Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2444:A2054
Extra
PDB:
ATOM 1 O3' A A2443 -88.357 -55.663 3.743 1.00 0.01 O
ATOM 2 P A A2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 3 OP1 A A2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 4 OP2 A A2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 5 O5' A A2444 -86.434 -55.500 2.210 1.00 0.01 O
ATOM 6 C5' A A2444 -86.436 -54.119 1.964 1.00 0.01 C
ATOM 7 C4' A A2444 -85.055 -53.582 1.720 1.00 0.01 C
ATOM 8 O4' A A2444 -84.230 -53.777 2.885 1.00 0.01 O
ATOM 9 C3' A A2444 -84.269 -54.233 0.620 1.00 0.01 C
ATOM 10 O3' A A2444 -84.665 -53.806 -0.663 1.00 0.01 O
ATOM 11 C2' A A2444 -82.857 -53.838 0.982 1.00 0.01 C
ATOM 12 O2' A A2444 -82.615 -52.491 0.640 1.00 0.01 O
ATOM 13 C1' A A2444 -82.894 -53.942 2.496 1.00 0.01 C
ATOM 14 N9 A A2444 -82.426 -55.252 2.975 1.00 0.01 N
ATOM 15 C8 A A2444 -83.177 -56.364 3.005 1.00 0.01 C
ATOM 16 N7 A A2444 -82.561 -57.407 3.478 1.00 0.01 N
ATOM 17 C5 A A2444 -81.319 -56.950 3.787 1.00 0.01 C
ATOM 18 C6 A A2444 -80.228 -57.610 4.311 1.00 0.01 C
ATOM 19 N6 A A2444 -80.245 -58.895 4.625 1.00 0.01 N
ATOM 20 N1 A A2444 -79.112 -56.915 4.504 1.00 0.01 N
ATOM 21 C2 A A2444 -79.136 -55.630 4.190 1.00 0.01 C
ATOM 22 N3 A A2444 -80.128 -54.914 3.691 1.00 0.01 N
ATOM 23 C4 A A2444 -81.216 -55.637 3.490 1.00 0.01 C
ATOM 24 P C A2445 -85.025 -54.888 -1.771 1.00 0.01 P
ATOM 25 OP1 C A2445 -85.507 -54.168 -2.958 1.00 0.01 O
ATOM 26 OP2 C A2445 -85.900 -55.876 -1.138 1.00 0.01 O
ATOM 27 O5' C A2445 -83.630 -55.536 -2.067 1.00 0.01 O
TER
ATOM 1 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 2 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 3 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 4 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 5 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
ATOM 6 C5' G B2054 -72.699 -61.836 11.760 1.00 0.01 C
ATOM 7 C4' G B2054 -72.496 -60.357 11.493 1.00 0.01 C
ATOM 8 O4' G B2054 -72.763 -60.102 10.093 1.00 0.01 O
ATOM 9 C3' G B2054 -73.414 -59.406 12.261 1.00 0.01 C
ATOM 10 O3' G B2054 -72.765 -58.145 12.431 1.00 0.01 O
ATOM 11 C2' G B2054 -74.562 -59.233 11.305 1.00 0.01 C
ATOM 12 O2' G B2054 -75.333 -58.081 11.541 1.00 0.01 O
ATOM 13 C1' G B2054 -73.817 -59.170 9.971 1.00 0.01 C
ATOM 14 N9 G B2054 -74.643 -59.535 8.811 1.00 0.01 N
ATOM 15 C8 G B2054 -75.080 -60.780 8.547 1.00 0.01 C
ATOM 16 N7 G B2054 -75.830 -60.822 7.507 1.00 0.01 N
ATOM 17 C5 G B2054 -75.920 -59.550 7.056 1.00 0.01 C
ATOM 18 C6 G B2054 -76.640 -59.049 5.959 1.00 0.01 C
ATOM 19 O6 G B2054 -77.338 -59.683 5.163 1.00 0.01 O
ATOM 20 N1 G B2054 -76.492 -57.674 5.832 1.00 0.01 N
ATOM 21 C2 G B2054 -75.746 -56.911 6.681 1.00 0.01 C
ATOM 22 N2 G B2054 -75.699 -55.608 6.416 1.00 0.01 N
ATOM 23 N3 G B2054 -75.076 -57.400 7.703 1.00 0.01 N
ATOM 24 C4 G B2054 -75.204 -58.727 7.846 1.00 0.01 C
ATOM 25 P A B2055 -73.182 -57.168 13.618 1.00 2.66 P
ATOM 26 OP1 A B2055 -72.237 -57.370 14.694 1.00 2.66 O
ATOM 27 OP2 A B2055 -74.605 -57.369 13.878 1.00 2.66 O
ATOM 28 O5' A B2055 -72.957 -55.762 12.989 1.00 2.66 O
TER
ATOM 2 P A A2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 3 OP1 A A2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 4 OP2 A A2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 5 O5' A A2444 -86.434 -55.500 2.210 1.00 0.01 O
ATOM 6 C5' A A2444 -86.436 -54.119 1.964 1.00 0.01 C
ATOM 7 C4' A A2444 -85.055 -53.582 1.720 1.00 0.01 C
ATOM 8 O4' A A2444 -84.230 -53.777 2.885 1.00 0.01 O
ATOM 9 C3' A A2444 -84.269 -54.233 0.620 1.00 0.01 C
ATOM 10 O3' A A2444 -84.665 -53.806 -0.663 1.00 0.01 O
ATOM 11 C2' A A2444 -82.857 -53.838 0.982 1.00 0.01 C
ATOM 12 O2' A A2444 -82.615 -52.491 0.640 1.00 0.01 O
ATOM 13 C1' A A2444 -82.894 -53.942 2.496 1.00 0.01 C
ATOM 14 N9 A A2444 -82.426 -55.252 2.975 1.00 0.01 N
ATOM 15 C8 A A2444 -83.177 -56.364 3.005 1.00 0.01 C
ATOM 16 N7 A A2444 -82.561 -57.407 3.478 1.00 0.01 N
ATOM 17 C5 A A2444 -81.319 -56.950 3.787 1.00 0.01 C
ATOM 18 C6 A A2444 -80.228 -57.610 4.311 1.00 0.01 C
ATOM 19 N6 A A2444 -80.245 -58.895 4.625 1.00 0.01 N
ATOM 20 N1 A A2444 -79.112 -56.915 4.504 1.00 0.01 N
ATOM 21 C2 A A2444 -79.136 -55.630 4.190 1.00 0.01 C
ATOM 22 N3 A A2444 -80.128 -54.914 3.691 1.00 0.01 N
ATOM 23 C4 A A2444 -81.216 -55.637 3.490 1.00 0.01 C
ATOM 24 P C A2445 -85.025 -54.888 -1.771 1.00 0.01 P
ATOM 25 OP1 C A2445 -85.507 -54.168 -2.958 1.00 0.01 O
ATOM 26 OP2 C A2445 -85.900 -55.876 -1.138 1.00 0.01 O
ATOM 27 O5' C A2445 -83.630 -55.536 -2.067 1.00 0.01 O
TER
ATOM 1 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 2 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 3 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 4 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 5 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
ATOM 6 C5' G B2054 -72.699 -61.836 11.760 1.00 0.01 C
ATOM 7 C4' G B2054 -72.496 -60.357 11.493 1.00 0.01 C
ATOM 8 O4' G B2054 -72.763 -60.102 10.093 1.00 0.01 O
ATOM 9 C3' G B2054 -73.414 -59.406 12.261 1.00 0.01 C
ATOM 10 O3' G B2054 -72.765 -58.145 12.431 1.00 0.01 O
ATOM 11 C2' G B2054 -74.562 -59.233 11.305 1.00 0.01 C
ATOM 12 O2' G B2054 -75.333 -58.081 11.541 1.00 0.01 O
ATOM 13 C1' G B2054 -73.817 -59.170 9.971 1.00 0.01 C
ATOM 14 N9 G B2054 -74.643 -59.535 8.811 1.00 0.01 N
ATOM 15 C8 G B2054 -75.080 -60.780 8.547 1.00 0.01 C
ATOM 16 N7 G B2054 -75.830 -60.822 7.507 1.00 0.01 N
ATOM 17 C5 G B2054 -75.920 -59.550 7.056 1.00 0.01 C
ATOM 18 C6 G B2054 -76.640 -59.049 5.959 1.00 0.01 C
ATOM 19 O6 G B2054 -77.338 -59.683 5.163 1.00 0.01 O
ATOM 20 N1 G B2054 -76.492 -57.674 5.832 1.00 0.01 N
ATOM 21 C2 G B2054 -75.746 -56.911 6.681 1.00 0.01 C
ATOM 22 N2 G B2054 -75.699 -55.608 6.416 1.00 0.01 N
ATOM 23 N3 G B2054 -75.076 -57.400 7.703 1.00 0.01 N
ATOM 24 C4 G B2054 -75.204 -58.727 7.846 1.00 0.01 C
ATOM 25 P A B2055 -73.182 -57.168 13.618 1.00 2.66 P
ATOM 26 OP1 A B2055 -72.237 -57.370 14.694 1.00 2.66 O
ATOM 27 OP2 A B2055 -74.605 -57.369 13.878 1.00 2.66 O
ATOM 28 O5' A B2055 -72.957 -55.762 12.989 1.00 2.66 O
TER
Atoms:
OP1: (-88.708,-55.894,1.329)
OP2: (-87.553,-57.663,2.642)
C3': (-84.269,-54.233,0.620)
C1': (-82.894,-53.942,2.496)
C5': (-86.436,-54.119,1.964)
O4': (-84.230,-53.777,2.885)
C8: (-83.177,-56.364,3.005)
O2': (-82.615,-52.491,0.640)
C6: (-80.228,-57.610,4.311)
C5: (-81.319,-56.950,3.787)
C4: (-81.216,-55.637,3.490)
P: (-87.795,-56.262,2.394)
C4': (-85.055,-53.582,1.720)
C2': (-82.857,-53.838,0.982)
C2: (-79.136,-55.630,4.190)
N1: (-79.112,-56.915,4.504)
N3: (-80.128,-54.914,3.691)
N6: (-80.245,-58.895,4.625)
N7: (-82.561,-57.407,3.478)
N9: (-82.426,-55.252,2.975)
O5': (-86.434,-55.500,2.210)
O3': (-84.665,-53.806,-0.663)
OP2: (-87.553,-57.663,2.642)
C3': (-84.269,-54.233,0.620)
C1': (-82.894,-53.942,2.496)
C5': (-86.436,-54.119,1.964)
O4': (-84.230,-53.777,2.885)
C8: (-83.177,-56.364,3.005)
O2': (-82.615,-52.491,0.640)
C6: (-80.228,-57.610,4.311)
C5: (-81.319,-56.950,3.787)
C4: (-81.216,-55.637,3.490)
P: (-87.795,-56.262,2.394)
C4': (-85.055,-53.582,1.720)
C2': (-82.857,-53.838,0.982)
C2: (-79.136,-55.630,4.190)
N1: (-79.112,-56.915,4.504)
N3: (-80.128,-54.914,3.691)
N6: (-80.245,-58.895,4.625)
N7: (-82.561,-57.407,3.478)
N9: (-82.426,-55.252,2.975)
O5': (-86.434,-55.500,2.210)
O3': (-84.665,-53.806,-0.663)
OP1: (-70.600,-61.459,13.562)
OP2: (-72.245,-61.570,15.441)
C3': (-73.414,-59.406,12.261)
C1': (-73.817,-59.170,9.971)
C5': (-72.699,-61.836,11.760)
O6: (-77.338,-59.683,5.163)
O4': (-72.763,-60.102,10.093)
C8: (-75.080,-60.780,8.547)
C2: (-75.746,-56.911,6.681)
C6: (-76.640,-59.049,5.959)
C5: (-75.920,-59.550,7.056)
C4: (-75.204,-58.727,7.846)
P: (-71.762,-62.090,14.176)
C4': (-72.496,-60.357,11.493)
C2': (-74.562,-59.233,11.305)
O2': (-75.333,-58.081,11.541)
N1: (-76.492,-57.674,5.832)
N2: (-75.699,-55.608,6.416)
N3: (-75.076,-57.400,7.703)
N7: (-75.830,-60.822,7.507)
N9: (-74.643,-59.535,8.811)
O5': (-72.940,-62.128,13.137)
O3': (-72.765,-58.145,12.431)
OP2: (-72.245,-61.570,15.441)
C3': (-73.414,-59.406,12.261)
C1': (-73.817,-59.170,9.971)
C5': (-72.699,-61.836,11.760)
O6: (-77.338,-59.683,5.163)
O4': (-72.763,-60.102,10.093)
C8: (-75.080,-60.780,8.547)
C2: (-75.746,-56.911,6.681)
C6: (-76.640,-59.049,5.959)
C5: (-75.920,-59.550,7.056)
C4: (-75.204,-58.727,7.846)
P: (-71.762,-62.090,14.176)
C4': (-72.496,-60.357,11.493)
C2': (-74.562,-59.233,11.305)
O2': (-75.333,-58.081,11.541)
N1: (-76.492,-57.674,5.832)
N2: (-75.699,-55.608,6.416)
N3: (-75.076,-57.400,7.703)
N7: (-75.830,-60.822,7.507)
N9: (-74.643,-59.535,8.811)
O5': (-72.940,-62.128,13.137)
O3': (-72.765,-58.145,12.431)
Image (generated by PyMOL):