ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:53052:53068

Extra

PDB:
ATOM 1 O3' C A3051 119.121 56.636 224.291 1.00 48.42 O
ATOM 2 P A A3052 120.568 57.249 223.949 1.00 47.51 P
ATOM 3 OP1 A A3052 121.330 56.203 223.217 1.00 47.27 O
ATOM 4 OP2 A A3052 121.107 57.784 225.221 1.00 47.38 O
ATOM 5 O5' A A3052 120.214 58.438 222.962 1.00 47.98 O
ATOM 6 C5' A A3052 120.126 58.245 221.568 1.00 48.16 C
ATOM 7 C4' A A3052 119.802 59.543 220.885 1.00 48.62 C
ATOM 8 O4' A A3052 118.639 60.137 221.526 1.00 48.83 O
ATOM 9 C3' A A3052 120.857 60.640 220.991 1.00 48.73 C
ATOM 10 O3' A A3052 121.901 60.493 220.068 1.00 48.70 O
ATOM 11 C2' A A3052 120.050 61.895 220.765 1.00 49.19 C
ATOM 12 O2' A A3052 119.786 62.069 219.380 1.00 49.50 O
ATOM 13 C1' A A3052 118.745 61.553 221.501 1.00 49.17 C
ATOM 14 N9 A A3052 118.808 62.034 222.884 1.00 49.08 N
ATOM 15 C8 A A3052 119.066 61.309 223.999 1.00 48.70 C
ATOM 16 N7 A A3052 119.144 62.028 225.088 1.00 48.72 N
ATOM 17 C5 A A3052 118.962 63.313 224.658 1.00 49.13 C
ATOM 18 C6 A A3052 118.967 64.524 225.336 1.00 49.36 C
ATOM 19 N6 A A3052 119.139 64.651 226.622 1.00 49.20 N
ATOM 20 N1 A A3052 118.764 65.637 224.635 1.00 49.79 N
ATOM 21 C2 A A3052 118.559 65.523 223.304 1.00 49.97 C
ATOM 22 N3 A A3052 118.530 64.430 222.518 1.00 49.80 N
ATOM 23 C4 A A3052 118.758 63.335 223.289 1.00 49.36 C
ATOM 24 P U A3053 123.436 60.633 220.540 1.00 51.00 P
ATOM 25 OP1 U A3053 124.291 60.245 219.361 1.00 51.00 O
ATOM 26 OP2 U A3053 123.581 59.872 221.833 1.00 50.59 O
ATOM 27 O5' U A3053 123.565 62.195 220.810 1.00 51.33 O
TER

ATOM 1 O3' A B3067 123.973 73.943 231.869 1.00 45.98 O
ATOM 2 P G B3068 122.432 74.236 232.093 1.00 48.43 P
ATOM 3 OP1 G B3068 122.336 75.580 232.682 1.00 48.82 O
ATOM 4 OP2 G B3068 121.863 73.100 232.827 1.00 48.09 O
ATOM 5 O5' G B3068 121.880 74.230 230.618 1.00 48.65 O
ATOM 6 C5' G B3068 122.547 74.953 229.595 1.00 48.90 C
ATOM 7 C4' G B3068 122.024 74.582 228.224 1.00 49.00 C
ATOM 8 O4' G B3068 122.409 73.221 227.893 1.00 48.56 O
ATOM 9 C3' G B3068 120.517 74.629 228.057 1.00 49.24 C
ATOM 10 O3' G B3068 120.077 75.930 227.670 1.00 49.77 O
ATOM 11 C2' G B3068 120.242 73.572 226.984 1.00 49.07 C
ATOM 12 O2' G B3068 120.291 74.170 225.699 1.00 49.42 O
ATOM 13 C1' G B3068 121.430 72.605 227.112 1.00 48.59 C
ATOM 14 N9 G B3068 121.064 71.316 227.744 1.00 48.17 N
ATOM 15 C8 G B3068 121.126 70.984 229.073 1.00 47.91 C
ATOM 16 N7 G B3068 120.733 69.757 229.324 1.00 47.57 N
ATOM 17 C5 G B3068 120.399 69.213 228.091 1.00 47.60 C
ATOM 18 C6 G B3068 119.900 67.908 227.731 1.00 47.34 C
ATOM 19 O6 G B3068 119.640 66.929 228.458 1.00 47.01 O
ATOM 20 N1 G B3068 119.703 67.801 226.365 1.00 47.50 N
ATOM 21 C2 G B3068 119.936 68.831 225.470 1.00 47.88 C
ATOM 22 N2 G B3068 119.680 68.594 224.182 1.00 48.02 N
ATOM 23 N3 G B3068 120.388 70.040 225.783 1.00 48.13 N
ATOM 24 C4 G B3068 120.605 70.171 227.112 1.00 47.97 C
ATOM 25 P A B3069 119.396 76.935 228.728 1.00 62.70 P
ATOM 26 OP1 A B3069 120.142 78.210 228.640 1.00 63.03 O
ATOM 27 OP2 A B3069 119.337 76.244 230.035 1.00 62.34 O
ATOM 28 O5' A B3069 117.910 77.112 228.151 1.00 63.04 O
TER

Atoms:
OP1: (121.330,56.203,223.217)
OP2: (121.107,57.784,225.221)
C3': (120.857,60.640,220.991)
C1': (118.745,61.553,221.501)
C5': (120.126,58.245,221.568)
O4': (118.639,60.137,221.526)
C8: (119.066,61.309,223.999)
O2': (119.786,62.069,219.380)
C6: (118.967,64.524,225.336)
C5: (118.962,63.313,224.658)
C4: (118.758,63.335,223.289)
P: (120.568,57.249,223.949)
C4': (119.802,59.543,220.885)
C2': (120.050,61.895,220.765)
C2: (118.559,65.523,223.304)
N1: (118.764,65.637,224.635)
N3: (118.530,64.430,222.518)
N6: (119.139,64.651,226.622)
N7: (119.144,62.028,225.088)
N9: (118.808,62.034,222.884)
O5': (120.214,58.438,222.962)
O3': (121.901,60.493,220.068)
OP1: (122.336,75.580,232.682)
OP2: (121.863,73.100,232.827)
C3': (120.517,74.629,228.057)
C1': (121.430,72.605,227.112)
C5': (122.547,74.953,229.595)
O6: (119.640,66.929,228.458)
O4': (122.409,73.221,227.893)
C8: (121.126,70.984,229.073)
C2: (119.936,68.831,225.470)
C6: (119.900,67.908,227.731)
C5: (120.399,69.213,228.091)
C4: (120.605,70.171,227.112)
P: (122.432,74.236,232.093)
C4': (122.024,74.582,228.224)
C2': (120.242,73.572,226.984)
O2': (120.291,74.170,225.699)
N1: (119.703,67.801,226.365)
N2: (119.680,68.594,224.182)
N3: (120.388,70.040,225.783)
N7: (120.733,69.757,229.324)
N9: (121.064,71.316,227.744)
O5': (121.880,74.230,230.618)
O3': (120.077,75.930,227.670)
Image (generated by PyMOL):
PyMOL image
show in jmol