ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A641:A720

Extra

PDB:
ATOM 1 O3' G A 640 49.133 50.763 -13.334 1.00 96.72 O
ATOM 2 P A A 641 49.654 49.557 -14.258 1.00120.24 P
ATOM 3 OP1 A A 641 49.913 50.108 -15.613 1.00116.95 O
ATOM 4 OP2 A A 641 48.682 48.446 -14.109 1.00117.13 O
ATOM 5 O5' A A 641 51.029 49.169 -13.576 1.00107.73 O
ATOM 6 C5' A A 641 51.984 50.166 -13.242 1.00103.70 C
ATOM 7 C4' A A 641 53.005 49.635 -12.269 1.00 99.75 C
ATOM 8 O4' A A 641 52.431 49.573 -10.936 1.00 97.71 O
ATOM 9 C3' A A 641 53.479 48.216 -12.526 1.00 95.35 C
ATOM 10 O3' A A 641 54.474 48.139 -13.520 1.00 96.14 O
ATOM 11 C2' A A 641 53.952 47.773 -11.159 1.00 96.72 C
ATOM 12 O2' A A 641 55.214 48.346 -10.863 1.00102.12 O
ATOM 13 C1' A A 641 52.904 48.427 -10.265 1.00 97.25 C
ATOM 14 N9 A A 641 51.766 47.530 -10.022 1.00 97.32 N
ATOM 15 C8 A A 641 50.524 47.559 -10.597 1.00 98.77 C
ATOM 16 N7 A A 641 49.729 46.606 -10.173 1.00101.25 N
ATOM 17 C5 A A 641 50.504 45.899 -9.264 1.00 99.51 C
ATOM 18 C6 A A 641 50.239 44.773 -8.464 1.00 96.33 C
ATOM 19 N6 A A 641 49.072 44.126 -8.441 1.00 94.88 N
ATOM 20 N1 A A 641 51.234 44.329 -7.673 1.00 97.12 N
ATOM 21 C2 A A 641 52.405 44.981 -7.695 1.00100.20 C
ATOM 22 N3 A A 641 52.779 46.047 -8.399 1.00 99.38 N
ATOM 23 C4 A A 641 51.763 46.461 -9.169 1.00 98.94 C
ATOM 24 P G A 642 54.562 46.845 -14.451 1.00104.89 P
ATOM 25 OP1 G A 642 55.483 47.165 -15.569 1.00 98.71 O
ATOM 26 OP2 G A 642 53.175 46.436 -14.761 1.00102.88 O
ATOM 27 O5' G A 642 55.224 45.780 -13.490 1.00113.34 O
TER

ATOM 1 O3' G B 719 45.590 35.600 -1.941 1.00 78.80 O
ATOM 2 P G B 720 44.659 36.857 -1.543 1.00 90.93 P
ATOM 3 OP1 G B 720 43.754 36.423 -0.441 1.00 88.56 O
ATOM 4 OP2 G B 720 44.058 37.361 -2.800 1.00101.52 O
ATOM 5 O5' G B 720 45.716 37.908 -0.991 1.00 91.18 O
ATOM 6 C5' G B 720 46.535 37.594 0.126 1.00 89.12 C
ATOM 7 C4' G B 720 47.992 37.859 -0.158 1.00 83.86 C
ATOM 8 O4' G B 720 48.314 37.433 -1.505 1.00 87.67 O
ATOM 9 C3' G B 720 48.415 39.313 -0.133 1.00 90.48 C
ATOM 10 O3' G B 720 48.628 39.797 1.170 1.00 91.04 O
ATOM 11 C2' G B 720 49.663 39.314 -0.998 1.00 90.25 C
ATOM 12 O2' G B 720 50.768 38.794 -0.278 1.00 88.11 O
ATOM 13 C1' G B 720 49.270 38.306 -2.073 1.00 88.16 C
ATOM 14 N9 G B 720 48.662 38.957 -3.247 1.00 81.45 N
ATOM 15 C8 G B 720 47.471 38.592 -3.810 1.00 79.60 C
ATOM 16 N7 G B 720 47.165 39.328 -4.834 1.00 87.88 N
ATOM 17 C5 G B 720 48.206 40.234 -4.959 1.00 82.64 C
ATOM 18 C6 G B 720 48.403 41.276 -5.901 1.00 86.44 C
ATOM 19 O6 G B 720 47.675 41.614 -6.845 1.00 89.08 O
ATOM 20 N1 G B 720 49.591 41.956 -5.669 1.00 88.33 N
ATOM 21 C2 G B 720 50.469 41.677 -4.655 1.00 89.15 C
ATOM 22 N2 G B 720 51.561 42.460 -4.591 1.00 85.96 N
ATOM 23 N3 G B 720 50.286 40.702 -3.772 1.00 91.09 N
ATOM 24 C4 G B 720 49.143 40.019 -3.984 1.00 82.30 C
ATOM 25 P U B 721 47.790 41.053 1.689 1.00 99.35 P
ATOM 26 OP1 U B 721 47.917 41.074 3.161 1.00 94.48 O
ATOM 27 OP2 U B 721 46.436 40.955 1.094 1.00 91.02 O
ATOM 28 O5' U B 721 48.573 42.284 1.048 1.00113.48 O
TER

Atoms:
OP1: (49.913,50.108,-15.613)
OP2: (48.682,48.446,-14.109)
C3': (53.479,48.216,-12.526)
C1': (52.904,48.427,-10.265)
C5': (51.984,50.166,-13.242)
O4': (52.431,49.573,-10.936)
C8: (50.524,47.559,-10.597)
O2': (55.214,48.346,-10.863)
C6: (50.239,44.773,-8.464)
C5: (50.504,45.899,-9.264)
C4: (51.763,46.461,-9.169)
P: (49.654,49.557,-14.258)
C4': (53.005,49.635,-12.269)
C2': (53.952,47.773,-11.159)
C2: (52.405,44.981,-7.695)
N1: (51.234,44.329,-7.673)
N3: (52.779,46.047,-8.399)
N6: (49.072,44.126,-8.441)
N7: (49.729,46.606,-10.173)
N9: (51.766,47.530,-10.022)
O5': (51.029,49.169,-13.576)
O3': (54.474,48.139,-13.520)
OP1: (43.754,36.423,-0.441)
OP2: (44.058,37.361,-2.800)
C3': (48.415,39.313,-0.133)
C1': (49.270,38.306,-2.073)
C5': (46.535,37.594,0.126)
O6: (47.675,41.614,-6.845)
O4': (48.314,37.433,-1.505)
C8: (47.471,38.592,-3.810)
C2: (50.469,41.677,-4.655)
C6: (48.403,41.276,-5.901)
C5: (48.206,40.234,-4.959)
C4: (49.143,40.019,-3.984)
P: (44.659,36.857,-1.543)
C4': (47.992,37.859,-0.158)
C2': (49.663,39.314,-0.998)
O2': (50.768,38.794,-0.278)
N1: (49.591,41.956,-5.669)
N2: (51.561,42.460,-4.591)
N3: (50.286,40.702,-3.772)
N7: (47.165,39.328,-4.834)
N9: (48.662,38.957,-3.247)
O5': (45.716,37.908,-0.991)
O3': (48.628,39.797,1.170)
Image (generated by PyMOL):
PyMOL image
show in jmol