Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2869:2907
Extra
PDB:
ATOM 1 O3' U A 868 -42.532 -24.485 124.345 1.00107.70 O
ATOM 2 P A A 869 -41.109 -24.995 123.780 1.00111.48 P
ATOM 3 OP1 A A 869 -41.178 -26.470 123.677 1.00112.86 O
ATOM 4 OP2 A A 869 -40.057 -24.392 124.639 1.00111.60 O
ATOM 5 O5' A A 869 -41.060 -24.359 122.321 1.00109.59 O
ATOM 6 C5' A A 869 -42.083 -24.635 121.377 1.00109.13 C
ATOM 7 C4' A A 869 -42.061 -23.658 120.229 1.00107.24 C
ATOM 8 O4' A A 869 -42.058 -22.303 120.730 1.00106.37 O
ATOM 9 C3' A A 869 -40.851 -23.730 119.321 1.00106.48 C
ATOM 10 O3' A A 869 -40.988 -24.728 118.343 1.00106.68 O
ATOM 11 C2' A A 869 -40.767 -22.331 118.731 1.00104.69 C
ATOM 12 O2' A A 869 -41.623 -22.211 117.606 1.00103.76 O
ATOM 13 C1' A A 869 -41.325 -21.469 119.864 1.00104.83 C
ATOM 14 N9 A A 869 -40.265 -20.819 120.638 1.00104.80 N
ATOM 15 C8 A A 869 -39.998 -20.977 121.971 1.00106.04 C
ATOM 16 N7 A A 869 -38.993 -20.254 122.384 1.00105.68 N
ATOM 17 C5 A A 869 -38.579 -19.585 121.245 1.00104.10 C
ATOM 18 C6 A A 869 -37.542 -18.671 121.027 1.00103.08 C
ATOM 19 N6 A A 869 -36.716 -18.265 122.001 1.00103.52 N
ATOM 20 N1 A A 869 -37.395 -18.188 119.767 1.00101.62 N
ATOM 21 C2 A A 869 -38.240 -18.610 118.813 1.00101.26 C
ATOM 22 N3 A A 869 -39.250 -19.472 118.900 1.00102.13 N
ATOM 23 C4 A A 869 -39.360 -19.921 120.159 1.00103.54 C
ATOM 24 P U A 870 -39.709 -25.526 117.844 1.00 95.27 P
ATOM 25 OP1 U A 870 -40.193 -26.608 116.947 1.00 95.68 O
ATOM 26 OP2 U A 870 -38.920 -25.878 119.055 1.00 96.54 O
ATOM 27 O5' U A 870 -38.933 -24.440 116.998 1.00 93.53 O
TER
ATOM 1 O3' A B 906 -28.547 -11.768 121.681 1.00 91.40 O
ATOM 2 P G B 907 -29.600 -10.676 122.246 1.00 90.13 P
ATOM 3 OP1 G B 907 -28.825 -9.429 122.529 1.00 89.49 O
ATOM 4 OP2 G B 907 -30.360 -11.319 123.355 1.00 91.52 O
ATOM 5 O5' G B 907 -30.570 -10.443 121.009 1.00 88.85 O
ATOM 6 C5' G B 907 -30.074 -9.999 119.756 1.00 87.53 C
ATOM 7 C4' G B 907 -30.955 -10.474 118.638 1.00 86.95 C
ATOM 8 O4' G B 907 -31.011 -11.918 118.667 1.00 88.09 O
ATOM 9 C3' G B 907 -32.408 -10.033 118.724 1.00 86.61 C
ATOM 10 O3' G B 907 -32.620 -8.759 118.154 1.00 85.22 O
ATOM 11 C2' G B 907 -33.157 -11.154 118.016 1.00 86.89 C
ATOM 12 O2' G B 907 -33.110 -10.984 116.604 1.00 85.70 O
ATOM 13 C1' G B 907 -32.312 -12.368 118.384 1.00 88.15 C
ATOM 14 N9 G B 907 -32.830 -13.073 119.573 1.00 89.63 N
ATOM 15 C8 G B 907 -32.541 -12.805 120.896 1.00 90.49 C
ATOM 16 N7 G B 907 -33.142 -13.628 121.727 1.00 91.82 N
ATOM 17 C5 G B 907 -33.855 -14.484 120.895 1.00 91.81 C
ATOM 18 C6 G B 907 -34.694 -15.567 121.225 1.00 92.96 C
ATOM 19 O6 G B 907 -34.955 -15.959 122.364 1.00 94.25 O
ATOM 20 N1 G B 907 -35.229 -16.188 120.092 1.00 92.55 N
ATOM 21 C2 G B 907 -34.980 -15.801 118.795 1.00 91.20 C
ATOM 22 N2 G B 907 -35.578 -16.496 117.814 1.00 91.02 N
ATOM 23 N3 G B 907 -34.200 -14.779 118.478 1.00 90.11 N
ATOM 24 C4 G B 907 -33.675 -14.167 119.566 1.00 90.48 C
ATOM 25 P A B 908 -33.910 -7.896 118.548 1.00 81.01 P
ATOM 26 OP1 A B 908 -33.820 -6.635 117.774 1.00 79.53 O
ATOM 27 OP2 A B 908 -33.967 -7.821 120.017 1.00 82.10 O
ATOM 28 O5' A B 908 -35.115 -8.781 118.010 1.00 81.23 O
TER
ATOM 2 P A A 869 -41.109 -24.995 123.780 1.00111.48 P
ATOM 3 OP1 A A 869 -41.178 -26.470 123.677 1.00112.86 O
ATOM 4 OP2 A A 869 -40.057 -24.392 124.639 1.00111.60 O
ATOM 5 O5' A A 869 -41.060 -24.359 122.321 1.00109.59 O
ATOM 6 C5' A A 869 -42.083 -24.635 121.377 1.00109.13 C
ATOM 7 C4' A A 869 -42.061 -23.658 120.229 1.00107.24 C
ATOM 8 O4' A A 869 -42.058 -22.303 120.730 1.00106.37 O
ATOM 9 C3' A A 869 -40.851 -23.730 119.321 1.00106.48 C
ATOM 10 O3' A A 869 -40.988 -24.728 118.343 1.00106.68 O
ATOM 11 C2' A A 869 -40.767 -22.331 118.731 1.00104.69 C
ATOM 12 O2' A A 869 -41.623 -22.211 117.606 1.00103.76 O
ATOM 13 C1' A A 869 -41.325 -21.469 119.864 1.00104.83 C
ATOM 14 N9 A A 869 -40.265 -20.819 120.638 1.00104.80 N
ATOM 15 C8 A A 869 -39.998 -20.977 121.971 1.00106.04 C
ATOM 16 N7 A A 869 -38.993 -20.254 122.384 1.00105.68 N
ATOM 17 C5 A A 869 -38.579 -19.585 121.245 1.00104.10 C
ATOM 18 C6 A A 869 -37.542 -18.671 121.027 1.00103.08 C
ATOM 19 N6 A A 869 -36.716 -18.265 122.001 1.00103.52 N
ATOM 20 N1 A A 869 -37.395 -18.188 119.767 1.00101.62 N
ATOM 21 C2 A A 869 -38.240 -18.610 118.813 1.00101.26 C
ATOM 22 N3 A A 869 -39.250 -19.472 118.900 1.00102.13 N
ATOM 23 C4 A A 869 -39.360 -19.921 120.159 1.00103.54 C
ATOM 24 P U A 870 -39.709 -25.526 117.844 1.00 95.27 P
ATOM 25 OP1 U A 870 -40.193 -26.608 116.947 1.00 95.68 O
ATOM 26 OP2 U A 870 -38.920 -25.878 119.055 1.00 96.54 O
ATOM 27 O5' U A 870 -38.933 -24.440 116.998 1.00 93.53 O
TER
ATOM 1 O3' A B 906 -28.547 -11.768 121.681 1.00 91.40 O
ATOM 2 P G B 907 -29.600 -10.676 122.246 1.00 90.13 P
ATOM 3 OP1 G B 907 -28.825 -9.429 122.529 1.00 89.49 O
ATOM 4 OP2 G B 907 -30.360 -11.319 123.355 1.00 91.52 O
ATOM 5 O5' G B 907 -30.570 -10.443 121.009 1.00 88.85 O
ATOM 6 C5' G B 907 -30.074 -9.999 119.756 1.00 87.53 C
ATOM 7 C4' G B 907 -30.955 -10.474 118.638 1.00 86.95 C
ATOM 8 O4' G B 907 -31.011 -11.918 118.667 1.00 88.09 O
ATOM 9 C3' G B 907 -32.408 -10.033 118.724 1.00 86.61 C
ATOM 10 O3' G B 907 -32.620 -8.759 118.154 1.00 85.22 O
ATOM 11 C2' G B 907 -33.157 -11.154 118.016 1.00 86.89 C
ATOM 12 O2' G B 907 -33.110 -10.984 116.604 1.00 85.70 O
ATOM 13 C1' G B 907 -32.312 -12.368 118.384 1.00 88.15 C
ATOM 14 N9 G B 907 -32.830 -13.073 119.573 1.00 89.63 N
ATOM 15 C8 G B 907 -32.541 -12.805 120.896 1.00 90.49 C
ATOM 16 N7 G B 907 -33.142 -13.628 121.727 1.00 91.82 N
ATOM 17 C5 G B 907 -33.855 -14.484 120.895 1.00 91.81 C
ATOM 18 C6 G B 907 -34.694 -15.567 121.225 1.00 92.96 C
ATOM 19 O6 G B 907 -34.955 -15.959 122.364 1.00 94.25 O
ATOM 20 N1 G B 907 -35.229 -16.188 120.092 1.00 92.55 N
ATOM 21 C2 G B 907 -34.980 -15.801 118.795 1.00 91.20 C
ATOM 22 N2 G B 907 -35.578 -16.496 117.814 1.00 91.02 N
ATOM 23 N3 G B 907 -34.200 -14.779 118.478 1.00 90.11 N
ATOM 24 C4 G B 907 -33.675 -14.167 119.566 1.00 90.48 C
ATOM 25 P A B 908 -33.910 -7.896 118.548 1.00 81.01 P
ATOM 26 OP1 A B 908 -33.820 -6.635 117.774 1.00 79.53 O
ATOM 27 OP2 A B 908 -33.967 -7.821 120.017 1.00 82.10 O
ATOM 28 O5' A B 908 -35.115 -8.781 118.010 1.00 81.23 O
TER
Atoms:
OP1: (-41.178,-26.470,123.677)
OP2: (-40.057,-24.392,124.639)
C3': (-40.851,-23.730,119.321)
C1': (-41.325,-21.469,119.864)
C5': (-42.083,-24.635,121.377)
O4': (-42.058,-22.303,120.730)
C8: (-39.998,-20.977,121.971)
O2': (-41.623,-22.211,117.606)
C6: (-37.542,-18.671,121.027)
C5: (-38.579,-19.585,121.245)
C4: (-39.360,-19.921,120.159)
P: (-41.109,-24.995,123.780)
C4': (-42.061,-23.658,120.229)
C2': (-40.767,-22.331,118.731)
C2: (-38.240,-18.610,118.813)
N1: (-37.395,-18.188,119.767)
N3: (-39.250,-19.472,118.900)
N6: (-36.716,-18.265,122.001)
N7: (-38.993,-20.254,122.384)
N9: (-40.265,-20.819,120.638)
O5': (-41.060,-24.359,122.321)
O3': (-40.988,-24.728,118.343)
OP2: (-40.057,-24.392,124.639)
C3': (-40.851,-23.730,119.321)
C1': (-41.325,-21.469,119.864)
C5': (-42.083,-24.635,121.377)
O4': (-42.058,-22.303,120.730)
C8: (-39.998,-20.977,121.971)
O2': (-41.623,-22.211,117.606)
C6: (-37.542,-18.671,121.027)
C5: (-38.579,-19.585,121.245)
C4: (-39.360,-19.921,120.159)
P: (-41.109,-24.995,123.780)
C4': (-42.061,-23.658,120.229)
C2': (-40.767,-22.331,118.731)
C2: (-38.240,-18.610,118.813)
N1: (-37.395,-18.188,119.767)
N3: (-39.250,-19.472,118.900)
N6: (-36.716,-18.265,122.001)
N7: (-38.993,-20.254,122.384)
N9: (-40.265,-20.819,120.638)
O5': (-41.060,-24.359,122.321)
O3': (-40.988,-24.728,118.343)
OP1: (-28.825,-9.429,122.529)
OP2: (-30.360,-11.319,123.355)
C3': (-32.408,-10.033,118.724)
C1': (-32.312,-12.368,118.384)
C5': (-30.074,-9.999,119.756)
O6: (-34.955,-15.959,122.364)
O4': (-31.011,-11.918,118.667)
C8: (-32.541,-12.805,120.896)
C2: (-34.980,-15.801,118.795)
C6: (-34.694,-15.567,121.225)
C5: (-33.855,-14.484,120.895)
C4: (-33.675,-14.167,119.566)
P: (-29.600,-10.676,122.246)
C4': (-30.955,-10.474,118.638)
C2': (-33.157,-11.154,118.016)
O2': (-33.110,-10.984,116.604)
N1: (-35.229,-16.188,120.092)
N2: (-35.578,-16.496,117.814)
N3: (-34.200,-14.779,118.478)
N7: (-33.142,-13.628,121.727)
N9: (-32.830,-13.073,119.573)
O5': (-30.570,-10.443,121.009)
O3': (-32.620,-8.759,118.154)
OP2: (-30.360,-11.319,123.355)
C3': (-32.408,-10.033,118.724)
C1': (-32.312,-12.368,118.384)
C5': (-30.074,-9.999,119.756)
O6: (-34.955,-15.959,122.364)
O4': (-31.011,-11.918,118.667)
C8: (-32.541,-12.805,120.896)
C2: (-34.980,-15.801,118.795)
C6: (-34.694,-15.567,121.225)
C5: (-33.855,-14.484,120.895)
C4: (-33.675,-14.167,119.566)
P: (-29.600,-10.676,122.246)
C4': (-30.955,-10.474,118.638)
C2': (-33.157,-11.154,118.016)
O2': (-33.110,-10.984,116.604)
N1: (-35.229,-16.188,120.092)
N2: (-35.578,-16.496,117.814)
N3: (-34.200,-14.779,118.478)
N7: (-33.142,-13.628,121.727)
N9: (-32.830,-13.073,119.573)
O5': (-30.570,-10.443,121.009)
O3': (-32.620,-8.759,118.154)
Image (generated by PyMOL):