Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:D28:D15
Extra
PDB:
ATOM 1 O3' C A 27 56.011 30.667 6.762 1.00 34.01 O
ATOM 2 P A A 28 56.205 29.681 8.024 1.00 34.63 P
ATOM 3 OP1 A A 28 56.505 28.350 7.464 1.00 35.24 O
ATOM 4 OP2 A A 28 55.077 29.844 8.988 1.00 35.02 O
ATOM 5 O5' A A 28 57.531 30.237 8.713 1.00 32.77 O
ATOM 6 C5' A A 28 58.736 30.206 7.992 1.00 31.45 C
ATOM 7 C4' A A 28 59.706 31.161 8.611 1.00 30.92 C
ATOM 8 O4' A A 28 59.174 32.503 8.617 1.00 30.43 O
ATOM 9 C3' A A 28 59.972 30.907 10.071 1.00 31.40 C
ATOM 10 O3' A A 28 60.775 29.754 10.243 1.00 31.05 O
ATOM 11 C2' A A 28 60.654 32.214 10.451 1.00 31.38 C
ATOM 12 O2' A A 28 62.021 32.290 10.032 1.00 31.79 O
ATOM 13 C1' A A 28 59.762 33.212 9.703 1.00 30.64 C
ATOM 14 N9 A A 28 58.699 33.798 10.514 1.00 29.73 N
ATOM 15 C8 A A 28 57.381 33.432 10.536 1.00 29.96 C
ATOM 16 N7 A A 28 56.647 34.169 11.330 1.00 29.86 N
ATOM 17 C5 A A 28 57.546 35.070 11.870 1.00 30.86 C
ATOM 18 C6 A A 28 57.395 36.123 12.808 1.00 32.53 C
ATOM 19 N6 A A 28 56.210 36.410 13.361 1.00 32.67 N
ATOM 20 N1 A A 28 58.506 36.858 13.148 1.00 30.98 N
ATOM 21 C2 A A 28 59.670 36.536 12.571 1.00 28.86 C
ATOM 22 N3 A A 28 59.923 35.565 11.688 1.00 28.84 N
ATOM 23 C4 A A 28 58.815 34.861 11.378 1.00 29.57 C
ATOM 24 P A A 29 60.571 28.791 11.500 1.00 30.22 P
ATOM 25 OP1 A A 29 61.611 27.743 11.365 1.00 30.42 O
ATOM 26 OP2 A A 29 59.133 28.418 11.579 1.00 29.61 O
ATOM 27 O5' A A 29 60.959 29.711 12.759 1.00 27.91 O
TER
ATOM 1 O3' C B 14 52.474 44.583 18.876 1.00 26.26 O
ATOM 2 P G B 15 52.686 44.923 17.328 1.00 29.77 P
ATOM 3 OP1 G B 15 52.205 46.310 17.092 1.00 28.32 O
ATOM 4 OP2 G B 15 52.134 43.802 16.525 1.00 30.17 O
ATOM 5 O5' G B 15 54.273 44.890 17.169 1.00 29.65 O
ATOM 6 C5' G B 15 55.069 45.833 17.819 1.00 29.67 C
ATOM 7 C4' G B 15 56.496 45.381 17.746 1.00 29.98 C
ATOM 8 O4' G B 15 56.671 44.180 18.543 1.00 29.94 O
ATOM 9 C3' G B 15 56.955 44.967 16.356 1.00 30.69 C
ATOM 10 O3' G B 15 57.200 46.115 15.513 1.00 30.22 O
ATOM 11 C2' G B 15 58.183 44.141 16.743 1.00 30.87 C
ATOM 12 O2' G B 15 59.308 44.894 17.151 1.00 31.53 O
ATOM 13 C1' G B 15 57.573 43.312 17.883 1.00 30.09 C
ATOM 14 N9 G B 15 56.896 42.154 17.306 1.00 29.55 N
ATOM 15 C8 G B 15 55.559 41.857 17.186 1.00 28.62 C
ATOM 16 N7 G B 15 55.347 40.745 16.536 1.00 28.42 N
ATOM 17 C5 G B 15 56.620 40.313 16.195 1.00 28.83 C
ATOM 18 C6 G B 15 57.057 39.185 15.481 1.00 29.79 C
ATOM 19 O6 G B 15 56.376 38.299 14.993 1.00 30.81 O
ATOM 20 N1 G B 15 58.438 39.125 15.354 1.00 29.75 N
ATOM 21 C2 G B 15 59.290 40.072 15.862 1.00 30.59 C
ATOM 22 N2 G B 15 60.613 39.892 15.673 1.00 31.56 N
ATOM 23 N3 G B 15 58.888 41.123 16.532 1.00 30.17 N
ATOM 24 C4 G B 15 57.556 41.174 16.652 1.00 29.08 C
ATOM 25 P G B 16 57.842 46.006 14.046 1.00 28.62 P
ATOM 26 OP1 G B 16 58.238 47.379 13.683 1.00 28.85 O
ATOM 27 OP2 G B 16 56.936 45.250 13.163 1.00 27.59 O
ATOM 28 O5' G B 16 59.161 45.134 14.271 1.00 27.41 O
TER
ATOM 2 P A A 28 56.205 29.681 8.024 1.00 34.63 P
ATOM 3 OP1 A A 28 56.505 28.350 7.464 1.00 35.24 O
ATOM 4 OP2 A A 28 55.077 29.844 8.988 1.00 35.02 O
ATOM 5 O5' A A 28 57.531 30.237 8.713 1.00 32.77 O
ATOM 6 C5' A A 28 58.736 30.206 7.992 1.00 31.45 C
ATOM 7 C4' A A 28 59.706 31.161 8.611 1.00 30.92 C
ATOM 8 O4' A A 28 59.174 32.503 8.617 1.00 30.43 O
ATOM 9 C3' A A 28 59.972 30.907 10.071 1.00 31.40 C
ATOM 10 O3' A A 28 60.775 29.754 10.243 1.00 31.05 O
ATOM 11 C2' A A 28 60.654 32.214 10.451 1.00 31.38 C
ATOM 12 O2' A A 28 62.021 32.290 10.032 1.00 31.79 O
ATOM 13 C1' A A 28 59.762 33.212 9.703 1.00 30.64 C
ATOM 14 N9 A A 28 58.699 33.798 10.514 1.00 29.73 N
ATOM 15 C8 A A 28 57.381 33.432 10.536 1.00 29.96 C
ATOM 16 N7 A A 28 56.647 34.169 11.330 1.00 29.86 N
ATOM 17 C5 A A 28 57.546 35.070 11.870 1.00 30.86 C
ATOM 18 C6 A A 28 57.395 36.123 12.808 1.00 32.53 C
ATOM 19 N6 A A 28 56.210 36.410 13.361 1.00 32.67 N
ATOM 20 N1 A A 28 58.506 36.858 13.148 1.00 30.98 N
ATOM 21 C2 A A 28 59.670 36.536 12.571 1.00 28.86 C
ATOM 22 N3 A A 28 59.923 35.565 11.688 1.00 28.84 N
ATOM 23 C4 A A 28 58.815 34.861 11.378 1.00 29.57 C
ATOM 24 P A A 29 60.571 28.791 11.500 1.00 30.22 P
ATOM 25 OP1 A A 29 61.611 27.743 11.365 1.00 30.42 O
ATOM 26 OP2 A A 29 59.133 28.418 11.579 1.00 29.61 O
ATOM 27 O5' A A 29 60.959 29.711 12.759 1.00 27.91 O
TER
ATOM 1 O3' C B 14 52.474 44.583 18.876 1.00 26.26 O
ATOM 2 P G B 15 52.686 44.923 17.328 1.00 29.77 P
ATOM 3 OP1 G B 15 52.205 46.310 17.092 1.00 28.32 O
ATOM 4 OP2 G B 15 52.134 43.802 16.525 1.00 30.17 O
ATOM 5 O5' G B 15 54.273 44.890 17.169 1.00 29.65 O
ATOM 6 C5' G B 15 55.069 45.833 17.819 1.00 29.67 C
ATOM 7 C4' G B 15 56.496 45.381 17.746 1.00 29.98 C
ATOM 8 O4' G B 15 56.671 44.180 18.543 1.00 29.94 O
ATOM 9 C3' G B 15 56.955 44.967 16.356 1.00 30.69 C
ATOM 10 O3' G B 15 57.200 46.115 15.513 1.00 30.22 O
ATOM 11 C2' G B 15 58.183 44.141 16.743 1.00 30.87 C
ATOM 12 O2' G B 15 59.308 44.894 17.151 1.00 31.53 O
ATOM 13 C1' G B 15 57.573 43.312 17.883 1.00 30.09 C
ATOM 14 N9 G B 15 56.896 42.154 17.306 1.00 29.55 N
ATOM 15 C8 G B 15 55.559 41.857 17.186 1.00 28.62 C
ATOM 16 N7 G B 15 55.347 40.745 16.536 1.00 28.42 N
ATOM 17 C5 G B 15 56.620 40.313 16.195 1.00 28.83 C
ATOM 18 C6 G B 15 57.057 39.185 15.481 1.00 29.79 C
ATOM 19 O6 G B 15 56.376 38.299 14.993 1.00 30.81 O
ATOM 20 N1 G B 15 58.438 39.125 15.354 1.00 29.75 N
ATOM 21 C2 G B 15 59.290 40.072 15.862 1.00 30.59 C
ATOM 22 N2 G B 15 60.613 39.892 15.673 1.00 31.56 N
ATOM 23 N3 G B 15 58.888 41.123 16.532 1.00 30.17 N
ATOM 24 C4 G B 15 57.556 41.174 16.652 1.00 29.08 C
ATOM 25 P G B 16 57.842 46.006 14.046 1.00 28.62 P
ATOM 26 OP1 G B 16 58.238 47.379 13.683 1.00 28.85 O
ATOM 27 OP2 G B 16 56.936 45.250 13.163 1.00 27.59 O
ATOM 28 O5' G B 16 59.161 45.134 14.271 1.00 27.41 O
TER
Atoms:
OP1: (56.505,28.350,7.464)
OP2: (55.077,29.844,8.988)
C3': (59.972,30.907,10.071)
C1': (59.762,33.212,9.703)
C5': (58.736,30.206,7.992)
O4': (59.174,32.503,8.617)
C8: (57.381,33.432,10.536)
O2': (62.021,32.290,10.032)
C6: (57.395,36.123,12.808)
C5: (57.546,35.070,11.870)
C4: (58.815,34.861,11.378)
P: (56.205,29.681,8.024)
C4': (59.706,31.161,8.611)
C2': (60.654,32.214,10.451)
C2: (59.670,36.536,12.571)
N1: (58.506,36.858,13.148)
N3: (59.923,35.565,11.688)
N6: (56.210,36.410,13.361)
N7: (56.647,34.169,11.330)
N9: (58.699,33.798,10.514)
O5': (57.531,30.237,8.713)
O3': (60.775,29.754,10.243)
OP2: (55.077,29.844,8.988)
C3': (59.972,30.907,10.071)
C1': (59.762,33.212,9.703)
C5': (58.736,30.206,7.992)
O4': (59.174,32.503,8.617)
C8: (57.381,33.432,10.536)
O2': (62.021,32.290,10.032)
C6: (57.395,36.123,12.808)
C5: (57.546,35.070,11.870)
C4: (58.815,34.861,11.378)
P: (56.205,29.681,8.024)
C4': (59.706,31.161,8.611)
C2': (60.654,32.214,10.451)
C2: (59.670,36.536,12.571)
N1: (58.506,36.858,13.148)
N3: (59.923,35.565,11.688)
N6: (56.210,36.410,13.361)
N7: (56.647,34.169,11.330)
N9: (58.699,33.798,10.514)
O5': (57.531,30.237,8.713)
O3': (60.775,29.754,10.243)
OP1: (52.205,46.310,17.092)
OP2: (52.134,43.802,16.525)
C3': (56.955,44.967,16.356)
C1': (57.573,43.312,17.883)
C5': (55.069,45.833,17.819)
O6: (56.376,38.299,14.993)
O4': (56.671,44.180,18.543)
C8: (55.559,41.857,17.186)
C2: (59.290,40.072,15.862)
C6: (57.057,39.185,15.481)
C5: (56.620,40.313,16.195)
C4: (57.556,41.174,16.652)
P: (52.686,44.923,17.328)
C4': (56.496,45.381,17.746)
C2': (58.183,44.141,16.743)
O2': (59.308,44.894,17.151)
N1: (58.438,39.125,15.354)
N2: (60.613,39.892,15.673)
N3: (58.888,41.123,16.532)
N7: (55.347,40.745,16.536)
N9: (56.896,42.154,17.306)
O5': (54.273,44.890,17.169)
O3': (57.200,46.115,15.513)
OP2: (52.134,43.802,16.525)
C3': (56.955,44.967,16.356)
C1': (57.573,43.312,17.883)
C5': (55.069,45.833,17.819)
O6: (56.376,38.299,14.993)
O4': (56.671,44.180,18.543)
C8: (55.559,41.857,17.186)
C2: (59.290,40.072,15.862)
C6: (57.057,39.185,15.481)
C5: (56.620,40.313,16.195)
C4: (57.556,41.174,16.652)
P: (52.686,44.923,17.328)
C4': (56.496,45.381,17.746)
C2': (58.183,44.141,16.743)
O2': (59.308,44.894,17.151)
N1: (58.438,39.125,15.354)
N2: (60.613,39.892,15.673)
N3: (58.888,41.123,16.532)
N7: (55.347,40.745,16.536)
N9: (56.896,42.154,17.306)
O5': (54.273,44.890,17.169)
O3': (57.200,46.115,15.513)
Image (generated by PyMOL):