Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A562:A577
Extra
PDB:
ATOM 1 O3' U A 561 -79.611 -89.847 3.651 1.00 0.01 O
ATOM 2 P A A 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 3 OP1 A A 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 4 OP2 A A 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 5 O5' A A 562 -79.042 -89.974 6.034 1.00 0.01 O
ATOM 6 C5' A A 562 -77.953 -89.096 5.900 1.00 0.01 C
ATOM 7 C4' A A 562 -76.898 -89.403 6.910 1.00 0.01 C
ATOM 8 O4' A A 562 -75.660 -88.777 6.528 1.00 0.01 O
ATOM 9 C3' A A 562 -77.143 -88.877 8.291 1.00 0.01 C
ATOM 10 O3' A A 562 -78.047 -89.659 9.024 1.00 0.01 O
ATOM 11 C2' A A 562 -75.761 -88.895 8.859 1.00 0.01 C
ATOM 12 O2' A A 562 -75.380 -90.231 9.135 1.00 0.01 O
ATOM 13 C1' A A 562 -74.955 -88.407 7.668 1.00 0.01 C
ATOM 14 N9 A A 562 -74.775 -86.944 7.651 1.00 0.01 N
ATOM 15 C8 A A 562 -75.296 -86.053 6.762 1.00 0.01 C
ATOM 16 N7 A A 562 -74.952 -84.806 6.931 1.00 0.01 N
ATOM 17 C5 A A 562 -74.124 -84.904 8.029 1.00 0.01 C
ATOM 18 C6 A A 562 -73.412 -83.926 8.729 1.00 0.01 C
ATOM 19 N6 A A 562 -73.461 -82.653 8.411 1.00 0.01 N
ATOM 20 N1 A A 562 -72.666 -84.291 9.766 1.00 0.01 N
ATOM 21 C2 A A 562 -72.664 -85.593 10.069 1.00 0.01 C
ATOM 22 N3 A A 562 -73.283 -86.609 9.492 1.00 0.01 N
ATOM 23 C4 A A 562 -74.002 -86.197 8.465 1.00 0.01 C
ATOM 24 P C A 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 25 OP1 C A 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 26 OP2 C A 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 27 O5' C A 563 -78.187 -88.383 11.112 1.00 0.01 O
TER
ATOM 1 O3' G B 576 -68.406 -75.367 15.095 1.00 0.01 O
ATOM 2 P G B 577 -67.205 -75.608 14.085 1.00 0.01 P
ATOM 3 OP1 G B 577 -66.083 -74.794 14.538 1.00 0.01 O
ATOM 4 OP2 G B 577 -67.710 -75.415 12.698 1.00 0.01 O
ATOM 5 O5' G B 577 -66.893 -77.125 14.317 1.00 0.01 O
ATOM 6 C5' G B 577 -66.502 -77.595 15.578 1.00 0.01 C
ATOM 7 C4' G B 577 -66.402 -79.070 15.564 1.00 0.01 C
ATOM 8 O4' G B 577 -67.717 -79.629 15.451 1.00 0.01 O
ATOM 9 C3' G B 577 -65.658 -79.648 14.396 1.00 0.01 C
ATOM 10 O3' G B 577 -64.282 -79.655 14.613 1.00 0.01 O
ATOM 11 C2' G B 577 -66.240 -81.032 14.306 1.00 0.01 C
ATOM 12 O2' G B 577 -65.684 -81.862 15.299 1.00 0.01 O
ATOM 13 C1' G B 577 -67.684 -80.773 14.661 1.00 0.01 C
ATOM 14 N9 G B 577 -68.495 -80.512 13.492 1.00 0.01 N
ATOM 15 C8 G B 577 -68.452 -79.376 12.756 1.00 0.01 C
ATOM 16 N7 G B 577 -69.322 -79.412 11.803 1.00 0.01 N
ATOM 17 C5 G B 577 -69.963 -80.653 11.931 1.00 0.01 C
ATOM 18 C6 G B 577 -71.004 -81.291 11.192 1.00 0.01 C
ATOM 19 O6 G B 577 -71.595 -80.875 10.221 1.00 0.01 O
ATOM 20 N1 G B 577 -71.371 -82.529 11.660 1.00 0.01 N
ATOM 21 C2 G B 577 -70.785 -83.096 12.734 1.00 0.01 C
ATOM 22 N2 G B 577 -71.248 -84.281 13.066 1.00 0.01 N
ATOM 23 N3 G B 577 -69.815 -82.547 13.447 1.00 0.01 N
ATOM 24 C4 G B 577 -69.455 -81.328 12.994 1.00 0.01 C
ATOM 25 P G B 578 -63.302 -78.858 13.667 1.00 0.01 P
ATOM 26 OP1 G B 578 -62.194 -78.374 14.514 1.00 0.01 O
ATOM 27 OP2 G B 578 -64.086 -77.908 12.911 1.00 0.01 O
ATOM 28 O5' G B 578 -62.777 -79.968 12.720 1.00 0.01 O
TER
ATOM 2 P A A 562 -80.281 -89.863 5.085 1.00 0.01 P
ATOM 3 OP1 A A 562 -81.074 -91.082 5.195 1.00 0.01 O
ATOM 4 OP2 A A 562 -80.949 -88.558 5.247 1.00 0.01 O
ATOM 5 O5' A A 562 -79.042 -89.974 6.034 1.00 0.01 O
ATOM 6 C5' A A 562 -77.953 -89.096 5.900 1.00 0.01 C
ATOM 7 C4' A A 562 -76.898 -89.403 6.910 1.00 0.01 C
ATOM 8 O4' A A 562 -75.660 -88.777 6.528 1.00 0.01 O
ATOM 9 C3' A A 562 -77.143 -88.877 8.291 1.00 0.01 C
ATOM 10 O3' A A 562 -78.047 -89.659 9.024 1.00 0.01 O
ATOM 11 C2' A A 562 -75.761 -88.895 8.859 1.00 0.01 C
ATOM 12 O2' A A 562 -75.380 -90.231 9.135 1.00 0.01 O
ATOM 13 C1' A A 562 -74.955 -88.407 7.668 1.00 0.01 C
ATOM 14 N9 A A 562 -74.775 -86.944 7.651 1.00 0.01 N
ATOM 15 C8 A A 562 -75.296 -86.053 6.762 1.00 0.01 C
ATOM 16 N7 A A 562 -74.952 -84.806 6.931 1.00 0.01 N
ATOM 17 C5 A A 562 -74.124 -84.904 8.029 1.00 0.01 C
ATOM 18 C6 A A 562 -73.412 -83.926 8.729 1.00 0.01 C
ATOM 19 N6 A A 562 -73.461 -82.653 8.411 1.00 0.01 N
ATOM 20 N1 A A 562 -72.666 -84.291 9.766 1.00 0.01 N
ATOM 21 C2 A A 562 -72.664 -85.593 10.069 1.00 0.01 C
ATOM 22 N3 A A 562 -73.283 -86.609 9.492 1.00 0.01 N
ATOM 23 C4 A A 562 -74.002 -86.197 8.465 1.00 0.01 C
ATOM 24 P C A 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 25 OP1 C A 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 26 OP2 C A 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 27 O5' C A 563 -78.187 -88.383 11.112 1.00 0.01 O
TER
ATOM 1 O3' G B 576 -68.406 -75.367 15.095 1.00 0.01 O
ATOM 2 P G B 577 -67.205 -75.608 14.085 1.00 0.01 P
ATOM 3 OP1 G B 577 -66.083 -74.794 14.538 1.00 0.01 O
ATOM 4 OP2 G B 577 -67.710 -75.415 12.698 1.00 0.01 O
ATOM 5 O5' G B 577 -66.893 -77.125 14.317 1.00 0.01 O
ATOM 6 C5' G B 577 -66.502 -77.595 15.578 1.00 0.01 C
ATOM 7 C4' G B 577 -66.402 -79.070 15.564 1.00 0.01 C
ATOM 8 O4' G B 577 -67.717 -79.629 15.451 1.00 0.01 O
ATOM 9 C3' G B 577 -65.658 -79.648 14.396 1.00 0.01 C
ATOM 10 O3' G B 577 -64.282 -79.655 14.613 1.00 0.01 O
ATOM 11 C2' G B 577 -66.240 -81.032 14.306 1.00 0.01 C
ATOM 12 O2' G B 577 -65.684 -81.862 15.299 1.00 0.01 O
ATOM 13 C1' G B 577 -67.684 -80.773 14.661 1.00 0.01 C
ATOM 14 N9 G B 577 -68.495 -80.512 13.492 1.00 0.01 N
ATOM 15 C8 G B 577 -68.452 -79.376 12.756 1.00 0.01 C
ATOM 16 N7 G B 577 -69.322 -79.412 11.803 1.00 0.01 N
ATOM 17 C5 G B 577 -69.963 -80.653 11.931 1.00 0.01 C
ATOM 18 C6 G B 577 -71.004 -81.291 11.192 1.00 0.01 C
ATOM 19 O6 G B 577 -71.595 -80.875 10.221 1.00 0.01 O
ATOM 20 N1 G B 577 -71.371 -82.529 11.660 1.00 0.01 N
ATOM 21 C2 G B 577 -70.785 -83.096 12.734 1.00 0.01 C
ATOM 22 N2 G B 577 -71.248 -84.281 13.066 1.00 0.01 N
ATOM 23 N3 G B 577 -69.815 -82.547 13.447 1.00 0.01 N
ATOM 24 C4 G B 577 -69.455 -81.328 12.994 1.00 0.01 C
ATOM 25 P G B 578 -63.302 -78.858 13.667 1.00 0.01 P
ATOM 26 OP1 G B 578 -62.194 -78.374 14.514 1.00 0.01 O
ATOM 27 OP2 G B 578 -64.086 -77.908 12.911 1.00 0.01 O
ATOM 28 O5' G B 578 -62.777 -79.968 12.720 1.00 0.01 O
TER
Atoms:
OP1: (-81.074,-91.082,5.195)
OP2: (-80.949,-88.558,5.247)
C3': (-77.143,-88.877,8.291)
C1': (-74.955,-88.407,7.668)
C5': (-77.953,-89.096,5.900)
O4': (-75.660,-88.777,6.528)
C8: (-75.296,-86.053,6.762)
O2': (-75.380,-90.231,9.135)
C6: (-73.412,-83.926,8.729)
C5: (-74.124,-84.904,8.029)
C4: (-74.002,-86.197,8.465)
P: (-80.281,-89.863,5.085)
C4': (-76.898,-89.403,6.910)
C2': (-75.761,-88.895,8.859)
C2: (-72.664,-85.593,10.069)
N1: (-72.666,-84.291,9.766)
N3: (-73.283,-86.609,9.492)
N6: (-73.461,-82.653,8.411)
N7: (-74.952,-84.806,6.931)
N9: (-74.775,-86.944,7.651)
O5': (-79.042,-89.974,6.034)
O3': (-78.047,-89.659,9.024)
OP2: (-80.949,-88.558,5.247)
C3': (-77.143,-88.877,8.291)
C1': (-74.955,-88.407,7.668)
C5': (-77.953,-89.096,5.900)
O4': (-75.660,-88.777,6.528)
C8: (-75.296,-86.053,6.762)
O2': (-75.380,-90.231,9.135)
C6: (-73.412,-83.926,8.729)
C5: (-74.124,-84.904,8.029)
C4: (-74.002,-86.197,8.465)
P: (-80.281,-89.863,5.085)
C4': (-76.898,-89.403,6.910)
C2': (-75.761,-88.895,8.859)
C2: (-72.664,-85.593,10.069)
N1: (-72.666,-84.291,9.766)
N3: (-73.283,-86.609,9.492)
N6: (-73.461,-82.653,8.411)
N7: (-74.952,-84.806,6.931)
N9: (-74.775,-86.944,7.651)
O5': (-79.042,-89.974,6.034)
O3': (-78.047,-89.659,9.024)
OP1: (-66.083,-74.794,14.538)
OP2: (-67.710,-75.415,12.698)
C3': (-65.658,-79.648,14.396)
C1': (-67.684,-80.773,14.661)
C5': (-66.502,-77.595,15.578)
O6: (-71.595,-80.875,10.221)
O4': (-67.717,-79.629,15.451)
C8: (-68.452,-79.376,12.756)
C2: (-70.785,-83.096,12.734)
C6: (-71.004,-81.291,11.192)
C5: (-69.963,-80.653,11.931)
C4: (-69.455,-81.328,12.994)
P: (-67.205,-75.608,14.085)
C4': (-66.402,-79.070,15.564)
C2': (-66.240,-81.032,14.306)
O2': (-65.684,-81.862,15.299)
N1: (-71.371,-82.529,11.660)
N2: (-71.248,-84.281,13.066)
N3: (-69.815,-82.547,13.447)
N7: (-69.322,-79.412,11.803)
N9: (-68.495,-80.512,13.492)
O5': (-66.893,-77.125,14.317)
O3': (-64.282,-79.655,14.613)
OP2: (-67.710,-75.415,12.698)
C3': (-65.658,-79.648,14.396)
C1': (-67.684,-80.773,14.661)
C5': (-66.502,-77.595,15.578)
O6: (-71.595,-80.875,10.221)
O4': (-67.717,-79.629,15.451)
C8: (-68.452,-79.376,12.756)
C2: (-70.785,-83.096,12.734)
C6: (-71.004,-81.291,11.192)
C5: (-69.963,-80.653,11.931)
C4: (-69.455,-81.328,12.994)
P: (-67.205,-75.608,14.085)
C4': (-66.402,-79.070,15.564)
C2': (-66.240,-81.032,14.306)
O2': (-65.684,-81.862,15.299)
N1: (-71.371,-82.529,11.660)
N2: (-71.248,-84.281,13.066)
N3: (-69.815,-82.547,13.447)
N7: (-69.322,-79.412,11.803)
N9: (-68.495,-80.512,13.492)
O5': (-66.893,-77.125,14.317)
O3': (-64.282,-79.655,14.613)
Image (generated by PyMOL):