ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIZ:A161:A140

Extra

PDB:
ATOM 1 O3' G A 160 35.647 13.108 5.209 1.00 45.97 O
ATOM 2 P A A 161 34.558 14.263 5.343 1.00 46.89 P
ATOM 3 OP1 A A 161 33.922 14.399 4.001 1.00 47.01 O
ATOM 4 OP2 A A 161 35.155 15.433 6.032 1.00 45.86 O
ATOM 5 O5' A A 161 33.515 13.618 6.360 1.00 46.48 O
ATOM 6 C5' A A 161 33.186 12.228 6.317 1.00 46.06 C
ATOM 7 C4' A A 161 32.993 11.730 7.739 1.00 45.75 C
ATOM 8 O4' A A 161 34.127 12.140 8.551 1.00 45.73 O
ATOM 9 C3' A A 161 31.759 12.271 8.450 1.00 44.53 C
ATOM 10 O3' A A 161 31.239 11.258 9.281 1.00 44.32 O
ATOM 11 C2' A A 161 32.325 13.441 9.247 1.00 44.53 C
ATOM 12 O2' A A 161 31.497 13.819 10.330 1.00 44.36 O
ATOM 13 C1' A A 161 33.663 12.839 9.682 1.00 44.96 C
ATOM 14 N9 A A 161 34.703 13.790 10.068 1.00 45.35 N
ATOM 15 C8 A A 161 35.196 14.842 9.343 1.00 45.66 C
ATOM 16 N7 A A 161 36.130 15.532 9.960 1.00 45.61 N
ATOM 17 C5 A A 161 36.265 14.881 11.178 1.00 45.45 C
ATOM 18 C6 A A 161 37.093 15.112 12.301 1.00 45.29 C
ATOM 19 N6 A A 161 37.992 16.107 12.384 1.00 44.43 N
ATOM 20 N1 A A 161 36.963 14.259 13.342 1.00 45.58 N
ATOM 21 C2 A A 161 36.075 13.260 13.275 1.00 45.08 C
ATOM 22 N3 A A 161 35.245 12.951 12.284 1.00 45.08 N
ATOM 23 C4 A A 161 35.393 13.804 11.257 1.00 45.33 C
ATOM 24 P G A 162 29.659 11.013 9.359 1.00 45.26 P
ATOM 25 OP1 G A 162 29.316 9.891 8.451 1.00 44.58 O
ATOM 26 OP2 G A 162 28.994 12.329 9.204 1.00 43.92 O
ATOM 27 O5' G A 162 29.451 10.459 10.853 1.00 44.27 O
TER

ATOM 1 O3' U B 139 42.861 18.360 22.487 1.00 38.23 O
ATOM 2 P G B 140 43.630 17.019 22.084 1.00 37.47 P
ATOM 3 OP1 G B 140 44.423 16.599 23.265 1.00 36.51 O
ATOM 4 OP2 G B 140 44.292 17.170 20.768 1.00 37.29 O
ATOM 5 O5' G B 140 42.375 16.056 21.859 1.00 37.29 O
ATOM 6 C5' G B 140 41.609 15.669 22.994 1.00 36.81 C
ATOM 7 C4' G B 140 40.290 15.048 22.596 1.00 35.91 C
ATOM 8 O4' G B 140 39.538 15.976 21.776 1.00 35.37 O
ATOM 9 C3' G B 140 40.433 13.819 21.720 1.00 35.14 C
ATOM 10 O3' G B 140 40.754 12.656 22.461 1.00 35.01 O
ATOM 11 C2' G B 140 39.061 13.767 21.061 1.00 35.20 C
ATOM 12 O2' G B 140 38.052 13.214 21.881 1.00 35.32 O
ATOM 13 C1' G B 140 38.839 15.252 20.779 1.00 35.28 C
ATOM 14 N9 G B 140 39.374 15.590 19.464 1.00 34.74 N
ATOM 15 C8 G B 140 40.597 16.150 19.198 1.00 34.84 C
ATOM 16 N7 G B 140 40.819 16.324 17.933 1.00 34.87 N
ATOM 17 C5 G B 140 39.675 15.845 17.315 1.00 34.86 C
ATOM 18 C6 G B 140 39.351 15.773 15.939 1.00 34.56 C
ATOM 19 O6 G B 140 40.032 16.136 14.978 1.00 35.04 O
ATOM 20 N1 G B 140 38.097 15.216 15.721 1.00 34.58 N
ATOM 21 C2 G B 140 37.260 14.780 16.721 1.00 35.15 C
ATOM 22 N2 G B 140 36.091 14.268 16.315 1.00 35.64 N
ATOM 23 N3 G B 140 37.549 14.837 18.023 1.00 34.77 N
ATOM 24 C4 G B 140 38.774 15.381 18.246 1.00 34.68 C
ATOM 25 P U B 141 41.799 11.653 21.787 1.00 34.38 P
ATOM 26 OP1 U B 141 42.238 10.629 22.756 1.00 34.63 O
ATOM 27 OP2 U B 141 42.789 12.503 21.093 1.00 34.98 O
ATOM 28 O5' U B 141 40.951 10.922 20.663 1.00 35.12 O
TER

Atoms:
OP1: (33.922,14.399,4.001)
OP2: (35.155,15.433,6.032)
C3': (31.759,12.271,8.450)
C1': (33.663,12.839,9.682)
C5': (33.186,12.228,6.317)
O4': (34.127,12.140,8.551)
C8: (35.196,14.842,9.343)
O2': (31.497,13.819,10.330)
C6: (37.093,15.112,12.301)
C5: (36.265,14.881,11.178)
C4: (35.393,13.804,11.257)
P: (34.558,14.263,5.343)
C4': (32.993,11.730,7.739)
C2': (32.325,13.441,9.247)
C2: (36.075,13.260,13.275)
N1: (36.963,14.259,13.342)
N3: (35.245,12.951,12.284)
N6: (37.992,16.107,12.384)
N7: (36.130,15.532,9.960)
N9: (34.703,13.790,10.068)
O5': (33.515,13.618,6.360)
O3': (31.239,11.258,9.281)
OP1: (44.423,16.599,23.265)
OP2: (44.292,17.170,20.768)
C3': (40.433,13.819,21.720)
C1': (38.839,15.252,20.779)
C5': (41.609,15.669,22.994)
O6: (40.032,16.136,14.978)
O4': (39.538,15.976,21.776)
C8: (40.597,16.150,19.198)
C2: (37.260,14.780,16.721)
C6: (39.351,15.773,15.939)
C5: (39.675,15.845,17.315)
C4: (38.774,15.381,18.246)
P: (43.630,17.019,22.084)
C4': (40.290,15.048,22.596)
C2': (39.061,13.767,21.061)
O2': (38.052,13.214,21.881)
N1: (38.097,15.216,15.721)
N2: (36.091,14.268,16.315)
N3: (37.549,14.837,18.023)
N7: (40.819,16.324,17.933)
N9: (39.374,15.590,19.464)
O5': (42.375,16.056,21.859)
O3': (40.754,12.656,22.461)
Image (generated by PyMOL):
PyMOL image
show in jmol