Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1033:A1108
Extra
PDB:
ATOM 1 O3' A A1032 -138.740 -88.745 -30.651 1.00 2.78 O
ATOM 2 P A A1033 -139.747 -88.427 -31.865 1.00 15.21 P
ATOM 3 OP1 A A1033 -141.134 -88.632 -31.340 1.00 15.21 O
ATOM 4 OP2 A A1033 -139.291 -89.234 -33.026 1.00 15.21 O
ATOM 5 O5' A A1033 -139.497 -86.875 -32.141 1.00 15.21 O
ATOM 6 C5' A A1033 -140.281 -86.177 -33.074 1.00 15.21 C
ATOM 7 C4' A A1033 -140.180 -84.714 -32.847 1.00 15.21 C
ATOM 8 O4' A A1033 -138.834 -84.400 -32.466 1.00 15.21 O
ATOM 9 C3' A A1033 -140.438 -83.843 -34.063 1.00 15.21 C
ATOM 10 O3' A A1033 -141.805 -83.623 -34.301 1.00 15.21 O
ATOM 11 C2' A A1033 -139.650 -82.582 -33.760 1.00 15.21 C
ATOM 12 O2' A A1033 -140.340 -81.733 -32.857 1.00 15.21 O
ATOM 13 C1' A A1033 -138.434 -83.187 -33.070 1.00 15.21 C
ATOM 14 N9 A A1033 -137.407 -83.500 -34.054 1.00 14.98 N
ATOM 15 C8 A A1033 -136.960 -84.717 -34.457 1.00 14.98 C
ATOM 16 N7 A A1033 -136.061 -84.626 -35.398 1.00 14.98 N
ATOM 17 C5 A A1033 -135.963 -83.266 -35.613 1.00 14.98 C
ATOM 18 C6 A A1033 -135.182 -82.528 -36.491 1.00 14.98 C
ATOM 19 N6 A A1033 -134.325 -83.132 -37.327 1.00 14.98 N
ATOM 20 N1 A A1033 -135.327 -81.168 -36.458 1.00 14.98 N
ATOM 21 C2 A A1033 -136.199 -80.608 -35.597 1.00 14.98 C
ATOM 22 N3 A A1033 -136.990 -81.216 -34.719 1.00 14.98 N
ATOM 23 C4 A A1033 -136.801 -82.550 -34.798 1.00 14.98 C
ATOM 24 P G A1034 -142.414 -84.001 -35.721 1.00 8.64 P
ATOM 25 OP1 G A1034 -143.876 -83.882 -35.590 1.00 8.64 O
ATOM 26 OP2 G A1034 -141.834 -85.297 -36.123 1.00 8.64 O
ATOM 27 O5' G A1034 -141.865 -82.838 -36.634 1.00 8.64 O
TER
ATOM 1 O3' C B1107 -129.106 -75.961 -45.046 1.00 0.18 O
ATOM 2 P G B1108 -127.821 -76.001 -44.107 1.00 16.70 P
ATOM 3 OP1 G B1108 -126.904 -74.928 -44.584 1.00 16.70 O
ATOM 4 OP2 G B1108 -127.352 -77.410 -44.082 1.00 16.70 O
ATOM 5 O5' G B1108 -128.402 -75.616 -42.694 1.00 16.70 O
ATOM 6 C5' G B1108 -129.290 -74.532 -42.554 1.00 16.70 C
ATOM 7 C4' G B1108 -129.906 -74.531 -41.194 1.00 16.70 C
ATOM 8 O4' G B1108 -130.836 -75.649 -41.097 1.00 16.70 O
ATOM 9 C3' G B1108 -128.912 -74.705 -40.039 1.00 16.70 C
ATOM 10 O3' G B1108 -129.339 -73.938 -38.919 1.00 16.70 O
ATOM 11 C2' G B1108 -129.054 -76.175 -39.706 1.00 16.70 C
ATOM 12 O2' G B1108 -128.665 -76.524 -38.395 1.00 16.70 O
ATOM 13 C1' G B1108 -130.547 -76.363 -39.922 1.00 16.70 C
ATOM 14 N9 G B1108 -130.962 -77.761 -40.062 1.00 17.06 N
ATOM 15 C8 G B1108 -130.270 -78.783 -40.666 1.00 17.06 C
ATOM 16 N7 G B1108 -130.875 -79.930 -40.522 1.00 17.06 N
ATOM 17 C5 G B1108 -132.015 -79.660 -39.763 1.00 17.06 C
ATOM 18 C6 G B1108 -133.047 -80.513 -39.292 1.00 17.06 C
ATOM 19 O6 G B1108 -133.210 -81.735 -39.452 1.00 17.06 O
ATOM 20 N1 G B1108 -133.979 -79.805 -38.565 1.00 17.06 N
ATOM 21 C2 G B1108 -133.937 -78.474 -38.312 1.00 17.06 C
ATOM 22 N2 G B1108 -134.941 -77.991 -37.579 1.00 17.06 N
ATOM 23 N3 G B1108 -132.996 -77.674 -38.736 1.00 17.06 N
ATOM 24 C4 G B1108 -132.070 -78.327 -39.457 1.00 17.06 C
ATOM 25 P G B1109 -128.256 -73.267 -37.940 1.00 18.44 P
ATOM 26 OP1 G B1109 -127.820 -71.991 -38.600 1.00 18.44 O
ATOM 27 OP2 G B1109 -127.230 -74.310 -37.628 1.00 18.44 O
ATOM 28 O5' G B1109 -129.111 -72.947 -36.637 1.00 18.44 O
TER
ATOM 2 P A A1033 -139.747 -88.427 -31.865 1.00 15.21 P
ATOM 3 OP1 A A1033 -141.134 -88.632 -31.340 1.00 15.21 O
ATOM 4 OP2 A A1033 -139.291 -89.234 -33.026 1.00 15.21 O
ATOM 5 O5' A A1033 -139.497 -86.875 -32.141 1.00 15.21 O
ATOM 6 C5' A A1033 -140.281 -86.177 -33.074 1.00 15.21 C
ATOM 7 C4' A A1033 -140.180 -84.714 -32.847 1.00 15.21 C
ATOM 8 O4' A A1033 -138.834 -84.400 -32.466 1.00 15.21 O
ATOM 9 C3' A A1033 -140.438 -83.843 -34.063 1.00 15.21 C
ATOM 10 O3' A A1033 -141.805 -83.623 -34.301 1.00 15.21 O
ATOM 11 C2' A A1033 -139.650 -82.582 -33.760 1.00 15.21 C
ATOM 12 O2' A A1033 -140.340 -81.733 -32.857 1.00 15.21 O
ATOM 13 C1' A A1033 -138.434 -83.187 -33.070 1.00 15.21 C
ATOM 14 N9 A A1033 -137.407 -83.500 -34.054 1.00 14.98 N
ATOM 15 C8 A A1033 -136.960 -84.717 -34.457 1.00 14.98 C
ATOM 16 N7 A A1033 -136.061 -84.626 -35.398 1.00 14.98 N
ATOM 17 C5 A A1033 -135.963 -83.266 -35.613 1.00 14.98 C
ATOM 18 C6 A A1033 -135.182 -82.528 -36.491 1.00 14.98 C
ATOM 19 N6 A A1033 -134.325 -83.132 -37.327 1.00 14.98 N
ATOM 20 N1 A A1033 -135.327 -81.168 -36.458 1.00 14.98 N
ATOM 21 C2 A A1033 -136.199 -80.608 -35.597 1.00 14.98 C
ATOM 22 N3 A A1033 -136.990 -81.216 -34.719 1.00 14.98 N
ATOM 23 C4 A A1033 -136.801 -82.550 -34.798 1.00 14.98 C
ATOM 24 P G A1034 -142.414 -84.001 -35.721 1.00 8.64 P
ATOM 25 OP1 G A1034 -143.876 -83.882 -35.590 1.00 8.64 O
ATOM 26 OP2 G A1034 -141.834 -85.297 -36.123 1.00 8.64 O
ATOM 27 O5' G A1034 -141.865 -82.838 -36.634 1.00 8.64 O
TER
ATOM 1 O3' C B1107 -129.106 -75.961 -45.046 1.00 0.18 O
ATOM 2 P G B1108 -127.821 -76.001 -44.107 1.00 16.70 P
ATOM 3 OP1 G B1108 -126.904 -74.928 -44.584 1.00 16.70 O
ATOM 4 OP2 G B1108 -127.352 -77.410 -44.082 1.00 16.70 O
ATOM 5 O5' G B1108 -128.402 -75.616 -42.694 1.00 16.70 O
ATOM 6 C5' G B1108 -129.290 -74.532 -42.554 1.00 16.70 C
ATOM 7 C4' G B1108 -129.906 -74.531 -41.194 1.00 16.70 C
ATOM 8 O4' G B1108 -130.836 -75.649 -41.097 1.00 16.70 O
ATOM 9 C3' G B1108 -128.912 -74.705 -40.039 1.00 16.70 C
ATOM 10 O3' G B1108 -129.339 -73.938 -38.919 1.00 16.70 O
ATOM 11 C2' G B1108 -129.054 -76.175 -39.706 1.00 16.70 C
ATOM 12 O2' G B1108 -128.665 -76.524 -38.395 1.00 16.70 O
ATOM 13 C1' G B1108 -130.547 -76.363 -39.922 1.00 16.70 C
ATOM 14 N9 G B1108 -130.962 -77.761 -40.062 1.00 17.06 N
ATOM 15 C8 G B1108 -130.270 -78.783 -40.666 1.00 17.06 C
ATOM 16 N7 G B1108 -130.875 -79.930 -40.522 1.00 17.06 N
ATOM 17 C5 G B1108 -132.015 -79.660 -39.763 1.00 17.06 C
ATOM 18 C6 G B1108 -133.047 -80.513 -39.292 1.00 17.06 C
ATOM 19 O6 G B1108 -133.210 -81.735 -39.452 1.00 17.06 O
ATOM 20 N1 G B1108 -133.979 -79.805 -38.565 1.00 17.06 N
ATOM 21 C2 G B1108 -133.937 -78.474 -38.312 1.00 17.06 C
ATOM 22 N2 G B1108 -134.941 -77.991 -37.579 1.00 17.06 N
ATOM 23 N3 G B1108 -132.996 -77.674 -38.736 1.00 17.06 N
ATOM 24 C4 G B1108 -132.070 -78.327 -39.457 1.00 17.06 C
ATOM 25 P G B1109 -128.256 -73.267 -37.940 1.00 18.44 P
ATOM 26 OP1 G B1109 -127.820 -71.991 -38.600 1.00 18.44 O
ATOM 27 OP2 G B1109 -127.230 -74.310 -37.628 1.00 18.44 O
ATOM 28 O5' G B1109 -129.111 -72.947 -36.637 1.00 18.44 O
TER
Atoms:
OP1: (-141.134,-88.632,-31.340)
OP2: (-139.291,-89.234,-33.026)
C3': (-140.438,-83.843,-34.063)
C1': (-138.434,-83.187,-33.070)
C5': (-140.281,-86.177,-33.074)
O4': (-138.834,-84.400,-32.466)
C8: (-136.960,-84.717,-34.457)
O2': (-140.340,-81.733,-32.857)
C6: (-135.182,-82.528,-36.491)
C5: (-135.963,-83.266,-35.613)
C4: (-136.801,-82.550,-34.798)
P: (-139.747,-88.427,-31.865)
C4': (-140.180,-84.714,-32.847)
C2': (-139.650,-82.582,-33.760)
C2: (-136.199,-80.608,-35.597)
N1: (-135.327,-81.168,-36.458)
N3: (-136.990,-81.216,-34.719)
N6: (-134.325,-83.132,-37.327)
N7: (-136.061,-84.626,-35.398)
N9: (-137.407,-83.500,-34.054)
O5': (-139.497,-86.875,-32.141)
O3': (-141.805,-83.623,-34.301)
OP2: (-139.291,-89.234,-33.026)
C3': (-140.438,-83.843,-34.063)
C1': (-138.434,-83.187,-33.070)
C5': (-140.281,-86.177,-33.074)
O4': (-138.834,-84.400,-32.466)
C8: (-136.960,-84.717,-34.457)
O2': (-140.340,-81.733,-32.857)
C6: (-135.182,-82.528,-36.491)
C5: (-135.963,-83.266,-35.613)
C4: (-136.801,-82.550,-34.798)
P: (-139.747,-88.427,-31.865)
C4': (-140.180,-84.714,-32.847)
C2': (-139.650,-82.582,-33.760)
C2: (-136.199,-80.608,-35.597)
N1: (-135.327,-81.168,-36.458)
N3: (-136.990,-81.216,-34.719)
N6: (-134.325,-83.132,-37.327)
N7: (-136.061,-84.626,-35.398)
N9: (-137.407,-83.500,-34.054)
O5': (-139.497,-86.875,-32.141)
O3': (-141.805,-83.623,-34.301)
OP1: (-126.904,-74.928,-44.584)
OP2: (-127.352,-77.410,-44.082)
C3': (-128.912,-74.705,-40.039)
C1': (-130.547,-76.363,-39.922)
C5': (-129.290,-74.532,-42.554)
O6: (-133.210,-81.735,-39.452)
O4': (-130.836,-75.649,-41.097)
C8: (-130.270,-78.783,-40.666)
C2: (-133.937,-78.474,-38.312)
C6: (-133.047,-80.513,-39.292)
C5: (-132.015,-79.660,-39.763)
C4: (-132.070,-78.327,-39.457)
P: (-127.821,-76.001,-44.107)
C4': (-129.906,-74.531,-41.194)
C2': (-129.054,-76.175,-39.706)
O2': (-128.665,-76.524,-38.395)
N1: (-133.979,-79.805,-38.565)
N2: (-134.941,-77.991,-37.579)
N3: (-132.996,-77.674,-38.736)
N7: (-130.875,-79.930,-40.522)
N9: (-130.962,-77.761,-40.062)
O5': (-128.402,-75.616,-42.694)
O3': (-129.339,-73.938,-38.919)
OP2: (-127.352,-77.410,-44.082)
C3': (-128.912,-74.705,-40.039)
C1': (-130.547,-76.363,-39.922)
C5': (-129.290,-74.532,-42.554)
O6: (-133.210,-81.735,-39.452)
O4': (-130.836,-75.649,-41.097)
C8: (-130.270,-78.783,-40.666)
C2: (-133.937,-78.474,-38.312)
C6: (-133.047,-80.513,-39.292)
C5: (-132.015,-79.660,-39.763)
C4: (-132.070,-78.327,-39.457)
P: (-127.821,-76.001,-44.107)
C4': (-129.906,-74.531,-41.194)
C2': (-129.054,-76.175,-39.706)
O2': (-128.665,-76.524,-38.395)
N1: (-133.979,-79.805,-38.565)
N2: (-134.941,-77.991,-37.579)
N3: (-132.996,-77.674,-38.736)
N7: (-130.875,-79.930,-40.522)
N9: (-130.962,-77.761,-40.062)
O5': (-128.402,-75.616,-42.694)
O3': (-129.339,-73.938,-38.919)
Image (generated by PyMOL):