Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A476:A452
Extra
PDB:
ATOM 1 O3' C A 475 -18.903 -5.542 102.374 1.00 46.87 O
ATOM 2 P A A 476 -20.088 -4.463 102.344 1.00 56.10 P
ATOM 3 OP1 A A 476 -21.214 -5.059 101.579 1.00 56.10 O
ATOM 4 OP2 A A 476 -19.505 -3.190 101.865 1.00 56.10 O
ATOM 5 O5' A A 476 -20.477 -4.336 103.880 1.00 56.10 O
ATOM 6 C5' A A 476 -21.436 -3.383 104.307 1.00 56.10 C
ATOM 7 C4' A A 476 -20.971 -2.634 105.528 1.00 56.10 C
ATOM 8 O4' A A 476 -19.524 -2.534 105.530 1.00 56.10 O
ATOM 9 C3' A A 476 -21.434 -1.197 105.628 1.00 56.10 C
ATOM 10 O3' A A 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 11 C2' A A 476 -20.404 -0.571 106.552 1.00 56.10 C
ATOM 12 O2' A A 476 -20.698 -0.862 107.911 1.00 56.10 O
ATOM 13 C1' A A 476 -19.129 -1.321 106.142 1.00 56.10 C
ATOM 14 N9 A A 476 -18.305 -0.551 105.181 1.00 55.25 N
ATOM 15 C8 A A 476 -18.166 -0.789 103.836 1.00 55.25 C
ATOM 16 N7 A A 476 -17.364 0.050 103.232 1.00 55.25 N
ATOM 17 C5 A A 476 -16.945 0.897 104.245 1.00 55.25 C
ATOM 18 C6 A A 476 -16.078 1.993 104.243 1.00 55.25 C
ATOM 19 N6 A A 476 -15.463 2.435 103.141 1.00 55.25 N
ATOM 20 N1 A A 476 -15.859 2.622 105.417 1.00 55.25 N
ATOM 21 C2 A A 476 -16.476 2.171 106.508 1.00 55.25 C
ATOM 22 N3 A A 476 -17.312 1.149 106.632 1.00 55.25 N
ATOM 23 C4 A A 476 -17.507 0.543 105.451 1.00 55.25 C
ATOM 24 P U A 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 25 OP1 U A 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 26 OP2 U A 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 27 O5' U A 477 -23.196 0.654 104.351 1.00 51.38 O
TER
ATOM 1 O3' G B 451 -9.739 11.325 104.204 1.00 37.39 O
ATOM 2 P G B 452 -8.559 10.362 104.701 1.00 52.17 P
ATOM 3 OP1 G B 452 -7.355 11.220 104.889 1.00 52.17 O
ATOM 4 OP2 G B 452 -8.489 9.229 103.748 1.00 52.17 O
ATOM 5 O5' G B 452 -9.090 9.851 106.111 1.00 52.17 O
ATOM 6 C5' G B 452 -9.470 10.771 107.119 1.00 52.17 C
ATOM 7 C4' G B 452 -10.546 10.199 107.997 1.00 52.17 C
ATOM 8 O4' G B 452 -11.812 10.214 107.285 1.00 52.17 O
ATOM 9 C3' G B 452 -10.369 8.739 108.395 1.00 52.17 C
ATOM 10 O3' G B 452 -9.466 8.549 109.472 1.00 52.17 O
ATOM 11 C2' G B 452 -11.797 8.309 108.695 1.00 52.17 C
ATOM 12 O2' G B 452 -12.234 8.808 109.951 1.00 52.17 O
ATOM 13 C1' G B 452 -12.548 9.047 107.593 1.00 52.17 C
ATOM 14 N9 G B 452 -12.665 8.225 106.375 1.00 51.31 N
ATOM 15 C8 G B 452 -11.933 8.252 105.210 1.00 51.31 C
ATOM 16 N7 G B 452 -12.334 7.360 104.348 1.00 51.31 N
ATOM 17 C5 G B 452 -13.380 6.700 104.991 1.00 51.31 C
ATOM 18 C6 G B 452 -14.229 5.630 104.588 1.00 51.31 C
ATOM 19 O6 G B 452 -14.226 5.008 103.521 1.00 51.31 O
ATOM 20 N1 G B 452 -15.162 5.290 105.569 1.00 51.31 N
ATOM 21 C2 G B 452 -15.272 5.898 106.793 1.00 51.31 C
ATOM 22 N2 G B 452 -16.217 5.454 107.630 1.00 51.31 N
ATOM 23 N3 G B 452 -14.494 6.888 107.179 1.00 51.31 N
ATOM 24 C4 G B 452 -13.587 7.229 106.240 1.00 51.31 C
ATOM 25 P G B 453 -8.699 7.151 109.640 1.00 39.06 P
ATOM 26 OP1 G B 453 -7.882 7.242 110.875 1.00 39.06 O
ATOM 27 OP2 G B 453 -8.019 6.880 108.357 1.00 39.06 O
ATOM 28 O5' G B 453 -9.895 6.121 109.862 1.00 39.06 O
TER
ATOM 2 P A A 476 -20.088 -4.463 102.344 1.00 56.10 P
ATOM 3 OP1 A A 476 -21.214 -5.059 101.579 1.00 56.10 O
ATOM 4 OP2 A A 476 -19.505 -3.190 101.865 1.00 56.10 O
ATOM 5 O5' A A 476 -20.477 -4.336 103.880 1.00 56.10 O
ATOM 6 C5' A A 476 -21.436 -3.383 104.307 1.00 56.10 C
ATOM 7 C4' A A 476 -20.971 -2.634 105.528 1.00 56.10 C
ATOM 8 O4' A A 476 -19.524 -2.534 105.530 1.00 56.10 O
ATOM 9 C3' A A 476 -21.434 -1.197 105.628 1.00 56.10 C
ATOM 10 O3' A A 476 -22.761 -1.078 106.086 1.00 56.10 O
ATOM 11 C2' A A 476 -20.404 -0.571 106.552 1.00 56.10 C
ATOM 12 O2' A A 476 -20.698 -0.862 107.911 1.00 56.10 O
ATOM 13 C1' A A 476 -19.129 -1.321 106.142 1.00 56.10 C
ATOM 14 N9 A A 476 -18.305 -0.551 105.181 1.00 55.25 N
ATOM 15 C8 A A 476 -18.166 -0.789 103.836 1.00 55.25 C
ATOM 16 N7 A A 476 -17.364 0.050 103.232 1.00 55.25 N
ATOM 17 C5 A A 476 -16.945 0.897 104.245 1.00 55.25 C
ATOM 18 C6 A A 476 -16.078 1.993 104.243 1.00 55.25 C
ATOM 19 N6 A A 476 -15.463 2.435 103.141 1.00 55.25 N
ATOM 20 N1 A A 476 -15.859 2.622 105.417 1.00 55.25 N
ATOM 21 C2 A A 476 -16.476 2.171 106.508 1.00 55.25 C
ATOM 22 N3 A A 476 -17.312 1.149 106.632 1.00 55.25 N
ATOM 23 C4 A A 476 -17.507 0.543 105.451 1.00 55.25 C
ATOM 24 P U A 477 -23.898 -0.587 105.067 1.00 51.38 P
ATOM 25 OP1 U A 477 -25.060 -0.120 105.880 1.00 51.38 O
ATOM 26 OP2 U A 477 -24.105 -1.689 104.086 1.00 51.38 O
ATOM 27 O5' U A 477 -23.196 0.654 104.351 1.00 51.38 O
TER
ATOM 1 O3' G B 451 -9.739 11.325 104.204 1.00 37.39 O
ATOM 2 P G B 452 -8.559 10.362 104.701 1.00 52.17 P
ATOM 3 OP1 G B 452 -7.355 11.220 104.889 1.00 52.17 O
ATOM 4 OP2 G B 452 -8.489 9.229 103.748 1.00 52.17 O
ATOM 5 O5' G B 452 -9.090 9.851 106.111 1.00 52.17 O
ATOM 6 C5' G B 452 -9.470 10.771 107.119 1.00 52.17 C
ATOM 7 C4' G B 452 -10.546 10.199 107.997 1.00 52.17 C
ATOM 8 O4' G B 452 -11.812 10.214 107.285 1.00 52.17 O
ATOM 9 C3' G B 452 -10.369 8.739 108.395 1.00 52.17 C
ATOM 10 O3' G B 452 -9.466 8.549 109.472 1.00 52.17 O
ATOM 11 C2' G B 452 -11.797 8.309 108.695 1.00 52.17 C
ATOM 12 O2' G B 452 -12.234 8.808 109.951 1.00 52.17 O
ATOM 13 C1' G B 452 -12.548 9.047 107.593 1.00 52.17 C
ATOM 14 N9 G B 452 -12.665 8.225 106.375 1.00 51.31 N
ATOM 15 C8 G B 452 -11.933 8.252 105.210 1.00 51.31 C
ATOM 16 N7 G B 452 -12.334 7.360 104.348 1.00 51.31 N
ATOM 17 C5 G B 452 -13.380 6.700 104.991 1.00 51.31 C
ATOM 18 C6 G B 452 -14.229 5.630 104.588 1.00 51.31 C
ATOM 19 O6 G B 452 -14.226 5.008 103.521 1.00 51.31 O
ATOM 20 N1 G B 452 -15.162 5.290 105.569 1.00 51.31 N
ATOM 21 C2 G B 452 -15.272 5.898 106.793 1.00 51.31 C
ATOM 22 N2 G B 452 -16.217 5.454 107.630 1.00 51.31 N
ATOM 23 N3 G B 452 -14.494 6.888 107.179 1.00 51.31 N
ATOM 24 C4 G B 452 -13.587 7.229 106.240 1.00 51.31 C
ATOM 25 P G B 453 -8.699 7.151 109.640 1.00 39.06 P
ATOM 26 OP1 G B 453 -7.882 7.242 110.875 1.00 39.06 O
ATOM 27 OP2 G B 453 -8.019 6.880 108.357 1.00 39.06 O
ATOM 28 O5' G B 453 -9.895 6.121 109.862 1.00 39.06 O
TER
Atoms:
OP1: (-21.214,-5.059,101.579)
OP2: (-19.505,-3.190,101.865)
C3': (-21.434,-1.197,105.628)
C1': (-19.129,-1.321,106.142)
C5': (-21.436,-3.383,104.307)
O4': (-19.524,-2.534,105.530)
C8: (-18.166,-0.789,103.836)
O2': (-20.698,-0.862,107.911)
C6: (-16.078,1.993,104.243)
C5: (-16.945,0.897,104.245)
C4: (-17.507,0.543,105.451)
P: (-20.088,-4.463,102.344)
C4': (-20.971,-2.634,105.528)
C2': (-20.404,-0.571,106.552)
C2: (-16.476,2.171,106.508)
N1: (-15.859,2.622,105.417)
N3: (-17.312,1.149,106.632)
N6: (-15.463,2.435,103.141)
N7: (-17.364,0.050,103.232)
N9: (-18.305,-0.551,105.181)
O5': (-20.477,-4.336,103.880)
O3': (-22.761,-1.078,106.086)
OP2: (-19.505,-3.190,101.865)
C3': (-21.434,-1.197,105.628)
C1': (-19.129,-1.321,106.142)
C5': (-21.436,-3.383,104.307)
O4': (-19.524,-2.534,105.530)
C8: (-18.166,-0.789,103.836)
O2': (-20.698,-0.862,107.911)
C6: (-16.078,1.993,104.243)
C5: (-16.945,0.897,104.245)
C4: (-17.507,0.543,105.451)
P: (-20.088,-4.463,102.344)
C4': (-20.971,-2.634,105.528)
C2': (-20.404,-0.571,106.552)
C2: (-16.476,2.171,106.508)
N1: (-15.859,2.622,105.417)
N3: (-17.312,1.149,106.632)
N6: (-15.463,2.435,103.141)
N7: (-17.364,0.050,103.232)
N9: (-18.305,-0.551,105.181)
O5': (-20.477,-4.336,103.880)
O3': (-22.761,-1.078,106.086)
OP1: (-7.355,11.220,104.889)
OP2: (-8.489,9.229,103.748)
C3': (-10.369,8.739,108.395)
C1': (-12.548,9.047,107.593)
C5': (-9.470,10.771,107.119)
O6: (-14.226,5.008,103.521)
O4': (-11.812,10.214,107.285)
C8: (-11.933,8.252,105.210)
C2: (-15.272,5.898,106.793)
C6: (-14.229,5.630,104.588)
C5: (-13.380,6.700,104.991)
C4: (-13.587,7.229,106.240)
P: (-8.559,10.362,104.701)
C4': (-10.546,10.199,107.997)
C2': (-11.797,8.309,108.695)
O2': (-12.234,8.808,109.951)
N1: (-15.162,5.290,105.569)
N2: (-16.217,5.454,107.630)
N3: (-14.494,6.888,107.179)
N7: (-12.334,7.360,104.348)
N9: (-12.665,8.225,106.375)
O5': (-9.090,9.851,106.111)
O3': (-9.466,8.549,109.472)
OP2: (-8.489,9.229,103.748)
C3': (-10.369,8.739,108.395)
C1': (-12.548,9.047,107.593)
C5': (-9.470,10.771,107.119)
O6: (-14.226,5.008,103.521)
O4': (-11.812,10.214,107.285)
C8: (-11.933,8.252,105.210)
C2: (-15.272,5.898,106.793)
C6: (-14.229,5.630,104.588)
C5: (-13.380,6.700,104.991)
C4: (-13.587,7.229,106.240)
P: (-8.559,10.362,104.701)
C4': (-10.546,10.199,107.997)
C2': (-11.797,8.309,108.695)
O2': (-12.234,8.808,109.951)
N1: (-15.162,5.290,105.569)
N2: (-16.217,5.454,107.630)
N3: (-14.494,6.888,107.179)
N7: (-12.334,7.360,104.348)
N9: (-12.665,8.225,106.375)
O5': (-9.090,9.851,106.111)
O3': (-9.466,8.549,109.472)
Image (generated by PyMOL):