Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:096:061
Extra
PDB:
ATOM 1 O3' G A 95 59.286 151.867 15.773 1.00 54.52 O
ATOM 2 P A A 96 60.322 152.388 16.886 1.00 54.71 P
ATOM 3 OP1 A A 96 61.605 152.638 16.181 1.00 55.53 O
ATOM 4 OP2 A A 96 60.291 151.461 18.049 1.00 55.05 O
ATOM 5 O5' A A 96 59.730 153.792 17.350 1.00 50.75 O
ATOM 6 C5' A A 96 59.760 154.919 16.469 1.00 48.78 C
ATOM 7 C4' A A 96 59.464 156.187 17.226 1.00 48.84 C
ATOM 8 O4' A A 96 58.086 156.195 17.679 1.00 49.32 O
ATOM 9 C3' A A 96 60.267 156.403 18.495 1.00 47.65 C
ATOM 10 O3' A A 96 61.566 156.900 18.215 1.00 48.76 O
ATOM 11 C2' A A 96 59.402 157.405 19.243 1.00 46.04 C
ATOM 12 O2' A A 96 59.530 158.709 18.733 1.00 42.92 O
ATOM 13 C1' A A 96 58.001 156.886 18.918 1.00 47.92 C
ATOM 14 N9 A A 96 57.518 155.952 19.934 1.00 48.82 N
ATOM 15 C8 A A 96 57.477 154.581 19.875 1.00 49.06 C
ATOM 16 N7 A A 96 56.996 154.021 20.956 1.00 50.40 N
ATOM 17 C5 A A 96 56.701 155.096 21.784 1.00 50.08 C
ATOM 18 C6 A A 96 56.164 155.173 23.083 1.00 49.96 C
ATOM 19 N6 A A 96 55.810 154.111 23.806 1.00 48.68 N
ATOM 20 N1 A A 96 56.000 156.399 23.621 1.00 51.17 N
ATOM 21 C2 A A 96 56.353 157.467 22.898 1.00 50.76 C
ATOM 22 N3 A A 96 56.864 157.523 21.671 1.00 50.63 N
ATOM 23 C4 A A 96 57.015 156.290 21.165 1.00 49.09 C
ATOM 24 P U A 97 62.800 156.451 19.135 1.00 49.64 P
ATOM 25 OP1 U A 97 64.039 157.001 18.533 1.00 50.88 O
ATOM 26 OP2 U A 97 62.690 154.990 19.361 1.00 50.25 O
ATOM 27 O5' U A 97 62.519 157.199 20.515 1.00 48.89 O
TER
ATOM 1 O3' A B 60 47.053 158.440 32.089 1.00 52.96 O
ATOM 2 P G B 61 46.507 158.655 30.596 1.00 56.50 P
ATOM 3 OP1 G B 61 45.924 160.023 30.487 1.00 55.68 O
ATOM 4 OP2 G B 61 45.673 157.466 30.249 1.00 56.01 O
ATOM 5 O5' G B 61 47.842 158.606 29.737 1.00 54.96 O
ATOM 6 C5' G B 61 47.920 159.212 28.449 1.00 53.12 C
ATOM 7 C4' G B 61 49.129 160.105 28.386 1.00 53.00 C
ATOM 8 O4' G B 61 50.212 159.514 29.153 1.00 50.98 O
ATOM 9 C3' G B 61 49.693 160.322 26.994 1.00 52.61 C
ATOM 10 O3' G B 61 48.989 161.365 26.315 1.00 52.40 O
ATOM 11 C2' G B 61 51.151 160.645 27.301 1.00 51.33 C
ATOM 12 O2' G B 61 51.298 161.960 27.798 1.00 53.17 O
ATOM 13 C1' G B 61 51.432 159.680 28.458 1.00 48.58 C
ATOM 14 N9 G B 61 51.892 158.352 28.063 1.00 45.70 N
ATOM 15 C8 G B 61 51.225 157.163 28.256 1.00 44.93 C
ATOM 16 N7 G B 61 51.882 156.127 27.810 1.00 43.33 N
ATOM 17 C5 G B 61 53.051 156.661 27.284 1.00 43.80 C
ATOM 18 C6 G B 61 54.149 156.022 26.655 1.00 43.89 C
ATOM 19 O6 G B 61 54.311 154.820 26.418 1.00 46.24 O
ATOM 20 N1 G B 61 55.125 156.934 26.286 1.00 43.95 N
ATOM 21 C2 G B 61 55.056 158.287 26.488 1.00 44.15 C
ATOM 22 N2 G B 61 56.107 159.001 26.059 1.00 42.50 N
ATOM 23 N3 G B 61 54.035 158.899 27.065 1.00 44.23 N
ATOM 24 C4 G B 61 53.075 158.032 27.436 1.00 44.01 C
ATOM 25 P C B 62 48.491 161.148 24.795 1.00 53.06 P
ATOM 26 OP1 C B 62 47.628 162.313 24.474 1.00 52.29 O
ATOM 27 OP2 C B 62 47.960 159.773 24.603 1.00 51.85 O
ATOM 28 O5' C B 62 49.827 161.260 23.939 1.00 52.75 O
TER
ATOM 2 P A A 96 60.322 152.388 16.886 1.00 54.71 P
ATOM 3 OP1 A A 96 61.605 152.638 16.181 1.00 55.53 O
ATOM 4 OP2 A A 96 60.291 151.461 18.049 1.00 55.05 O
ATOM 5 O5' A A 96 59.730 153.792 17.350 1.00 50.75 O
ATOM 6 C5' A A 96 59.760 154.919 16.469 1.00 48.78 C
ATOM 7 C4' A A 96 59.464 156.187 17.226 1.00 48.84 C
ATOM 8 O4' A A 96 58.086 156.195 17.679 1.00 49.32 O
ATOM 9 C3' A A 96 60.267 156.403 18.495 1.00 47.65 C
ATOM 10 O3' A A 96 61.566 156.900 18.215 1.00 48.76 O
ATOM 11 C2' A A 96 59.402 157.405 19.243 1.00 46.04 C
ATOM 12 O2' A A 96 59.530 158.709 18.733 1.00 42.92 O
ATOM 13 C1' A A 96 58.001 156.886 18.918 1.00 47.92 C
ATOM 14 N9 A A 96 57.518 155.952 19.934 1.00 48.82 N
ATOM 15 C8 A A 96 57.477 154.581 19.875 1.00 49.06 C
ATOM 16 N7 A A 96 56.996 154.021 20.956 1.00 50.40 N
ATOM 17 C5 A A 96 56.701 155.096 21.784 1.00 50.08 C
ATOM 18 C6 A A 96 56.164 155.173 23.083 1.00 49.96 C
ATOM 19 N6 A A 96 55.810 154.111 23.806 1.00 48.68 N
ATOM 20 N1 A A 96 56.000 156.399 23.621 1.00 51.17 N
ATOM 21 C2 A A 96 56.353 157.467 22.898 1.00 50.76 C
ATOM 22 N3 A A 96 56.864 157.523 21.671 1.00 50.63 N
ATOM 23 C4 A A 96 57.015 156.290 21.165 1.00 49.09 C
ATOM 24 P U A 97 62.800 156.451 19.135 1.00 49.64 P
ATOM 25 OP1 U A 97 64.039 157.001 18.533 1.00 50.88 O
ATOM 26 OP2 U A 97 62.690 154.990 19.361 1.00 50.25 O
ATOM 27 O5' U A 97 62.519 157.199 20.515 1.00 48.89 O
TER
ATOM 1 O3' A B 60 47.053 158.440 32.089 1.00 52.96 O
ATOM 2 P G B 61 46.507 158.655 30.596 1.00 56.50 P
ATOM 3 OP1 G B 61 45.924 160.023 30.487 1.00 55.68 O
ATOM 4 OP2 G B 61 45.673 157.466 30.249 1.00 56.01 O
ATOM 5 O5' G B 61 47.842 158.606 29.737 1.00 54.96 O
ATOM 6 C5' G B 61 47.920 159.212 28.449 1.00 53.12 C
ATOM 7 C4' G B 61 49.129 160.105 28.386 1.00 53.00 C
ATOM 8 O4' G B 61 50.212 159.514 29.153 1.00 50.98 O
ATOM 9 C3' G B 61 49.693 160.322 26.994 1.00 52.61 C
ATOM 10 O3' G B 61 48.989 161.365 26.315 1.00 52.40 O
ATOM 11 C2' G B 61 51.151 160.645 27.301 1.00 51.33 C
ATOM 12 O2' G B 61 51.298 161.960 27.798 1.00 53.17 O
ATOM 13 C1' G B 61 51.432 159.680 28.458 1.00 48.58 C
ATOM 14 N9 G B 61 51.892 158.352 28.063 1.00 45.70 N
ATOM 15 C8 G B 61 51.225 157.163 28.256 1.00 44.93 C
ATOM 16 N7 G B 61 51.882 156.127 27.810 1.00 43.33 N
ATOM 17 C5 G B 61 53.051 156.661 27.284 1.00 43.80 C
ATOM 18 C6 G B 61 54.149 156.022 26.655 1.00 43.89 C
ATOM 19 O6 G B 61 54.311 154.820 26.418 1.00 46.24 O
ATOM 20 N1 G B 61 55.125 156.934 26.286 1.00 43.95 N
ATOM 21 C2 G B 61 55.056 158.287 26.488 1.00 44.15 C
ATOM 22 N2 G B 61 56.107 159.001 26.059 1.00 42.50 N
ATOM 23 N3 G B 61 54.035 158.899 27.065 1.00 44.23 N
ATOM 24 C4 G B 61 53.075 158.032 27.436 1.00 44.01 C
ATOM 25 P C B 62 48.491 161.148 24.795 1.00 53.06 P
ATOM 26 OP1 C B 62 47.628 162.313 24.474 1.00 52.29 O
ATOM 27 OP2 C B 62 47.960 159.773 24.603 1.00 51.85 O
ATOM 28 O5' C B 62 49.827 161.260 23.939 1.00 52.75 O
TER
Atoms:
OP1: (61.605,152.638,16.181)
OP2: (60.291,151.461,18.049)
C3': (60.267,156.403,18.495)
C1': (58.001,156.886,18.918)
C5': (59.760,154.919,16.469)
O4': (58.086,156.195,17.679)
C8: (57.477,154.581,19.875)
O2': (59.530,158.709,18.733)
C6: (56.164,155.173,23.083)
C5: (56.701,155.096,21.784)
C4: (57.015,156.290,21.165)
P: (60.322,152.388,16.886)
C4': (59.464,156.187,17.226)
C2': (59.402,157.405,19.243)
C2: (56.353,157.467,22.898)
N1: (56.000,156.399,23.621)
N3: (56.864,157.523,21.671)
N6: (55.810,154.111,23.806)
N7: (56.996,154.021,20.956)
N9: (57.518,155.952,19.934)
O5': (59.730,153.792,17.350)
O3': (61.566,156.900,18.215)
OP2: (60.291,151.461,18.049)
C3': (60.267,156.403,18.495)
C1': (58.001,156.886,18.918)
C5': (59.760,154.919,16.469)
O4': (58.086,156.195,17.679)
C8: (57.477,154.581,19.875)
O2': (59.530,158.709,18.733)
C6: (56.164,155.173,23.083)
C5: (56.701,155.096,21.784)
C4: (57.015,156.290,21.165)
P: (60.322,152.388,16.886)
C4': (59.464,156.187,17.226)
C2': (59.402,157.405,19.243)
C2: (56.353,157.467,22.898)
N1: (56.000,156.399,23.621)
N3: (56.864,157.523,21.671)
N6: (55.810,154.111,23.806)
N7: (56.996,154.021,20.956)
N9: (57.518,155.952,19.934)
O5': (59.730,153.792,17.350)
O3': (61.566,156.900,18.215)
OP1: (45.924,160.023,30.487)
OP2: (45.673,157.466,30.249)
C3': (49.693,160.322,26.994)
C1': (51.432,159.680,28.458)
C5': (47.920,159.212,28.449)
O6: (54.311,154.820,26.418)
O4': (50.212,159.514,29.153)
C8: (51.225,157.163,28.256)
C2: (55.056,158.287,26.488)
C6: (54.149,156.022,26.655)
C5: (53.051,156.661,27.284)
C4: (53.075,158.032,27.436)
P: (46.507,158.655,30.596)
C4': (49.129,160.105,28.386)
C2': (51.151,160.645,27.301)
O2': (51.298,161.960,27.798)
N1: (55.125,156.934,26.286)
N2: (56.107,159.001,26.059)
N3: (54.035,158.899,27.065)
N7: (51.882,156.127,27.810)
N9: (51.892,158.352,28.063)
O5': (47.842,158.606,29.737)
O3': (48.989,161.365,26.315)
OP2: (45.673,157.466,30.249)
C3': (49.693,160.322,26.994)
C1': (51.432,159.680,28.458)
C5': (47.920,159.212,28.449)
O6: (54.311,154.820,26.418)
O4': (50.212,159.514,29.153)
C8: (51.225,157.163,28.256)
C2: (55.056,158.287,26.488)
C6: (54.149,156.022,26.655)
C5: (53.051,156.661,27.284)
C4: (53.075,158.032,27.436)
P: (46.507,158.655,30.596)
C4': (49.129,160.105,28.386)
C2': (51.151,160.645,27.301)
O2': (51.298,161.960,27.798)
N1: (55.125,156.934,26.286)
N2: (56.107,159.001,26.059)
N3: (54.035,158.899,27.065)
N7: (51.882,156.127,27.810)
N9: (51.892,158.352,28.063)
O5': (47.842,158.606,29.737)
O3': (48.989,161.365,26.315)
Image (generated by PyMOL):