Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02494:02037
Extra
PDB:
ATOM 1 O3' U A2493 41.390 134.367 108.536 1.00 29.29 O
ATOM 2 P A A2494 41.357 135.192 109.912 1.00 29.11 P
ATOM 3 OP1 A A2494 40.569 134.378 110.877 1.00 27.43 O
ATOM 4 OP2 A A2494 40.960 136.597 109.643 1.00 27.50 O
ATOM 5 O5' A A2494 42.876 135.184 110.375 1.00 28.80 O
ATOM 6 C5' A A2494 43.439 134.024 111.000 1.00 29.52 C
ATOM 7 C4' A A2494 44.751 134.374 111.633 1.00 29.80 C
ATOM 8 O4' A A2494 45.716 134.679 110.595 1.00 31.75 O
ATOM 9 C3' A A2494 44.734 135.625 112.491 1.00 30.43 C
ATOM 10 O3' A A2494 44.212 135.352 113.785 1.00 31.10 O
ATOM 11 C2' A A2494 46.208 136.010 112.505 1.00 32.13 C
ATOM 12 O2' A A2494 46.969 135.233 113.407 1.00 34.27 O
ATOM 13 C1' A A2494 46.624 135.658 111.071 1.00 31.90 C
ATOM 14 N9 A A2494 46.604 136.806 110.165 1.00 30.96 N
ATOM 15 C8 A A2494 45.606 137.241 109.329 1.00 30.57 C
ATOM 16 N7 A A2494 45.905 138.338 108.678 1.00 30.48 N
ATOM 17 C5 A A2494 47.192 138.638 109.103 1.00 31.95 C
ATOM 18 C6 A A2494 48.085 139.685 108.787 1.00 31.58 C
ATOM 19 N6 A A2494 47.821 140.658 107.915 1.00 31.25 N
ATOM 20 N1 A A2494 49.282 139.692 109.405 1.00 31.57 N
ATOM 21 C2 A A2494 49.567 138.710 110.266 1.00 31.58 C
ATOM 22 N3 A A2494 48.824 137.674 110.637 1.00 32.30 N
ATOM 23 C4 A A2494 47.634 137.698 110.014 1.00 31.93 C
ATOM 24 P C A2495 43.248 136.422 114.508 1.00 30.84 P
ATOM 25 OP1 C A2495 42.503 135.669 115.542 1.00 31.93 O
ATOM 26 OP2 C A2495 42.501 137.210 113.508 1.00 32.08 O
ATOM 27 O5' C A2495 44.259 137.408 115.241 1.00 29.58 O
TER
ATOM 1 O3' G B2036 54.777 148.647 108.840 1.00 31.62 O
ATOM 2 P G B2037 55.751 148.243 107.630 1.00 33.07 P
ATOM 3 OP1 G B2037 56.730 149.346 107.537 1.00 35.33 O
ATOM 4 OP2 G B2037 54.988 147.836 106.431 1.00 33.75 O
ATOM 5 O5' G B2037 56.519 146.965 108.165 1.00 33.45 O
ATOM 6 C5' G B2037 57.261 147.016 109.391 1.00 32.25 C
ATOM 7 C4' G B2037 57.067 145.734 110.154 1.00 32.25 C
ATOM 8 O4' G B2037 55.664 145.588 110.516 1.00 34.16 O
ATOM 9 C3' G B2037 57.328 144.475 109.355 1.00 31.97 C
ATOM 10 O3' G B2037 58.698 144.171 109.194 1.00 29.81 O
ATOM 11 C2' G B2037 56.574 143.425 110.153 1.00 32.73 C
ATOM 12 O2' G B2037 57.265 143.010 111.315 1.00 33.45 O
ATOM 13 C1' G B2037 55.320 144.208 110.540 1.00 32.89 C
ATOM 14 N9 G B2037 54.227 143.975 109.602 1.00 32.06 N
ATOM 15 C8 G B2037 54.074 144.502 108.343 1.00 33.10 C
ATOM 16 N7 G B2037 53.000 144.074 107.736 1.00 33.70 N
ATOM 17 C5 G B2037 52.406 143.218 108.654 1.00 33.52 C
ATOM 18 C6 G B2037 51.215 142.450 108.564 1.00 32.77 C
ATOM 19 O6 G B2037 50.421 142.366 107.623 1.00 34.56 O
ATOM 20 N1 G B2037 50.988 141.728 109.726 1.00 29.66 N
ATOM 21 C2 G B2037 51.798 141.734 110.828 1.00 30.16 C
ATOM 22 N2 G B2037 51.412 140.971 111.849 1.00 31.77 N
ATOM 23 N3 G B2037 52.906 142.436 110.925 1.00 31.38 N
ATOM 24 C4 G B2037 53.149 143.152 109.811 1.00 32.68 C
ATOM 25 P G B2038 59.114 143.080 108.107 1.00 27.97 P
ATOM 26 OP1 G B2038 60.587 143.002 108.052 1.00 28.61 O
ATOM 27 OP2 G B2038 58.364 143.418 106.885 1.00 27.90 O
ATOM 28 O5' G B2038 58.508 141.748 108.733 1.00 24.83 O
TER
ATOM 2 P A A2494 41.357 135.192 109.912 1.00 29.11 P
ATOM 3 OP1 A A2494 40.569 134.378 110.877 1.00 27.43 O
ATOM 4 OP2 A A2494 40.960 136.597 109.643 1.00 27.50 O
ATOM 5 O5' A A2494 42.876 135.184 110.375 1.00 28.80 O
ATOM 6 C5' A A2494 43.439 134.024 111.000 1.00 29.52 C
ATOM 7 C4' A A2494 44.751 134.374 111.633 1.00 29.80 C
ATOM 8 O4' A A2494 45.716 134.679 110.595 1.00 31.75 O
ATOM 9 C3' A A2494 44.734 135.625 112.491 1.00 30.43 C
ATOM 10 O3' A A2494 44.212 135.352 113.785 1.00 31.10 O
ATOM 11 C2' A A2494 46.208 136.010 112.505 1.00 32.13 C
ATOM 12 O2' A A2494 46.969 135.233 113.407 1.00 34.27 O
ATOM 13 C1' A A2494 46.624 135.658 111.071 1.00 31.90 C
ATOM 14 N9 A A2494 46.604 136.806 110.165 1.00 30.96 N
ATOM 15 C8 A A2494 45.606 137.241 109.329 1.00 30.57 C
ATOM 16 N7 A A2494 45.905 138.338 108.678 1.00 30.48 N
ATOM 17 C5 A A2494 47.192 138.638 109.103 1.00 31.95 C
ATOM 18 C6 A A2494 48.085 139.685 108.787 1.00 31.58 C
ATOM 19 N6 A A2494 47.821 140.658 107.915 1.00 31.25 N
ATOM 20 N1 A A2494 49.282 139.692 109.405 1.00 31.57 N
ATOM 21 C2 A A2494 49.567 138.710 110.266 1.00 31.58 C
ATOM 22 N3 A A2494 48.824 137.674 110.637 1.00 32.30 N
ATOM 23 C4 A A2494 47.634 137.698 110.014 1.00 31.93 C
ATOM 24 P C A2495 43.248 136.422 114.508 1.00 30.84 P
ATOM 25 OP1 C A2495 42.503 135.669 115.542 1.00 31.93 O
ATOM 26 OP2 C A2495 42.501 137.210 113.508 1.00 32.08 O
ATOM 27 O5' C A2495 44.259 137.408 115.241 1.00 29.58 O
TER
ATOM 1 O3' G B2036 54.777 148.647 108.840 1.00 31.62 O
ATOM 2 P G B2037 55.751 148.243 107.630 1.00 33.07 P
ATOM 3 OP1 G B2037 56.730 149.346 107.537 1.00 35.33 O
ATOM 4 OP2 G B2037 54.988 147.836 106.431 1.00 33.75 O
ATOM 5 O5' G B2037 56.519 146.965 108.165 1.00 33.45 O
ATOM 6 C5' G B2037 57.261 147.016 109.391 1.00 32.25 C
ATOM 7 C4' G B2037 57.067 145.734 110.154 1.00 32.25 C
ATOM 8 O4' G B2037 55.664 145.588 110.516 1.00 34.16 O
ATOM 9 C3' G B2037 57.328 144.475 109.355 1.00 31.97 C
ATOM 10 O3' G B2037 58.698 144.171 109.194 1.00 29.81 O
ATOM 11 C2' G B2037 56.574 143.425 110.153 1.00 32.73 C
ATOM 12 O2' G B2037 57.265 143.010 111.315 1.00 33.45 O
ATOM 13 C1' G B2037 55.320 144.208 110.540 1.00 32.89 C
ATOM 14 N9 G B2037 54.227 143.975 109.602 1.00 32.06 N
ATOM 15 C8 G B2037 54.074 144.502 108.343 1.00 33.10 C
ATOM 16 N7 G B2037 53.000 144.074 107.736 1.00 33.70 N
ATOM 17 C5 G B2037 52.406 143.218 108.654 1.00 33.52 C
ATOM 18 C6 G B2037 51.215 142.450 108.564 1.00 32.77 C
ATOM 19 O6 G B2037 50.421 142.366 107.623 1.00 34.56 O
ATOM 20 N1 G B2037 50.988 141.728 109.726 1.00 29.66 N
ATOM 21 C2 G B2037 51.798 141.734 110.828 1.00 30.16 C
ATOM 22 N2 G B2037 51.412 140.971 111.849 1.00 31.77 N
ATOM 23 N3 G B2037 52.906 142.436 110.925 1.00 31.38 N
ATOM 24 C4 G B2037 53.149 143.152 109.811 1.00 32.68 C
ATOM 25 P G B2038 59.114 143.080 108.107 1.00 27.97 P
ATOM 26 OP1 G B2038 60.587 143.002 108.052 1.00 28.61 O
ATOM 27 OP2 G B2038 58.364 143.418 106.885 1.00 27.90 O
ATOM 28 O5' G B2038 58.508 141.748 108.733 1.00 24.83 O
TER
Atoms:
OP1: (40.569,134.378,110.877)
OP2: (40.960,136.597,109.643)
C3': (44.734,135.625,112.491)
C1': (46.624,135.658,111.071)
C5': (43.439,134.024,111.000)
O4': (45.716,134.679,110.595)
C8: (45.606,137.241,109.329)
O2': (46.969,135.233,113.407)
C6: (48.085,139.685,108.787)
C5: (47.192,138.638,109.103)
C4: (47.634,137.698,110.014)
P: (41.357,135.192,109.912)
C4': (44.751,134.374,111.633)
C2': (46.208,136.010,112.505)
C2: (49.567,138.710,110.266)
N1: (49.282,139.692,109.405)
N3: (48.824,137.674,110.637)
N6: (47.821,140.658,107.915)
N7: (45.905,138.338,108.678)
N9: (46.604,136.806,110.165)
O5': (42.876,135.184,110.375)
O3': (44.212,135.352,113.785)
OP2: (40.960,136.597,109.643)
C3': (44.734,135.625,112.491)
C1': (46.624,135.658,111.071)
C5': (43.439,134.024,111.000)
O4': (45.716,134.679,110.595)
C8: (45.606,137.241,109.329)
O2': (46.969,135.233,113.407)
C6: (48.085,139.685,108.787)
C5: (47.192,138.638,109.103)
C4: (47.634,137.698,110.014)
P: (41.357,135.192,109.912)
C4': (44.751,134.374,111.633)
C2': (46.208,136.010,112.505)
C2: (49.567,138.710,110.266)
N1: (49.282,139.692,109.405)
N3: (48.824,137.674,110.637)
N6: (47.821,140.658,107.915)
N7: (45.905,138.338,108.678)
N9: (46.604,136.806,110.165)
O5': (42.876,135.184,110.375)
O3': (44.212,135.352,113.785)
OP1: (56.730,149.346,107.537)
OP2: (54.988,147.836,106.431)
C3': (57.328,144.475,109.355)
C1': (55.320,144.208,110.540)
C5': (57.261,147.016,109.391)
O6: (50.421,142.366,107.623)
O4': (55.664,145.588,110.516)
C8: (54.074,144.502,108.343)
C2: (51.798,141.734,110.828)
C6: (51.215,142.450,108.564)
C5: (52.406,143.218,108.654)
C4: (53.149,143.152,109.811)
P: (55.751,148.243,107.630)
C4': (57.067,145.734,110.154)
C2': (56.574,143.425,110.153)
O2': (57.265,143.010,111.315)
N1: (50.988,141.728,109.726)
N2: (51.412,140.971,111.849)
N3: (52.906,142.436,110.925)
N7: (53.000,144.074,107.736)
N9: (54.227,143.975,109.602)
O5': (56.519,146.965,108.165)
O3': (58.698,144.171,109.194)
OP2: (54.988,147.836,106.431)
C3': (57.328,144.475,109.355)
C1': (55.320,144.208,110.540)
C5': (57.261,147.016,109.391)
O6: (50.421,142.366,107.623)
O4': (55.664,145.588,110.516)
C8: (54.074,144.502,108.343)
C2: (51.798,141.734,110.828)
C6: (51.215,142.450,108.564)
C5: (52.406,143.218,108.654)
C4: (53.149,143.152,109.811)
P: (55.751,148.243,107.630)
C4': (57.067,145.734,110.154)
C2': (56.574,143.425,110.153)
O2': (57.265,143.010,111.315)
N1: (50.988,141.728,109.726)
N2: (51.412,140.971,111.849)
N3: (52.906,142.436,110.925)
N7: (53.000,144.074,107.736)
N9: (54.227,143.975,109.602)
O5': (56.519,146.965,108.165)
O3': (58.698,144.171,109.194)
Image (generated by PyMOL):