ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 157D:A8:B3

Extra

PDB:
ATOM 1 O3' U A 7 17.556 10.369 -4.590 1.00 29.43 O
ATOM 2 P A A 8 18.682 9.932 -5.626 1.00 26.34 P
ATOM 3 OP1 A A 8 19.172 11.255 -6.110 1.00 51.49 O
ATOM 4 OP2 A A 8 18.145 9.098 -6.747 1.00 38.89 O
ATOM 5 O5' A A 8 19.751 9.171 -4.737 1.00 27.04 O
ATOM 6 C5' A A 8 20.853 9.891 -4.154 1.00 10.59 C
ATOM 7 C4' A A 8 21.299 9.046 -2.970 1.00 13.28 C
ATOM 8 O4' A A 8 20.118 8.527 -2.341 1.00 19.60 O
ATOM 9 C3' A A 8 22.043 7.776 -3.329 1.00 17.04 C
ATOM 10 O3' A A 8 23.349 7.914 -3.818 1.00 26.17 O
ATOM 11 C2' A A 8 21.879 6.986 -2.066 1.00 16.32 C
ATOM 12 O2' A A 8 22.776 7.350 -1.072 1.00 23.57 O
ATOM 13 C1' A A 8 20.429 7.281 -1.699 1.00 17.99 C
ATOM 14 N9 A A 8 19.658 6.121 -2.188 1.00 17.35 N
ATOM 15 C8 A A 8 18.899 5.968 -3.306 1.00 12.71 C
ATOM 16 N7 A A 8 18.365 4.781 -3.428 1.00 14.78 N
ATOM 17 C5 A A 8 18.782 4.106 -2.292 1.00 12.98 C
ATOM 18 C6 A A 8 18.545 2.790 -1.852 1.00 3.53 C
ATOM 19 N6 A A 8 17.767 1.935 -2.504 1.00 14.45 N
ATOM 20 N1 A A 8 19.142 2.465 -0.685 1.00 16.49 N
ATOM 21 C2 A A 8 19.904 3.330 0.025 1.00 16.17 C
ATOM 22 N3 A A 8 20.177 4.580 -0.354 1.00 22.69 N
ATOM 23 C4 A A 8 19.588 4.906 -1.526 1.00 16.09 C
ATOM 24 P G A 9 23.986 6.886 -4.857 1.00 21.00 P
ATOM 25 OP1 G A 9 25.233 7.551 -5.328 1.00 21.92 O
ATOM 26 OP2 G A 9 22.998 6.723 -5.970 1.00 24.00 O
ATOM 27 O5' G A 9 24.246 5.577 -4.019 1.00 15.97 O
TER

ATOM 1 O3' C B 2 16.126 -8.596 -0.828 1.00 27.59 O
ATOM 2 P G B 3 14.976 -8.039 0.176 1.00 19.16 P
ATOM 3 OP1 G B 3 14.371 -9.237 0.764 1.00 29.17 O
ATOM 4 OP2 G B 3 14.072 -7.187 -0.627 1.00 21.28 O
ATOM 5 O5' G B 3 15.797 -7.184 1.235 1.00 22.47 O
ATOM 6 C5' G B 3 16.035 -7.620 2.570 1.00 17.12 C
ATOM 7 C4' G B 3 17.026 -6.578 3.077 1.00 19.25 C
ATOM 8 O4' G B 3 17.862 -6.249 1.984 1.00 19.02 O
ATOM 9 C3' G B 3 16.378 -5.231 3.387 1.00 17.98 C
ATOM 10 O3' G B 3 15.757 -5.235 4.686 1.00 32.27 O
ATOM 11 C2' G B 3 17.680 -4.414 3.421 1.00 13.10 C
ATOM 12 O2' G B 3 18.336 -4.933 4.559 1.00 16.78 O
ATOM 13 C1' G B 3 18.282 -4.892 2.119 1.00 15.44 C
ATOM 14 N9 G B 3 17.725 -4.082 1.003 1.00 19.66 N
ATOM 15 C8 G B 3 16.729 -4.376 0.104 1.00 12.22 C
ATOM 16 N7 G B 3 16.496 -3.424 -0.741 1.00 8.53 N
ATOM 17 C5 G B 3 17.396 -2.420 -0.408 1.00 14.04 C
ATOM 18 C6 G B 3 17.636 -1.129 -0.955 1.00 11.77 C
ATOM 19 O6 G B 3 17.070 -0.557 -1.882 1.00 14.96 O
ATOM 20 N1 G B 3 18.621 -0.422 -0.323 1.00 17.87 N
ATOM 21 C2 G B 3 19.308 -0.928 0.744 1.00 17.60 C
ATOM 22 N2 G B 3 20.235 -0.118 1.279 1.00 17.02 N
ATOM 23 N3 G B 3 19.105 -2.115 1.296 1.00 16.00 N
ATOM 24 C4 G B 3 18.143 -2.811 0.672 1.00 13.67 C
ATOM 25 P A B 4 14.537 -4.186 4.972 1.00 25.57 P
ATOM 26 OP1 A B 4 13.971 -4.694 6.248 1.00 36.07 O
ATOM 27 OP2 A B 4 13.638 -4.165 3.792 1.00 27.40 O
ATOM 28 O5' A B 4 15.278 -2.787 5.165 1.00 21.14 O
TER

Atoms:
OP1: (19.172,11.255,-6.110)
OP2: (18.145,9.098,-6.747)
C3': (22.043,7.776,-3.329)
C1': (20.429,7.281,-1.699)
C5': (20.853,9.891,-4.154)
O4': (20.118,8.527,-2.341)
C8: (18.899,5.968,-3.306)
O2': (22.776,7.350,-1.072)
C6: (18.545,2.790,-1.852)
C5: (18.782,4.106,-2.292)
C4: (19.588,4.906,-1.526)
P: (18.682,9.932,-5.626)
C4': (21.299,9.046,-2.970)
C2': (21.879,6.986,-2.066)
C2: (19.904,3.330,0.025)
N1: (19.142,2.465,-0.685)
N3: (20.177,4.580,-0.354)
N6: (17.767,1.935,-2.504)
N7: (18.365,4.781,-3.428)
N9: (19.658,6.121,-2.188)
O5': (19.751,9.171,-4.737)
O3': (23.349,7.914,-3.818)
OP1: (14.371,-9.237,0.764)
OP2: (14.072,-7.187,-0.627)
C3': (16.378,-5.231,3.387)
C1': (18.282,-4.892,2.119)
C5': (16.035,-7.620,2.570)
O6: (17.070,-0.557,-1.882)
O4': (17.862,-6.249,1.984)
C8: (16.729,-4.376,0.104)
C2: (19.308,-0.928,0.744)
C6: (17.636,-1.129,-0.955)
C5: (17.396,-2.420,-0.408)
C4: (18.143,-2.811,0.672)
P: (14.976,-8.039,0.176)
C4': (17.026,-6.578,3.077)
C2': (17.680,-4.414,3.421)
O2': (18.336,-4.933,4.559)
N1: (18.621,-0.422,-0.323)
N2: (20.235,-0.118,1.279)
N3: (19.105,-2.115,1.296)
N7: (16.496,-3.424,-0.741)
N9: (17.725,-4.082,1.003)
O5': (15.797,-7.184,1.235)
O3': (15.757,-5.235,4.686)
Image (generated by PyMOL):
PyMOL image
show in jmol