789 1.00 28.08 N
ATOM 24 C4 G B 15 36.955 18.210 16.869 1.00 28.48 C
ATOM 25 P G B 16 37.074 12.897 14.558 1.00 30.64 P
ATOM 26 OP1 G B 16 36.587 11.568 14.117 1.00 30.74 O
ATOM 27 OP2 G B 16 38.454 13.338 14.239 1.00 30.58 O
ATOM 28 O5' G B 16 36.020 13.980 14.033 1.00 26.45 O
TER
ATOM 2 P A A 28 37.014 29.389 8.161 1.00 26.59 P
ATOM 3 OP1 A A 28 36.512 30.712 7.756 1.00 28.94 O
ATOM 4 OP2 A A 28 38.160 29.277 9.094 1.00 27.85 O
ATOM 5 O5' A A 28 35.805 28.568 8.751 1.00 26.22 O
ATOM 6 C5' A A 28 34.532 28.633 8.153 1.00 25.04 C
ATOM 7 C4' A A 28 33.592 27.806 8.987 1.00 25.30 C
ATOM 8 O4' A A 28 34.080 26.445 9.071 1.00 25.49 O
ATOM 9 C3' A A 28 33.540 28.239 10.429 1.00 26.02 C
ATOM 10 O3' A A 28 32.683 29.371 10.585 1.00 24.49 O
ATOM 11 C2' A A 28 33.051 26.977 11.124 1.00 26.04 C
ATOM 12 O2' A A 28 31.633 26.794 11.064 1.00 27.12 O
ATOM 13 C1' A A 28 33.800 25.910 10.345 1.00 24.07 C
ATOM 14 N9 A A 28 35.028 25.494 10.979 1.00 22.28 N
ATOM 15 C8 A A 28 36.308 25.865 10.707 1.00 22.39 C
ATOM 16 N7 A A 28 37.209 25.261 11.478 1.00 22.14 N
ATOM 17 C5 A A 28 36.454 24.467 12.306 1.00 22.65 C
ATOM 18 C6 A A 28 36.787 23.567 13.340 1.00 23.51 C
ATOM 19 N6 A A 28 38.032 23.330 13.749 1.00 23.84 N
ATOM 20 N1 A A 28 35.779 22.914 13.949 1.00 23.92 N
ATOM 21 C2 A A 28 34.527 23.155 13.550 1.00 23.98 C
ATOM 22 N3 A A 28 34.089 23.964 12.582 1.00 23.20 N
ATOM 23 C4 A A 28 35.111 24.599 12.003 1.00 23.15 C
ATOM 24 P A A 29 33.089 30.509 11.633 1.00 24.25 P
ATOM 25 OP1 A A 29 32.119 31.601 11.388 1.00 21.16 O
ATOM 26 OP2 A A 29 34.564 30.736 11.603 1.00 24.30 O
ATOM 27 O5' A A 29 32.835 29.825 13.062 1.00 22.14 O
TER
ATOM 1 O3' C B 14 41.808 14.759 19.213 1.00 23.68 O
ATOM 2 P G B 15 41.535 14.360 17.695 1.00 24.54 P
ATOM 3 OP1 G B 15 42.098 13.001 17.542 1.00 25.46 O
ATOM 4 OP2 G B 15 41.961 15.463 16.812 1.00 25.47 O
ATOM 5 O5' G B 15 39.962 14.288 17.539 1.00 25.59 O
ATOM 6 C5' G B 15 39.183 13.481 18.361 1.00 26.37 C
ATOM 7 C4' G B 15 37.746 13.885 18.187 1.00 26.46 C
ATOM 8 O4' G B 15 37.529 15.162 18.825 1.00 27.59 O
ATOM 9 C3' G B 15 37.351 14.124 16.765 1.00 26.98 C
ATOM 10 O3' G B 15 36.975 12.960 16.151 1.00 28.07 O
ATOM 11 C2' G B 15 36.183 15.050 16.936 1.00 28.59 C
ATOM 12 O2' G B 15 35.018 14.361 17.333 1.00 30.62 O
ATOM 13 C1' G B 15 36.727 15.975 18.005 1.00 28.10 C
ATOM 14 N9 G B 15 37.501 17.083 17.423 1.00 28.41 N
ATOM 15 C8 G B 15 38.870 17.215 17.265 1.00 27.04 C
ATOM 16 N7 G B 15 39.219 18.323 16.681 1.00 25.57 N
ATOM 17 C5 G B 15 38.016 18.962 16.431 1.00 27.82 C
ATOM 18 C6 G B 15 37.743 20.202 15.806 1.00 29.23 C
ATOM 19 O6 G B 15 38.553 21.018 15.348 1.00 30.38 O
ATOM 20 N1 G B 15 36.371 20.480 15.740 1.00 29.05 N
ATOM 21 C2 G B 15 35.392 19.641 16.206 1.00 28.70 C
ATOM 22 N2 G B 15 34.130 20.059 16.057 1.00 29.72 N
ATOM 23 N3 G B 15 35.629 18.483 16.789 1.00 28.08 N
ATOM 24 C4 G B 15 36.955 18.210 16.869 1.00 28.48 C
ATOM 25 P G B 16 37.074 12.897 14.558 1.00 30.64 P
ATOM 26 OP1 G B 16 36.587 11.568 14.117 1.00 30.74 O
ATOM 27 OP2 G B 16 38.454 13.338 14.239 1.00 30.58 O
ATOM 28 O5' G B 16 36.020 13.980 14.033 1.00 26.45 O
TER
Atoms:
OP1: (36.512,30.712,7.756)
OP2: (38.160,29.277,9.094)
C3': (33.540,28.239,10.429)
C1': (33.800,25.910,10.345)
C5': (34.532,28.633,8.153)
O4': (34.080,26.445,9.071)
C8: (36.308,25.865,10.707)
O2': (31.633,26.794,11.064)
C6: (36.787,23.567,13.340)
C5: (36.454,24.467,12.306)
C4: (35.111,24.599,12.003)
P: (37.014,29.389,8.161)
C4': (33.592,27.806,8.987)
C2': (33.051,26.977,11.124)
C2: (34.527,23.155,13.550)
N1: (35.779,22.914,13.949)
N3: (34.089,23.964,12.582)
N6: (38.032,23.330,13.749)
N7: (37.209,25.261,11.478)
N9: (35.028,25.494,10.979)
O5': (35.805,28.568,8.751)
O3': (32.683,29.371,10.585)
OP2: (38.160,29.277,9.094)
C3': (33.540,28.239,10.429)
C1': (33.800,25.910,10.345)
C5': (34.532,28.633,8.153)
O4': (34.080,26.445,9.071)
C8: (36.308,25.865,10.707)
O2': (31.633,26.794,11.064)
C6: (36.787,23.567,13.340)
C5: (36.454,24.467,12.306)
C4: (35.111,24.599,12.003)
P: (37.014,29.389,8.161)
C4': (33.592,27.806,8.987)
C2': (33.051,26.977,11.124)
C2: (34.527,23.155,13.550)
N1: (35.779,22.914,13.949)
N3: (34.089,23.964,12.582)
N6: (38.032,23.330,13.749)
N7: (37.209,25.261,11.478)
N9: (35.028,25.494,10.979)
O5': (35.805,28.568,8.751)
O3': (32.683,29.371,10.585)
OP1: (42.098,13.001,17.542)
OP2: (41.961,15.463,16.812)
C3': (37.351,14.124,16.765)
C1': (36.727,15.975,18.005)
C5': (39.183,13.481,18.361)
O6: (38.553,21.018,15.348)
O4': (37.529,15.162,18.825)
C8: (38.870,17.215,17.265)
C2: (35.392,19.641,16.206)
C6: (37.743,20.202,15.806)
C5: (38.016,18.962,16.431)
C4: (36.955,18.210,16.869)
P: (41.535,14.360,17.695)
C4': (37.746,13.885,18.187)
C2': (36.183,15.050,16.936)
O2': (35.018,14.361,17.333)
N1: (36.371,20.480,15.740)
N2: (34.130,20.059,16.057)
N3: (35.629,18.483,16.789)
N7: (39.219,18.323,16.681)
N9: (37.501,17.083,17.423)
O5': (39.962,14.288,17.539)
O3': (36.975,12.960,16.151)
OP2: (41.961,15.463,16.812)
C3': (37.351,14.124,16.765)
C1': (36.727,15.975,18.005)
C5': (39.183,13.481,18.361)
O6: (38.553,21.018,15.348)
O4': (37.529,15.162,18.825)
C8: (38.870,17.215,17.265)
C2: (35.392,19.641,16.206)
C6: (37.743,20.202,15.806)
C5: (38.016,18.962,16.431)
C4: (36.955,18.210,16.869)
P: (41.535,14.360,17.695)
C4': (37.746,13.885,18.187)
C2': (36.183,15.050,16.936)
O2': (35.018,14.361,17.333)
N1: (36.371,20.480,15.740)
N2: (34.130,20.059,16.057)
N3: (35.629,18.483,16.789)
N7: (39.219,18.323,16.681)
N9: (37.501,17.083,17.423)
O5': (39.962,14.288,17.539)
O3': (36.975,12.960,16.151)
Image (generated by PyMOL):