Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y99:B15:A8
Extra
PDB:
ATOM 1 O3' C A 14 -2.311 -12.267 26.521 1.00 41.10 O
ATOM 2 P A A 15 -1.106 -12.586 27.540 1.00 43.21 P
ATOM 3 OP1 A A 15 -1.426 -13.886 28.178 1.00 45.76 O
ATOM 4 OP2 A A 15 -0.859 -11.392 28.394 1.00 40.74 O
ATOM 5 O5' A A 15 0.157 -12.784 26.593 1.00 37.52 O
ATOM 6 C5' A A 15 0.188 -13.855 25.640 1.00 43.83 C
ATOM 7 C4' A A 15 1.325 -13.657 24.671 1.00 44.22 C
ATOM 8 O4' A A 15 1.139 -12.405 23.961 1.00 44.73 O
ATOM 9 C3' A A 15 2.700 -13.520 25.297 1.00 43.68 C
ATOM 10 O3' A A 15 3.250 -14.801 25.589 1.00 45.46 O
ATOM 11 C2' A A 15 3.472 -12.788 24.208 1.00 42.12 C
ATOM 12 O2' A A 15 3.871 -13.648 23.166 1.00 38.51 O
ATOM 13 C1' A A 15 2.404 -11.827 23.676 1.00 41.41 C
ATOM 14 N9 A A 15 2.457 -10.504 24.301 1.00 37.49 N
ATOM 15 C8 A A 15 1.661 -10.000 25.300 1.00 35.02 C
ATOM 16 N7 A A 15 1.968 -8.776 25.652 1.00 34.82 N
ATOM 17 C5 A A 15 3.037 -8.451 24.828 1.00 33.78 C
ATOM 18 C6 A A 15 3.823 -7.292 24.707 1.00 33.81 C
ATOM 19 N6 A A 15 3.648 -6.195 25.449 1.00 29.74 N
ATOM 20 N1 A A 15 4.813 -7.298 23.787 1.00 32.67 N
ATOM 21 C2 A A 15 4.993 -8.397 23.048 1.00 33.63 C
ATOM 22 N3 A A 15 4.321 -9.545 23.069 1.00 34.97 N
ATOM 23 C4 A A 15 3.345 -9.506 23.991 1.00 34.34 C
ATOM 24 P C A 16 4.325 -14.963 26.774 1.00 40.42 P
ATOM 25 OP1 C A 16 4.770 -16.376 26.746 1.00 43.54 O
ATOM 26 OP2 C A 16 3.748 -14.403 28.022 1.00 37.33 O
ATOM 27 O5' C A 16 5.541 -14.051 26.302 1.00 38.44 O
TER
ATOM 1 O3' A B 7 8.168 3.644 19.339 0.50 44.21 O
ATOM 2 P G B 8 7.454 2.257 18.960 0.50 39.11 P
ATOM 3 OP1 G B 8 7.459 2.120 17.482 0.50 39.77 O
ATOM 4 OP2 G B 8 6.168 2.236 19.692 0.50 40.18 O
ATOM 5 O5' G B 8 8.407 1.136 19.576 0.50 39.96 O
ATOM 6 C5' G B 8 9.813 1.092 19.249 0.50 41.78 C
ATOM 7 C4' G B 8 10.356 -0.309 19.431 0.50 41.05 C
ATOM 8 O4' G B 8 10.275 -0.694 20.827 0.50 40.96 O
ATOM 9 C3' G B 8 9.596 -1.401 18.700 0.50 41.88 C
ATOM 10 O3' G B 8 10.020 -1.506 17.345 0.50 41.70 O
ATOM 11 C2' G B 8 9.952 -2.648 19.498 0.50 42.10 C
ATOM 12 O2' G B 8 11.211 -3.180 19.144 0.50 45.54 O
ATOM 13 C1' G B 8 10.022 -2.087 20.920 0.50 41.11 C
ATOM 14 N9 G B 8 8.806 -2.286 21.700 0.50 39.67 N
ATOM 15 C8 G B 8 7.946 -1.318 22.163 0.50 38.75 C
ATOM 16 N7 G B 8 6.960 -1.804 22.867 0.50 36.71 N
ATOM 17 C5 G B 8 7.177 -3.174 22.862 0.50 37.34 C
ATOM 18 C6 G B 8 6.441 -4.224 23.469 0.50 35.51 C
ATOM 19 O6 G B 8 5.420 -4.148 24.162 0.50 32.18 O
ATOM 20 N1 G B 8 7.010 -5.466 23.206 0.50 37.77 N
ATOM 21 C2 G B 8 8.142 -5.673 22.456 0.50 40.69 C
ATOM 22 N2 G B 8 8.527 -6.949 22.303 0.50 40.73 N
ATOM 23 N3 G B 8 8.844 -4.702 21.894 0.50 40.04 N
ATOM 24 C4 G B 8 8.307 -3.488 22.136 0.50 38.71 C
TER
ATOM 2 P A A 15 -1.106 -12.586 27.540 1.00 43.21 P
ATOM 3 OP1 A A 15 -1.426 -13.886 28.178 1.00 45.76 O
ATOM 4 OP2 A A 15 -0.859 -11.392 28.394 1.00 40.74 O
ATOM 5 O5' A A 15 0.157 -12.784 26.593 1.00 37.52 O
ATOM 6 C5' A A 15 0.188 -13.855 25.640 1.00 43.83 C
ATOM 7 C4' A A 15 1.325 -13.657 24.671 1.00 44.22 C
ATOM 8 O4' A A 15 1.139 -12.405 23.961 1.00 44.73 O
ATOM 9 C3' A A 15 2.700 -13.520 25.297 1.00 43.68 C
ATOM 10 O3' A A 15 3.250 -14.801 25.589 1.00 45.46 O
ATOM 11 C2' A A 15 3.472 -12.788 24.208 1.00 42.12 C
ATOM 12 O2' A A 15 3.871 -13.648 23.166 1.00 38.51 O
ATOM 13 C1' A A 15 2.404 -11.827 23.676 1.00 41.41 C
ATOM 14 N9 A A 15 2.457 -10.504 24.301 1.00 37.49 N
ATOM 15 C8 A A 15 1.661 -10.000 25.300 1.00 35.02 C
ATOM 16 N7 A A 15 1.968 -8.776 25.652 1.00 34.82 N
ATOM 17 C5 A A 15 3.037 -8.451 24.828 1.00 33.78 C
ATOM 18 C6 A A 15 3.823 -7.292 24.707 1.00 33.81 C
ATOM 19 N6 A A 15 3.648 -6.195 25.449 1.00 29.74 N
ATOM 20 N1 A A 15 4.813 -7.298 23.787 1.00 32.67 N
ATOM 21 C2 A A 15 4.993 -8.397 23.048 1.00 33.63 C
ATOM 22 N3 A A 15 4.321 -9.545 23.069 1.00 34.97 N
ATOM 23 C4 A A 15 3.345 -9.506 23.991 1.00 34.34 C
ATOM 24 P C A 16 4.325 -14.963 26.774 1.00 40.42 P
ATOM 25 OP1 C A 16 4.770 -16.376 26.746 1.00 43.54 O
ATOM 26 OP2 C A 16 3.748 -14.403 28.022 1.00 37.33 O
ATOM 27 O5' C A 16 5.541 -14.051 26.302 1.00 38.44 O
TER
ATOM 1 O3' A B 7 8.168 3.644 19.339 0.50 44.21 O
ATOM 2 P G B 8 7.454 2.257 18.960 0.50 39.11 P
ATOM 3 OP1 G B 8 7.459 2.120 17.482 0.50 39.77 O
ATOM 4 OP2 G B 8 6.168 2.236 19.692 0.50 40.18 O
ATOM 5 O5' G B 8 8.407 1.136 19.576 0.50 39.96 O
ATOM 6 C5' G B 8 9.813 1.092 19.249 0.50 41.78 C
ATOM 7 C4' G B 8 10.356 -0.309 19.431 0.50 41.05 C
ATOM 8 O4' G B 8 10.275 -0.694 20.827 0.50 40.96 O
ATOM 9 C3' G B 8 9.596 -1.401 18.700 0.50 41.88 C
ATOM 10 O3' G B 8 10.020 -1.506 17.345 0.50 41.70 O
ATOM 11 C2' G B 8 9.952 -2.648 19.498 0.50 42.10 C
ATOM 12 O2' G B 8 11.211 -3.180 19.144 0.50 45.54 O
ATOM 13 C1' G B 8 10.022 -2.087 20.920 0.50 41.11 C
ATOM 14 N9 G B 8 8.806 -2.286 21.700 0.50 39.67 N
ATOM 15 C8 G B 8 7.946 -1.318 22.163 0.50 38.75 C
ATOM 16 N7 G B 8 6.960 -1.804 22.867 0.50 36.71 N
ATOM 17 C5 G B 8 7.177 -3.174 22.862 0.50 37.34 C
ATOM 18 C6 G B 8 6.441 -4.224 23.469 0.50 35.51 C
ATOM 19 O6 G B 8 5.420 -4.148 24.162 0.50 32.18 O
ATOM 20 N1 G B 8 7.010 -5.466 23.206 0.50 37.77 N
ATOM 21 C2 G B 8 8.142 -5.673 22.456 0.50 40.69 C
ATOM 22 N2 G B 8 8.527 -6.949 22.303 0.50 40.73 N
ATOM 23 N3 G B 8 8.844 -4.702 21.894 0.50 40.04 N
ATOM 24 C4 G B 8 8.307 -3.488 22.136 0.50 38.71 C
TER
Atoms:
OP1: (-1.426,-13.886,28.178)
OP2: (-0.859,-11.392,28.394)
C3': (2.700,-13.520,25.297)
C1': (2.404,-11.827,23.676)
C5': (0.188,-13.855,25.640)
O4': (1.139,-12.405,23.961)
C8: (1.661,-10.000,25.300)
O2': (3.871,-13.648,23.166)
C6: (3.823,-7.292,24.707)
C5: (3.037,-8.451,24.828)
C4: (3.345,-9.506,23.991)
P: (-1.106,-12.586,27.540)
C4': (1.325,-13.657,24.671)
C2': (3.472,-12.788,24.208)
C2: (4.993,-8.397,23.048)
N1: (4.813,-7.298,23.787)
N3: (4.321,-9.545,23.069)
N6: (3.648,-6.195,25.449)
N7: (1.968,-8.776,25.652)
N9: (2.457,-10.504,24.301)
O5': (0.157,-12.784,26.593)
O3': (3.250,-14.801,25.589)
OP2: (-0.859,-11.392,28.394)
C3': (2.700,-13.520,25.297)
C1': (2.404,-11.827,23.676)
C5': (0.188,-13.855,25.640)
O4': (1.139,-12.405,23.961)
C8: (1.661,-10.000,25.300)
O2': (3.871,-13.648,23.166)
C6: (3.823,-7.292,24.707)
C5: (3.037,-8.451,24.828)
C4: (3.345,-9.506,23.991)
P: (-1.106,-12.586,27.540)
C4': (1.325,-13.657,24.671)
C2': (3.472,-12.788,24.208)
C2: (4.993,-8.397,23.048)
N1: (4.813,-7.298,23.787)
N3: (4.321,-9.545,23.069)
N6: (3.648,-6.195,25.449)
N7: (1.968,-8.776,25.652)
N9: (2.457,-10.504,24.301)
O5': (0.157,-12.784,26.593)
O3': (3.250,-14.801,25.589)
OP1: (7.459,2.120,17.482)
OP2: (6.168,2.236,19.692)
C3': (9.596,-1.401,18.700)
C1': (10.022,-2.087,20.920)
C5': (9.813,1.092,19.249)
O6: (5.420,-4.148,24.162)
O4': (10.275,-0.694,20.827)
C8: (7.946,-1.318,22.163)
C2: (8.142,-5.673,22.456)
C6: (6.441,-4.224,23.469)
C5: (7.177,-3.174,22.862)
C4: (8.307,-3.488,22.136)
P: (7.454,2.257,18.960)
C4': (10.356,-0.309,19.431)
C2': (9.952,-2.648,19.498)
O2': (11.211,-3.180,19.144)
N1: (7.010,-5.466,23.206)
N2: (8.527,-6.949,22.303)
N3: (8.844,-4.702,21.894)
N7: (6.960,-1.804,22.867)
N9: (8.806,-2.286,21.700)
O5': (8.407,1.136,19.576)
O3': (10.020,-1.506,17.345)
OP2: (6.168,2.236,19.692)
C3': (9.596,-1.401,18.700)
C1': (10.022,-2.087,20.920)
C5': (9.813,1.092,19.249)
O6: (5.420,-4.148,24.162)
O4': (10.275,-0.694,20.827)
C8: (7.946,-1.318,22.163)
C2: (8.142,-5.673,22.456)
C6: (6.441,-4.224,23.469)
C5: (7.177,-3.174,22.862)
C4: (8.307,-3.488,22.136)
P: (7.454,2.257,18.960)
C4': (10.356,-0.309,19.431)
C2': (9.952,-2.648,19.498)
O2': (11.211,-3.180,19.144)
N1: (7.010,-5.466,23.206)
N2: (8.527,-6.949,22.303)
N3: (8.844,-4.702,21.894)
N7: (6.960,-1.804,22.867)
N9: (8.806,-2.286,21.700)
O5': (8.407,1.136,19.576)
O3': (10.020,-1.506,17.345)
Image (generated by PyMOL):