Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2408:A2375
Extra
PDB:
ATOM 1 O3' U A2407 -109.742 -35.943 39.640 1.00 80.17 O
ATOM 2 P C A2408 -108.450 -36.738 40.154 1.00 64.70 P
ATOM 3 OP1 C A2408 -107.635 -35.858 41.030 1.00 45.12 O
ATOM 4 OP2 C A2408 -107.880 -37.318 38.917 1.00 56.85 O
ATOM 5 O5' C A2408 -109.066 -37.928 41.030 1.00 63.58 O
ATOM 6 C5' C A2408 -108.693 -38.103 42.398 1.00 63.26 C
ATOM 7 C4' C A2408 -107.759 -39.285 42.606 1.00 58.06 C
ATOM 8 O4' C A2408 -107.515 -39.457 44.028 1.00 50.54 O
ATOM 9 C3' C A2408 -108.263 -40.657 42.156 1.00 60.86 C
ATOM 10 O3' C A2408 -108.089 -40.826 40.748 1.00 51.20 O
ATOM 11 C2' C A2408 -107.345 -41.568 42.961 1.00 56.14 C
ATOM 12 O2' C A2408 -106.051 -41.656 42.404 1.00 60.85 O
ATOM 13 C1' C A2408 -107.274 -40.829 44.291 1.00 52.25 C
ATOM 14 N1 C A2408 -108.297 -41.320 45.213 1.00 58.69 N
ATOM 15 C2 C A2408 -108.031 -42.445 45.979 1.00 63.79 C
ATOM 16 O2 C A2408 -106.933 -42.994 45.866 1.00 68.91 O
ATOM 17 N3 C A2408 -108.980 -42.897 46.826 1.00 65.34 N
ATOM 18 C4 C A2408 -110.150 -42.271 46.912 1.00 71.38 C
ATOM 19 N4 C A2408 -111.061 -42.755 47.764 1.00 77.41 N
ATOM 20 C5 C A2408 -110.443 -41.120 46.128 1.00 74.62 C
ATOM 21 C6 C A2408 -109.493 -40.684 45.299 1.00 70.23 C
ATOM 22 P A A2409 -108.168 -42.251 40.028 1.00 35.44 P
ATOM 23 OP1 A A2409 -108.966 -43.184 40.855 1.00 55.29 O
ATOM 24 OP2 A A2409 -106.785 -42.594 39.615 1.00 45.39 O
ATOM 25 O5' A A2409 -108.998 -41.924 38.706 1.00 46.62 O
TER
ATOM 1 O3' U B2374 -120.462 -43.021 46.602 1.00 61.70 O
ATOM 2 P G B2375 -119.702 -42.585 47.919 1.00 76.70 P
ATOM 3 OP1 G B2375 -120.269 -43.375 49.033 1.00 82.52 O
ATOM 4 OP2 G B2375 -119.720 -41.114 47.946 1.00 69.12 O
ATOM 5 O5' G B2375 -118.187 -43.027 47.661 1.00 95.14 O
ATOM 6 C5' G B2375 -117.805 -44.385 47.850 1.00 88.36 C
ATOM 7 C4' G B2375 -116.315 -44.542 47.642 1.00 63.20 C
ATOM 8 O4' G B2375 -116.010 -44.154 46.282 1.00 51.95 O
ATOM 9 C3' G B2375 -115.468 -43.656 48.553 1.00 65.35 C
ATOM 10 O3' G B2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 11 C2' G B2375 -114.927 -42.600 47.599 1.00 61.98 C
ATOM 12 O2' G B2375 -113.659 -42.118 47.988 1.00 61.94 O
ATOM 13 C1' G B2375 -114.797 -43.441 46.345 1.00 65.07 C
ATOM 14 N9 G B2375 -114.573 -42.680 45.121 1.00 72.79 N
ATOM 15 C8 G B2375 -115.393 -41.747 44.535 1.00 71.73 C
ATOM 16 N7 G B2375 -114.903 -41.246 43.436 1.00 64.44 N
ATOM 17 C5 G B2375 -113.680 -41.888 43.291 1.00 65.34 C
ATOM 18 C6 G B2375 -112.689 -41.761 42.285 1.00 67.46 C
ATOM 19 O6 G B2375 -112.706 -41.026 41.290 1.00 83.11 O
ATOM 20 N1 G B2375 -111.592 -42.598 42.502 1.00 59.57 N
ATOM 21 C2 G B2375 -111.472 -43.452 43.564 1.00 65.55 C
ATOM 22 N2 G B2375 -110.342 -44.163 43.588 1.00 74.62 N
ATOM 23 N3 G B2375 -112.386 -43.587 44.519 1.00 61.28 N
ATOM 24 C4 G B2375 -113.460 -42.774 44.318 1.00 70.86 C
ATOM 25 P A B2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 26 OP1 A B2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 27 OP2 A B2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 28 O5' A B2376 -113.765 -45.886 51.102 1.00 53.61 O
TER
ATOM 2 P C A2408 -108.450 -36.738 40.154 1.00 64.70 P
ATOM 3 OP1 C A2408 -107.635 -35.858 41.030 1.00 45.12 O
ATOM 4 OP2 C A2408 -107.880 -37.318 38.917 1.00 56.85 O
ATOM 5 O5' C A2408 -109.066 -37.928 41.030 1.00 63.58 O
ATOM 6 C5' C A2408 -108.693 -38.103 42.398 1.00 63.26 C
ATOM 7 C4' C A2408 -107.759 -39.285 42.606 1.00 58.06 C
ATOM 8 O4' C A2408 -107.515 -39.457 44.028 1.00 50.54 O
ATOM 9 C3' C A2408 -108.263 -40.657 42.156 1.00 60.86 C
ATOM 10 O3' C A2408 -108.089 -40.826 40.748 1.00 51.20 O
ATOM 11 C2' C A2408 -107.345 -41.568 42.961 1.00 56.14 C
ATOM 12 O2' C A2408 -106.051 -41.656 42.404 1.00 60.85 O
ATOM 13 C1' C A2408 -107.274 -40.829 44.291 1.00 52.25 C
ATOM 14 N1 C A2408 -108.297 -41.320 45.213 1.00 58.69 N
ATOM 15 C2 C A2408 -108.031 -42.445 45.979 1.00 63.79 C
ATOM 16 O2 C A2408 -106.933 -42.994 45.866 1.00 68.91 O
ATOM 17 N3 C A2408 -108.980 -42.897 46.826 1.00 65.34 N
ATOM 18 C4 C A2408 -110.150 -42.271 46.912 1.00 71.38 C
ATOM 19 N4 C A2408 -111.061 -42.755 47.764 1.00 77.41 N
ATOM 20 C5 C A2408 -110.443 -41.120 46.128 1.00 74.62 C
ATOM 21 C6 C A2408 -109.493 -40.684 45.299 1.00 70.23 C
ATOM 22 P A A2409 -108.168 -42.251 40.028 1.00 35.44 P
ATOM 23 OP1 A A2409 -108.966 -43.184 40.855 1.00 55.29 O
ATOM 24 OP2 A A2409 -106.785 -42.594 39.615 1.00 45.39 O
ATOM 25 O5' A A2409 -108.998 -41.924 38.706 1.00 46.62 O
TER
ATOM 1 O3' U B2374 -120.462 -43.021 46.602 1.00 61.70 O
ATOM 2 P G B2375 -119.702 -42.585 47.919 1.00 76.70 P
ATOM 3 OP1 G B2375 -120.269 -43.375 49.033 1.00 82.52 O
ATOM 4 OP2 G B2375 -119.720 -41.114 47.946 1.00 69.12 O
ATOM 5 O5' G B2375 -118.187 -43.027 47.661 1.00 95.14 O
ATOM 6 C5' G B2375 -117.805 -44.385 47.850 1.00 88.36 C
ATOM 7 C4' G B2375 -116.315 -44.542 47.642 1.00 63.20 C
ATOM 8 O4' G B2375 -116.010 -44.154 46.282 1.00 51.95 O
ATOM 9 C3' G B2375 -115.468 -43.656 48.553 1.00 65.35 C
ATOM 10 O3' G B2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 11 C2' G B2375 -114.927 -42.600 47.599 1.00 61.98 C
ATOM 12 O2' G B2375 -113.659 -42.118 47.988 1.00 61.94 O
ATOM 13 C1' G B2375 -114.797 -43.441 46.345 1.00 65.07 C
ATOM 14 N9 G B2375 -114.573 -42.680 45.121 1.00 72.79 N
ATOM 15 C8 G B2375 -115.393 -41.747 44.535 1.00 71.73 C
ATOM 16 N7 G B2375 -114.903 -41.246 43.436 1.00 64.44 N
ATOM 17 C5 G B2375 -113.680 -41.888 43.291 1.00 65.34 C
ATOM 18 C6 G B2375 -112.689 -41.761 42.285 1.00 67.46 C
ATOM 19 O6 G B2375 -112.706 -41.026 41.290 1.00 83.11 O
ATOM 20 N1 G B2375 -111.592 -42.598 42.502 1.00 59.57 N
ATOM 21 C2 G B2375 -111.472 -43.452 43.564 1.00 65.55 C
ATOM 22 N2 G B2375 -110.342 -44.163 43.588 1.00 74.62 N
ATOM 23 N3 G B2375 -112.386 -43.587 44.519 1.00 61.28 N
ATOM 24 C4 G B2375 -113.460 -42.774 44.318 1.00 70.86 C
ATOM 25 P A B2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 26 OP1 A B2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 27 OP2 A B2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 28 O5' A B2376 -113.765 -45.886 51.102 1.00 53.61 O
TER
Atoms:
C2: (-108.031,-42.445,45.979)
OP1: (-107.635,-35.858,41.030)
OP2: (-107.880,-37.318,38.917)
C4: (-110.150,-42.271,46.912)
O5': (-109.066,-37.928,41.030)
C3': (-108.263,-40.657,42.156)
C1': (-107.274,-40.829,44.291)
O4': (-107.515,-39.457,44.028)
C5': (-108.693,-38.103,42.398)
P: (-108.450,-36.738,40.154)
O2: (-106.933,-42.994,45.866)
C4': (-107.759,-39.285,42.606)
C2': (-107.345,-41.568,42.961)
O2': (-106.051,-41.656,42.404)
N1: (-108.297,-41.320,45.213)
N3: (-108.980,-42.897,46.826)
N4: (-111.061,-42.755,47.764)
C6: (-109.493,-40.684,45.299)
C5: (-110.443,-41.120,46.128)
O3': (-108.089,-40.826,40.748)
OP1: (-107.635,-35.858,41.030)
OP2: (-107.880,-37.318,38.917)
C4: (-110.150,-42.271,46.912)
O5': (-109.066,-37.928,41.030)
C3': (-108.263,-40.657,42.156)
C1': (-107.274,-40.829,44.291)
O4': (-107.515,-39.457,44.028)
C5': (-108.693,-38.103,42.398)
P: (-108.450,-36.738,40.154)
O2: (-106.933,-42.994,45.866)
C4': (-107.759,-39.285,42.606)
C2': (-107.345,-41.568,42.961)
O2': (-106.051,-41.656,42.404)
N1: (-108.297,-41.320,45.213)
N3: (-108.980,-42.897,46.826)
N4: (-111.061,-42.755,47.764)
C6: (-109.493,-40.684,45.299)
C5: (-110.443,-41.120,46.128)
O3': (-108.089,-40.826,40.748)
OP1: (-120.269,-43.375,49.033)
OP2: (-119.720,-41.114,47.946)
C3': (-115.468,-43.656,48.553)
C1': (-114.797,-43.441,46.345)
C5': (-117.805,-44.385,47.850)
O6: (-112.706,-41.026,41.290)
O4': (-116.010,-44.154,46.282)
C8: (-115.393,-41.747,44.535)
C2: (-111.472,-43.452,43.564)
C6: (-112.689,-41.761,42.285)
C5: (-113.680,-41.888,43.291)
C4: (-113.460,-42.774,44.318)
P: (-119.702,-42.585,47.919)
C4': (-116.315,-44.542,47.642)
C2': (-114.927,-42.600,47.599)
O2': (-113.659,-42.118,47.988)
N1: (-111.592,-42.598,42.502)
N2: (-110.342,-44.163,43.588)
N3: (-112.386,-43.587,44.519)
N7: (-114.903,-41.246,43.436)
N9: (-114.573,-42.680,45.121)
O5': (-118.187,-43.027,47.661)
O3': (-114.417,-44.390,49.173)
OP2: (-119.720,-41.114,47.946)
C3': (-115.468,-43.656,48.553)
C1': (-114.797,-43.441,46.345)
C5': (-117.805,-44.385,47.850)
O6: (-112.706,-41.026,41.290)
O4': (-116.010,-44.154,46.282)
C8: (-115.393,-41.747,44.535)
C2: (-111.472,-43.452,43.564)
C6: (-112.689,-41.761,42.285)
C5: (-113.680,-41.888,43.291)
C4: (-113.460,-42.774,44.318)
P: (-119.702,-42.585,47.919)
C4': (-116.315,-44.542,47.642)
C2': (-114.927,-42.600,47.599)
O2': (-113.659,-42.118,47.988)
N1: (-111.592,-42.598,42.502)
N2: (-110.342,-44.163,43.588)
N3: (-112.386,-43.587,44.519)
N7: (-114.903,-41.246,43.436)
N9: (-114.573,-42.680,45.121)
O5': (-118.187,-43.027,47.661)
O3': (-114.417,-44.390,49.173)
Image (generated by PyMOL):