Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2563:A2560
Extra
PDB:
ATOM 1 O3' G A2562 -72.317 -62.015 -7.503 1.00 45.32 O
ATOM 2 P C A2563 -72.459 -60.646 -6.697 1.00 41.83 P
ATOM 3 OP1 C A2563 -71.433 -60.579 -5.627 1.00 41.93 O
ATOM 4 OP2 C A2563 -73.894 -60.504 -6.338 1.00 50.28 O
ATOM 5 O5' C A2563 -72.142 -59.549 -7.825 1.00 35.56 O
ATOM 6 C5' C A2563 -70.883 -59.458 -8.462 1.00 33.61 C
ATOM 7 C4' C A2563 -71.024 -58.352 -9.472 1.00 35.54 C
ATOM 8 O4' C A2563 -72.160 -58.678 -10.305 1.00 41.06 O
ATOM 9 C3' C A2563 -71.451 -57.026 -8.871 1.00 36.34 C
ATOM 10 O3' C A2563 -70.339 -56.352 -8.284 1.00 26.87 O
ATOM 11 C2' C A2563 -72.005 -56.327 -10.114 1.00 44.79 C
ATOM 12 O2' C A2563 -71.048 -55.804 -11.024 1.00 30.82 O
ATOM 13 C1' C A2563 -72.750 -57.482 -10.775 1.00 41.86 C
ATOM 14 N1 C A2563 -74.164 -57.473 -10.411 1.00 38.10 N
ATOM 15 C2 C A2563 -75.007 -56.511 -10.974 1.00 41.67 C
ATOM 16 O2 C A2563 -74.551 -55.688 -11.776 1.00 42.08 O
ATOM 17 N3 C A2563 -76.310 -56.507 -10.625 1.00 43.83 N
ATOM 18 C4 C A2563 -76.758 -57.410 -9.761 1.00 48.57 C
ATOM 19 N4 C A2563 -78.050 -57.371 -9.441 1.00 65.89 N
ATOM 20 C5 C A2563 -75.913 -58.395 -9.179 1.00 50.85 C
ATOM 21 C6 C A2563 -74.625 -58.392 -9.526 1.00 45.77 C
ATOM 22 P U A2564 -70.511 -55.437 -6.971 1.00 37.46 P
ATOM 23 OP1 U A2564 -69.149 -55.063 -6.531 1.00 43.81 O
ATOM 24 OP2 U A2564 -71.461 -56.065 -6.009 1.00 42.46 O
ATOM 25 O5' U A2564 -71.153 -54.108 -7.581 1.00 52.01 O
TER
ATOM 1 O3' C B2559 -81.048 -62.366 -8.149 1.00 54.21 O
ATOM 2 P G B2560 -80.909 -61.886 -6.622 1.00 60.12 P
ATOM 3 OP1 G B2560 -80.408 -63.049 -5.801 1.00 47.91 O
ATOM 4 OP2 G B2560 -82.152 -61.184 -6.246 1.00 70.57 O
ATOM 5 O5' G B2560 -79.811 -60.726 -6.779 1.00 53.13 O
ATOM 6 C5' G B2560 -78.571 -60.978 -7.437 1.00 61.02 C
ATOM 7 C4' G B2560 -77.440 -60.371 -6.627 1.00 55.90 C
ATOM 8 O4' G B2560 -77.795 -58.994 -6.385 1.00 52.00 O
ATOM 9 C3' G B2560 -77.243 -60.972 -5.238 1.00 52.39 C
ATOM 10 O3' G B2560 -76.454 -62.190 -5.282 1.00 48.65 O
ATOM 11 C2' G B2560 -76.598 -59.807 -4.477 1.00 55.43 C
ATOM 12 O2' G B2560 -75.188 -59.750 -4.555 1.00 60.23 O
ATOM 13 C1' G B2560 -77.185 -58.579 -5.183 1.00 59.36 C
ATOM 14 N9 G B2560 -78.159 -57.846 -4.377 1.00 56.47 N
ATOM 15 C8 G B2560 -78.087 -56.522 -4.015 1.00 56.20 C
ATOM 16 N7 G B2560 -79.081 -56.128 -3.282 1.00 52.80 N
ATOM 17 C5 G B2560 -79.858 -57.266 -3.146 1.00 49.53 C
ATOM 18 C6 G B2560 -81.071 -57.444 -2.453 1.00 58.44 C
ATOM 19 O6 G B2560 -81.710 -56.603 -1.808 1.00 76.01 O
ATOM 20 N1 G B2560 -81.539 -58.749 -2.559 1.00 55.84 N
ATOM 21 C2 G B2560 -80.907 -59.748 -3.260 1.00 59.52 C
ATOM 22 N2 G B2560 -81.512 -60.946 -3.259 1.00 63.83 N
ATOM 23 N3 G B2560 -79.767 -59.591 -3.916 1.00 63.95 N
ATOM 24 C4 G B2560 -79.308 -58.328 -3.813 1.00 53.86 C
ATOM 25 P A B2561 -76.863 -63.455 -4.375 1.00 60.99 P
ATOM 26 OP1 A B2561 -78.140 -64.120 -4.823 1.00 49.49 O
ATOM 27 OP2 A B2561 -76.770 -62.953 -2.986 1.00 72.31 O
ATOM 28 O5' A B2561 -75.594 -64.409 -4.616 1.00 49.46 O
TER
ATOM 2 P C A2563 -72.459 -60.646 -6.697 1.00 41.83 P
ATOM 3 OP1 C A2563 -71.433 -60.579 -5.627 1.00 41.93 O
ATOM 4 OP2 C A2563 -73.894 -60.504 -6.338 1.00 50.28 O
ATOM 5 O5' C A2563 -72.142 -59.549 -7.825 1.00 35.56 O
ATOM 6 C5' C A2563 -70.883 -59.458 -8.462 1.00 33.61 C
ATOM 7 C4' C A2563 -71.024 -58.352 -9.472 1.00 35.54 C
ATOM 8 O4' C A2563 -72.160 -58.678 -10.305 1.00 41.06 O
ATOM 9 C3' C A2563 -71.451 -57.026 -8.871 1.00 36.34 C
ATOM 10 O3' C A2563 -70.339 -56.352 -8.284 1.00 26.87 O
ATOM 11 C2' C A2563 -72.005 -56.327 -10.114 1.00 44.79 C
ATOM 12 O2' C A2563 -71.048 -55.804 -11.024 1.00 30.82 O
ATOM 13 C1' C A2563 -72.750 -57.482 -10.775 1.00 41.86 C
ATOM 14 N1 C A2563 -74.164 -57.473 -10.411 1.00 38.10 N
ATOM 15 C2 C A2563 -75.007 -56.511 -10.974 1.00 41.67 C
ATOM 16 O2 C A2563 -74.551 -55.688 -11.776 1.00 42.08 O
ATOM 17 N3 C A2563 -76.310 -56.507 -10.625 1.00 43.83 N
ATOM 18 C4 C A2563 -76.758 -57.410 -9.761 1.00 48.57 C
ATOM 19 N4 C A2563 -78.050 -57.371 -9.441 1.00 65.89 N
ATOM 20 C5 C A2563 -75.913 -58.395 -9.179 1.00 50.85 C
ATOM 21 C6 C A2563 -74.625 -58.392 -9.526 1.00 45.77 C
ATOM 22 P U A2564 -70.511 -55.437 -6.971 1.00 37.46 P
ATOM 23 OP1 U A2564 -69.149 -55.063 -6.531 1.00 43.81 O
ATOM 24 OP2 U A2564 -71.461 -56.065 -6.009 1.00 42.46 O
ATOM 25 O5' U A2564 -71.153 -54.108 -7.581 1.00 52.01 O
TER
ATOM 1 O3' C B2559 -81.048 -62.366 -8.149 1.00 54.21 O
ATOM 2 P G B2560 -80.909 -61.886 -6.622 1.00 60.12 P
ATOM 3 OP1 G B2560 -80.408 -63.049 -5.801 1.00 47.91 O
ATOM 4 OP2 G B2560 -82.152 -61.184 -6.246 1.00 70.57 O
ATOM 5 O5' G B2560 -79.811 -60.726 -6.779 1.00 53.13 O
ATOM 6 C5' G B2560 -78.571 -60.978 -7.437 1.00 61.02 C
ATOM 7 C4' G B2560 -77.440 -60.371 -6.627 1.00 55.90 C
ATOM 8 O4' G B2560 -77.795 -58.994 -6.385 1.00 52.00 O
ATOM 9 C3' G B2560 -77.243 -60.972 -5.238 1.00 52.39 C
ATOM 10 O3' G B2560 -76.454 -62.190 -5.282 1.00 48.65 O
ATOM 11 C2' G B2560 -76.598 -59.807 -4.477 1.00 55.43 C
ATOM 12 O2' G B2560 -75.188 -59.750 -4.555 1.00 60.23 O
ATOM 13 C1' G B2560 -77.185 -58.579 -5.183 1.00 59.36 C
ATOM 14 N9 G B2560 -78.159 -57.846 -4.377 1.00 56.47 N
ATOM 15 C8 G B2560 -78.087 -56.522 -4.015 1.00 56.20 C
ATOM 16 N7 G B2560 -79.081 -56.128 -3.282 1.00 52.80 N
ATOM 17 C5 G B2560 -79.858 -57.266 -3.146 1.00 49.53 C
ATOM 18 C6 G B2560 -81.071 -57.444 -2.453 1.00 58.44 C
ATOM 19 O6 G B2560 -81.710 -56.603 -1.808 1.00 76.01 O
ATOM 20 N1 G B2560 -81.539 -58.749 -2.559 1.00 55.84 N
ATOM 21 C2 G B2560 -80.907 -59.748 -3.260 1.00 59.52 C
ATOM 22 N2 G B2560 -81.512 -60.946 -3.259 1.00 63.83 N
ATOM 23 N3 G B2560 -79.767 -59.591 -3.916 1.00 63.95 N
ATOM 24 C4 G B2560 -79.308 -58.328 -3.813 1.00 53.86 C
ATOM 25 P A B2561 -76.863 -63.455 -4.375 1.00 60.99 P
ATOM 26 OP1 A B2561 -78.140 -64.120 -4.823 1.00 49.49 O
ATOM 27 OP2 A B2561 -76.770 -62.953 -2.986 1.00 72.31 O
ATOM 28 O5' A B2561 -75.594 -64.409 -4.616 1.00 49.46 O
TER
Atoms:
C2: (-75.007,-56.511,-10.974)
OP1: (-71.433,-60.579,-5.627)
OP2: (-73.894,-60.504,-6.338)
C4: (-76.758,-57.410,-9.761)
O5': (-72.142,-59.549,-7.825)
C3': (-71.451,-57.026,-8.871)
C1': (-72.750,-57.482,-10.775)
O4': (-72.160,-58.678,-10.305)
C5': (-70.883,-59.458,-8.462)
P: (-72.459,-60.646,-6.697)
O2: (-74.551,-55.688,-11.776)
C4': (-71.024,-58.352,-9.472)
C2': (-72.005,-56.327,-10.114)
O2': (-71.048,-55.804,-11.024)
N1: (-74.164,-57.473,-10.411)
N3: (-76.310,-56.507,-10.625)
N4: (-78.050,-57.371,-9.441)
C6: (-74.625,-58.392,-9.526)
C5: (-75.913,-58.395,-9.179)
O3': (-70.339,-56.352,-8.284)
OP1: (-71.433,-60.579,-5.627)
OP2: (-73.894,-60.504,-6.338)
C4: (-76.758,-57.410,-9.761)
O5': (-72.142,-59.549,-7.825)
C3': (-71.451,-57.026,-8.871)
C1': (-72.750,-57.482,-10.775)
O4': (-72.160,-58.678,-10.305)
C5': (-70.883,-59.458,-8.462)
P: (-72.459,-60.646,-6.697)
O2: (-74.551,-55.688,-11.776)
C4': (-71.024,-58.352,-9.472)
C2': (-72.005,-56.327,-10.114)
O2': (-71.048,-55.804,-11.024)
N1: (-74.164,-57.473,-10.411)
N3: (-76.310,-56.507,-10.625)
N4: (-78.050,-57.371,-9.441)
C6: (-74.625,-58.392,-9.526)
C5: (-75.913,-58.395,-9.179)
O3': (-70.339,-56.352,-8.284)
OP1: (-80.408,-63.049,-5.801)
OP2: (-82.152,-61.184,-6.246)
C3': (-77.243,-60.972,-5.238)
C1': (-77.185,-58.579,-5.183)
C5': (-78.571,-60.978,-7.437)
O6: (-81.710,-56.603,-1.808)
O4': (-77.795,-58.994,-6.385)
C8: (-78.087,-56.522,-4.015)
C2: (-80.907,-59.748,-3.260)
C6: (-81.071,-57.444,-2.453)
C5: (-79.858,-57.266,-3.146)
C4: (-79.308,-58.328,-3.813)
P: (-80.909,-61.886,-6.622)
C4': (-77.440,-60.371,-6.627)
C2': (-76.598,-59.807,-4.477)
O2': (-75.188,-59.750,-4.555)
N1: (-81.539,-58.749,-2.559)
N2: (-81.512,-60.946,-3.259)
N3: (-79.767,-59.591,-3.916)
N7: (-79.081,-56.128,-3.282)
N9: (-78.159,-57.846,-4.377)
O5': (-79.811,-60.726,-6.779)
O3': (-76.454,-62.190,-5.282)
OP2: (-82.152,-61.184,-6.246)
C3': (-77.243,-60.972,-5.238)
C1': (-77.185,-58.579,-5.183)
C5': (-78.571,-60.978,-7.437)
O6: (-81.710,-56.603,-1.808)
O4': (-77.795,-58.994,-6.385)
C8: (-78.087,-56.522,-4.015)
C2: (-80.907,-59.748,-3.260)
C6: (-81.071,-57.444,-2.453)
C5: (-79.858,-57.266,-3.146)
C4: (-79.308,-58.328,-3.813)
P: (-80.909,-61.886,-6.622)
C4': (-77.440,-60.371,-6.627)
C2': (-76.598,-59.807,-4.477)
O2': (-75.188,-59.750,-4.555)
N1: (-81.539,-58.749,-2.559)
N2: (-81.512,-60.946,-3.259)
N3: (-79.767,-59.591,-3.916)
N7: (-79.081,-56.128,-3.282)
N9: (-78.159,-57.846,-4.377)
O5': (-79.811,-60.726,-6.779)
O3': (-76.454,-62.190,-5.282)
Image (generated by PyMOL):