Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1GID:B2:B112
Extra
PDB:
ATOM 1 O3' A A 1 55.158 45.277 57.226 1.00 59.16 O
ATOM 2 P A A 2 55.971 43.921 57.393 1.00 64.73 P
ATOM 3 OP1 A A 2 55.377 42.935 56.460 1.00 70.59 O
ATOM 4 OP2 A A 2 56.084 43.606 58.853 1.00 62.79 O
ATOM 5 O5' A A 2 57.378 44.240 56.750 1.00 63.30 O
ATOM 6 C5' A A 2 58.256 43.185 56.428 1.00 67.73 C
ATOM 7 C4' A A 2 59.226 43.631 55.376 1.00 71.74 C
ATOM 8 O4' A A 2 59.563 45.038 55.571 1.00 71.02 O
ATOM 9 C3' A A 2 60.546 42.889 55.452 1.00 75.25 C
ATOM 10 O3' A A 2 61.120 42.792 54.154 1.00 79.28 O
ATOM 11 C2' A A 2 61.322 43.746 56.456 1.00 72.99 C
ATOM 12 O2' A A 2 62.735 43.626 56.418 1.00 78.44 O
ATOM 13 C1' A A 2 60.896 45.148 56.038 1.00 66.87 C
ATOM 14 N9 A A 2 60.955 46.102 57.142 1.00 55.02 N
ATOM 15 C8 A A 2 60.087 46.339 58.174 1.00 52.82 C
ATOM 16 N7 A A 2 60.485 47.284 58.990 1.00 50.77 N
ATOM 17 C5 A A 2 61.692 47.693 58.454 1.00 49.01 C
ATOM 18 C6 A A 2 62.614 48.663 58.843 1.00 48.90 C
ATOM 19 N6 A A 2 62.478 49.442 59.918 1.00 47.88 N
ATOM 20 N1 A A 2 63.713 48.813 58.077 1.00 46.79 N
ATOM 21 C2 A A 2 63.862 48.032 57.001 1.00 41.78 C
ATOM 22 N3 A A 2 63.073 47.088 56.541 1.00 38.45 N
ATOM 23 C4 A A 2 61.990 46.971 57.320 1.00 47.66 C
ATOM 24 P U A 3 61.359 41.332 53.516 1.00 81.28 P
ATOM 25 OP1 U A 3 61.915 41.472 52.139 1.00 83.17 O
ATOM 26 OP2 U A 3 60.095 40.573 53.727 1.00 84.88 O
ATOM 27 O5' U A 3 62.467 40.688 54.460 0.00 77.00 O
TER
ATOM 1 O3' A B 111 69.719 58.254 62.435 1.00 31.34 O
ATOM 2 P G B 112 68.709 58.681 61.262 1.00 31.09 P
ATOM 3 OP1 G B 112 69.150 60.014 60.754 1.00 27.48 O
ATOM 4 OP2 G B 112 67.344 58.479 61.736 1.00 35.06 O
ATOM 5 O5' G B 112 68.899 57.591 60.128 1.00 30.68 O
ATOM 6 C5' G B 112 69.949 57.733 59.194 1.00 36.29 C
ATOM 7 C4' G B 112 69.960 56.573 58.251 1.00 36.53 C
ATOM 8 O4' G B 112 69.937 55.367 59.049 1.00 34.53 O
ATOM 9 C3' G B 112 68.751 56.395 57.356 1.00 37.19 C
ATOM 10 O3' G B 112 68.764 57.234 56.197 1.00 37.14 O
ATOM 11 C2' G B 112 68.911 54.936 56.980 1.00 35.40 C
ATOM 12 O2' G B 112 69.920 54.746 56.028 1.00 40.43 O
ATOM 13 C1' G B 112 69.358 54.330 58.304 1.00 30.55 C
ATOM 14 N9 G B 112 68.196 53.854 59.021 1.00 28.15 N
ATOM 15 C8 G B 112 67.550 54.453 60.060 1.00 27.75 C
ATOM 16 N7 G B 112 66.509 53.778 60.463 1.00 34.62 N
ATOM 17 C5 G B 112 66.482 52.663 59.635 1.00 34.49 C
ATOM 18 C6 G B 112 65.574 51.563 59.568 1.00 36.95 C
ATOM 19 O6 G B 112 64.565 51.335 60.243 1.00 36.72 O
ATOM 20 N1 G B 112 65.929 50.675 58.568 1.00 35.25 N
ATOM 21 C2 G B 112 66.998 50.811 57.740 1.00 32.38 C
ATOM 22 N2 G B 112 67.169 49.854 56.844 1.00 35.75 N
ATOM 23 N3 G B 112 67.836 51.811 57.784 1.00 32.60 N
ATOM 24 C4 G B 112 67.519 52.697 58.747 1.00 32.17 C
ATOM 25 P C B 113 67.386 57.496 55.394 1.00 38.85 P
ATOM 26 OP1 C B 113 67.668 58.334 54.213 1.00 38.17 O
ATOM 27 OP2 C B 113 66.375 57.954 56.377 1.00 37.90 O
ATOM 28 O5' C B 113 66.940 56.045 54.897 1.00 30.24 O
TER
ATOM 2 P A A 2 55.971 43.921 57.393 1.00 64.73 P
ATOM 3 OP1 A A 2 55.377 42.935 56.460 1.00 70.59 O
ATOM 4 OP2 A A 2 56.084 43.606 58.853 1.00 62.79 O
ATOM 5 O5' A A 2 57.378 44.240 56.750 1.00 63.30 O
ATOM 6 C5' A A 2 58.256 43.185 56.428 1.00 67.73 C
ATOM 7 C4' A A 2 59.226 43.631 55.376 1.00 71.74 C
ATOM 8 O4' A A 2 59.563 45.038 55.571 1.00 71.02 O
ATOM 9 C3' A A 2 60.546 42.889 55.452 1.00 75.25 C
ATOM 10 O3' A A 2 61.120 42.792 54.154 1.00 79.28 O
ATOM 11 C2' A A 2 61.322 43.746 56.456 1.00 72.99 C
ATOM 12 O2' A A 2 62.735 43.626 56.418 1.00 78.44 O
ATOM 13 C1' A A 2 60.896 45.148 56.038 1.00 66.87 C
ATOM 14 N9 A A 2 60.955 46.102 57.142 1.00 55.02 N
ATOM 15 C8 A A 2 60.087 46.339 58.174 1.00 52.82 C
ATOM 16 N7 A A 2 60.485 47.284 58.990 1.00 50.77 N
ATOM 17 C5 A A 2 61.692 47.693 58.454 1.00 49.01 C
ATOM 18 C6 A A 2 62.614 48.663 58.843 1.00 48.90 C
ATOM 19 N6 A A 2 62.478 49.442 59.918 1.00 47.88 N
ATOM 20 N1 A A 2 63.713 48.813 58.077 1.00 46.79 N
ATOM 21 C2 A A 2 63.862 48.032 57.001 1.00 41.78 C
ATOM 22 N3 A A 2 63.073 47.088 56.541 1.00 38.45 N
ATOM 23 C4 A A 2 61.990 46.971 57.320 1.00 47.66 C
ATOM 24 P U A 3 61.359 41.332 53.516 1.00 81.28 P
ATOM 25 OP1 U A 3 61.915 41.472 52.139 1.00 83.17 O
ATOM 26 OP2 U A 3 60.095 40.573 53.727 1.00 84.88 O
ATOM 27 O5' U A 3 62.467 40.688 54.460 0.00 77.00 O
TER
ATOM 1 O3' A B 111 69.719 58.254 62.435 1.00 31.34 O
ATOM 2 P G B 112 68.709 58.681 61.262 1.00 31.09 P
ATOM 3 OP1 G B 112 69.150 60.014 60.754 1.00 27.48 O
ATOM 4 OP2 G B 112 67.344 58.479 61.736 1.00 35.06 O
ATOM 5 O5' G B 112 68.899 57.591 60.128 1.00 30.68 O
ATOM 6 C5' G B 112 69.949 57.733 59.194 1.00 36.29 C
ATOM 7 C4' G B 112 69.960 56.573 58.251 1.00 36.53 C
ATOM 8 O4' G B 112 69.937 55.367 59.049 1.00 34.53 O
ATOM 9 C3' G B 112 68.751 56.395 57.356 1.00 37.19 C
ATOM 10 O3' G B 112 68.764 57.234 56.197 1.00 37.14 O
ATOM 11 C2' G B 112 68.911 54.936 56.980 1.00 35.40 C
ATOM 12 O2' G B 112 69.920 54.746 56.028 1.00 40.43 O
ATOM 13 C1' G B 112 69.358 54.330 58.304 1.00 30.55 C
ATOM 14 N9 G B 112 68.196 53.854 59.021 1.00 28.15 N
ATOM 15 C8 G B 112 67.550 54.453 60.060 1.00 27.75 C
ATOM 16 N7 G B 112 66.509 53.778 60.463 1.00 34.62 N
ATOM 17 C5 G B 112 66.482 52.663 59.635 1.00 34.49 C
ATOM 18 C6 G B 112 65.574 51.563 59.568 1.00 36.95 C
ATOM 19 O6 G B 112 64.565 51.335 60.243 1.00 36.72 O
ATOM 20 N1 G B 112 65.929 50.675 58.568 1.00 35.25 N
ATOM 21 C2 G B 112 66.998 50.811 57.740 1.00 32.38 C
ATOM 22 N2 G B 112 67.169 49.854 56.844 1.00 35.75 N
ATOM 23 N3 G B 112 67.836 51.811 57.784 1.00 32.60 N
ATOM 24 C4 G B 112 67.519 52.697 58.747 1.00 32.17 C
ATOM 25 P C B 113 67.386 57.496 55.394 1.00 38.85 P
ATOM 26 OP1 C B 113 67.668 58.334 54.213 1.00 38.17 O
ATOM 27 OP2 C B 113 66.375 57.954 56.377 1.00 37.90 O
ATOM 28 O5' C B 113 66.940 56.045 54.897 1.00 30.24 O
TER
Atoms:
OP1: (55.377,42.935,56.460)
OP2: (56.084,43.606,58.853)
C3': (60.546,42.889,55.452)
C1': (60.896,45.148,56.038)
C5': (58.256,43.185,56.428)
O4': (59.563,45.038,55.571)
C8: (60.087,46.339,58.174)
O2': (62.735,43.626,56.418)
C6: (62.614,48.663,58.843)
C5: (61.692,47.693,58.454)
C4: (61.990,46.971,57.320)
P: (55.971,43.921,57.393)
C4': (59.226,43.631,55.376)
C2': (61.322,43.746,56.456)
C2: (63.862,48.032,57.001)
N1: (63.713,48.813,58.077)
N3: (63.073,47.088,56.541)
N6: (62.478,49.442,59.918)
N7: (60.485,47.284,58.990)
N9: (60.955,46.102,57.142)
O5': (57.378,44.240,56.750)
O3': (61.120,42.792,54.154)
OP2: (56.084,43.606,58.853)
C3': (60.546,42.889,55.452)
C1': (60.896,45.148,56.038)
C5': (58.256,43.185,56.428)
O4': (59.563,45.038,55.571)
C8: (60.087,46.339,58.174)
O2': (62.735,43.626,56.418)
C6: (62.614,48.663,58.843)
C5: (61.692,47.693,58.454)
C4: (61.990,46.971,57.320)
P: (55.971,43.921,57.393)
C4': (59.226,43.631,55.376)
C2': (61.322,43.746,56.456)
C2: (63.862,48.032,57.001)
N1: (63.713,48.813,58.077)
N3: (63.073,47.088,56.541)
N6: (62.478,49.442,59.918)
N7: (60.485,47.284,58.990)
N9: (60.955,46.102,57.142)
O5': (57.378,44.240,56.750)
O3': (61.120,42.792,54.154)
OP1: (69.150,60.014,60.754)
OP2: (67.344,58.479,61.736)
C3': (68.751,56.395,57.356)
C1': (69.358,54.330,58.304)
C5': (69.949,57.733,59.194)
O6: (64.565,51.335,60.243)
O4': (69.937,55.367,59.049)
C8: (67.550,54.453,60.060)
C2: (66.998,50.811,57.740)
C6: (65.574,51.563,59.568)
C5: (66.482,52.663,59.635)
C4: (67.519,52.697,58.747)
P: (68.709,58.681,61.262)
C4': (69.960,56.573,58.251)
C2': (68.911,54.936,56.980)
O2': (69.920,54.746,56.028)
N1: (65.929,50.675,58.568)
N2: (67.169,49.854,56.844)
N3: (67.836,51.811,57.784)
N7: (66.509,53.778,60.463)
N9: (68.196,53.854,59.021)
O5': (68.899,57.591,60.128)
O3': (68.764,57.234,56.197)
OP2: (67.344,58.479,61.736)
C3': (68.751,56.395,57.356)
C1': (69.358,54.330,58.304)
C5': (69.949,57.733,59.194)
O6: (64.565,51.335,60.243)
O4': (69.937,55.367,59.049)
C8: (67.550,54.453,60.060)
C2: (66.998,50.811,57.740)
C6: (65.574,51.563,59.568)
C5: (66.482,52.663,59.635)
C4: (67.519,52.697,58.747)
P: (68.709,58.681,61.262)
C4': (69.960,56.573,58.251)
C2': (68.911,54.936,56.980)
O2': (69.920,54.746,56.028)
N1: (65.929,50.675,58.568)
N2: (67.169,49.854,56.844)
N3: (67.836,51.811,57.784)
N7: (66.509,53.778,60.463)
N9: (68.196,53.854,59.021)
O5': (68.899,57.591,60.128)
O3': (68.764,57.234,56.197)
Image (generated by PyMOL):