Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0351:0277
Extra
PDB:
ATOM 1 O3' G A 350 52.743 115.383 -6.796 1.00101.01 O
ATOM 2 P A A 351 53.944 114.583 -7.506 1.00100.91 P
ATOM 3 OP1 A A 351 53.374 113.927 -8.709 1.00101.14 O
ATOM 4 OP2 A A 351 54.641 113.760 -6.484 1.00101.09 O
ATOM 5 O5' A A 351 54.953 115.725 -7.973 1.00100.67 O
ATOM 6 C5' A A 351 54.572 116.695 -8.970 1.00101.33 C
ATOM 7 C4' A A 351 55.511 117.878 -8.926 1.00101.42 C
ATOM 8 O4' A A 351 55.449 118.467 -7.599 1.00100.94 O
ATOM 9 C3' A A 351 56.984 117.551 -9.128 1.00101.30 C
ATOM 10 O3' A A 351 57.335 117.489 -10.506 1.00102.04 O
ATOM 11 C2' A A 351 57.675 118.692 -8.396 1.00101.00 C
ATOM 12 O2' A A 351 57.721 119.892 -9.142 1.00100.87 O
ATOM 13 C1' A A 351 56.746 118.866 -7.192 1.00100.97 C
ATOM 14 N9 A A 351 57.150 118.016 -6.073 1.00100.87 N
ATOM 15 C8 A A 351 56.536 116.883 -5.589 1.00101.19 C
ATOM 16 N7 A A 351 57.162 116.334 -4.577 1.00100.81 N
ATOM 17 C5 A A 351 58.260 117.159 -4.379 1.00100.69 C
ATOM 18 C6 A A 351 59.318 117.120 -3.459 1.00100.61 C
ATOM 19 N6 A A 351 59.458 116.176 -2.526 1.00100.38 N
ATOM 20 N1 A A 351 60.243 118.099 -3.531 1.00100.50 N
ATOM 21 C2 A A 351 60.108 119.045 -4.471 1.00 99.74 C
ATOM 22 N3 A A 351 59.168 119.186 -5.391 1.00 99.90 N
ATOM 23 C4 A A 351 58.262 118.201 -5.290 1.00100.56 C
ATOM 24 P C A 352 58.750 116.861 -10.944 1.00102.55 P
ATOM 25 OP1 C A 352 58.846 117.010 -12.421 1.00102.51 O
ATOM 26 OP2 C A 352 58.897 115.514 -10.332 1.00101.94 O
ATOM 27 O5' C A 352 59.824 117.832 -10.281 1.00100.82 O
TER
ATOM 1 O3' A B 276 69.367 120.424 2.460 1.00107.41 O
ATOM 2 P G B 277 68.100 121.063 3.223 1.00107.12 P
ATOM 3 OP1 G B 277 68.640 121.977 4.267 1.00107.03 O
ATOM 4 OP2 G B 277 67.165 119.970 3.613 1.00105.71 O
ATOM 5 O5' G B 277 67.383 121.950 2.107 1.00105.44 O
ATOM 6 C5' G B 277 68.070 123.062 1.496 1.00102.11 C
ATOM 7 C4' G B 277 67.477 123.372 0.140 1.00 99.48 C
ATOM 8 O4' G B 277 67.533 122.175 -0.685 1.00 98.04 O
ATOM 9 C3' G B 277 66.003 123.743 0.118 1.00 98.53 C
ATOM 10 O3' G B 277 65.754 125.097 0.466 1.00 98.34 O
ATOM 11 C2' G B 277 65.623 123.431 -1.320 1.00 96.98 C
ATOM 12 O2' G B 277 66.042 124.424 -2.236 1.00 96.32 O
ATOM 13 C1' G B 277 66.403 122.135 -1.545 1.00 96.09 C
ATOM 14 N9 G B 277 65.585 120.978 -1.191 1.00 93.85 N
ATOM 15 C8 G B 277 65.715 120.148 -0.102 1.00 92.92 C
ATOM 16 N7 G B 277 64.786 119.233 -0.043 1.00 91.69 N
ATOM 17 C5 G B 277 64.004 119.467 -1.165 1.00 91.83 C
ATOM 18 C6 G B 277 62.843 118.807 -1.631 1.00 91.51 C
ATOM 19 O6 G B 277 62.235 117.856 -1.122 1.00 90.71 O
ATOM 20 N1 G B 277 62.383 119.368 -2.816 1.00 91.50 N
ATOM 21 C2 G B 277 62.955 120.430 -3.468 1.00 91.99 C
ATOM 22 N2 G B 277 62.368 120.823 -4.609 1.00 92.35 N
ATOM 23 N3 G B 277 64.026 121.060 -3.038 1.00 92.49 N
ATOM 24 C4 G B 277 64.496 120.530 -1.890 1.00 92.74 C
ATOM 25 P C B 278 64.294 125.517 0.995 1.00 98.77 P
ATOM 26 OP1 C B 278 64.377 126.934 1.437 1.00 99.10 O
ATOM 27 OP2 C B 278 63.819 124.476 1.951 1.00 98.19 O
ATOM 28 O5' C B 278 63.380 125.447 -0.309 1.00 96.90 O
TER
ATOM 2 P A A 351 53.944 114.583 -7.506 1.00100.91 P
ATOM 3 OP1 A A 351 53.374 113.927 -8.709 1.00101.14 O
ATOM 4 OP2 A A 351 54.641 113.760 -6.484 1.00101.09 O
ATOM 5 O5' A A 351 54.953 115.725 -7.973 1.00100.67 O
ATOM 6 C5' A A 351 54.572 116.695 -8.970 1.00101.33 C
ATOM 7 C4' A A 351 55.511 117.878 -8.926 1.00101.42 C
ATOM 8 O4' A A 351 55.449 118.467 -7.599 1.00100.94 O
ATOM 9 C3' A A 351 56.984 117.551 -9.128 1.00101.30 C
ATOM 10 O3' A A 351 57.335 117.489 -10.506 1.00102.04 O
ATOM 11 C2' A A 351 57.675 118.692 -8.396 1.00101.00 C
ATOM 12 O2' A A 351 57.721 119.892 -9.142 1.00100.87 O
ATOM 13 C1' A A 351 56.746 118.866 -7.192 1.00100.97 C
ATOM 14 N9 A A 351 57.150 118.016 -6.073 1.00100.87 N
ATOM 15 C8 A A 351 56.536 116.883 -5.589 1.00101.19 C
ATOM 16 N7 A A 351 57.162 116.334 -4.577 1.00100.81 N
ATOM 17 C5 A A 351 58.260 117.159 -4.379 1.00100.69 C
ATOM 18 C6 A A 351 59.318 117.120 -3.459 1.00100.61 C
ATOM 19 N6 A A 351 59.458 116.176 -2.526 1.00100.38 N
ATOM 20 N1 A A 351 60.243 118.099 -3.531 1.00100.50 N
ATOM 21 C2 A A 351 60.108 119.045 -4.471 1.00 99.74 C
ATOM 22 N3 A A 351 59.168 119.186 -5.391 1.00 99.90 N
ATOM 23 C4 A A 351 58.262 118.201 -5.290 1.00100.56 C
ATOM 24 P C A 352 58.750 116.861 -10.944 1.00102.55 P
ATOM 25 OP1 C A 352 58.846 117.010 -12.421 1.00102.51 O
ATOM 26 OP2 C A 352 58.897 115.514 -10.332 1.00101.94 O
ATOM 27 O5' C A 352 59.824 117.832 -10.281 1.00100.82 O
TER
ATOM 1 O3' A B 276 69.367 120.424 2.460 1.00107.41 O
ATOM 2 P G B 277 68.100 121.063 3.223 1.00107.12 P
ATOM 3 OP1 G B 277 68.640 121.977 4.267 1.00107.03 O
ATOM 4 OP2 G B 277 67.165 119.970 3.613 1.00105.71 O
ATOM 5 O5' G B 277 67.383 121.950 2.107 1.00105.44 O
ATOM 6 C5' G B 277 68.070 123.062 1.496 1.00102.11 C
ATOM 7 C4' G B 277 67.477 123.372 0.140 1.00 99.48 C
ATOM 8 O4' G B 277 67.533 122.175 -0.685 1.00 98.04 O
ATOM 9 C3' G B 277 66.003 123.743 0.118 1.00 98.53 C
ATOM 10 O3' G B 277 65.754 125.097 0.466 1.00 98.34 O
ATOM 11 C2' G B 277 65.623 123.431 -1.320 1.00 96.98 C
ATOM 12 O2' G B 277 66.042 124.424 -2.236 1.00 96.32 O
ATOM 13 C1' G B 277 66.403 122.135 -1.545 1.00 96.09 C
ATOM 14 N9 G B 277 65.585 120.978 -1.191 1.00 93.85 N
ATOM 15 C8 G B 277 65.715 120.148 -0.102 1.00 92.92 C
ATOM 16 N7 G B 277 64.786 119.233 -0.043 1.00 91.69 N
ATOM 17 C5 G B 277 64.004 119.467 -1.165 1.00 91.83 C
ATOM 18 C6 G B 277 62.843 118.807 -1.631 1.00 91.51 C
ATOM 19 O6 G B 277 62.235 117.856 -1.122 1.00 90.71 O
ATOM 20 N1 G B 277 62.383 119.368 -2.816 1.00 91.50 N
ATOM 21 C2 G B 277 62.955 120.430 -3.468 1.00 91.99 C
ATOM 22 N2 G B 277 62.368 120.823 -4.609 1.00 92.35 N
ATOM 23 N3 G B 277 64.026 121.060 -3.038 1.00 92.49 N
ATOM 24 C4 G B 277 64.496 120.530 -1.890 1.00 92.74 C
ATOM 25 P C B 278 64.294 125.517 0.995 1.00 98.77 P
ATOM 26 OP1 C B 278 64.377 126.934 1.437 1.00 99.10 O
ATOM 27 OP2 C B 278 63.819 124.476 1.951 1.00 98.19 O
ATOM 28 O5' C B 278 63.380 125.447 -0.309 1.00 96.90 O
TER
Atoms:
OP1: (53.374,113.927,-8.709)
OP2: (54.641,113.760,-6.484)
C3': (56.984,117.551,-9.128)
C1': (56.746,118.866,-7.192)
C5': (54.572,116.695,-8.970)
O4': (55.449,118.467,-7.599)
C8: (56.536,116.883,-5.589)
O2': (57.721,119.892,-9.142)
C6: (59.318,117.120,-3.459)
C5: (58.260,117.159,-4.379)
C4: (58.262,118.201,-5.290)
P: (53.944,114.583,-7.506)
C4': (55.511,117.878,-8.926)
C2': (57.675,118.692,-8.396)
C2: (60.108,119.045,-4.471)
N1: (60.243,118.099,-3.531)
N3: (59.168,119.186,-5.391)
N6: (59.458,116.176,-2.526)
N7: (57.162,116.334,-4.577)
N9: (57.150,118.016,-6.073)
O5': (54.953,115.725,-7.973)
O3': (57.335,117.489,-10.506)
OP2: (54.641,113.760,-6.484)
C3': (56.984,117.551,-9.128)
C1': (56.746,118.866,-7.192)
C5': (54.572,116.695,-8.970)
O4': (55.449,118.467,-7.599)
C8: (56.536,116.883,-5.589)
O2': (57.721,119.892,-9.142)
C6: (59.318,117.120,-3.459)
C5: (58.260,117.159,-4.379)
C4: (58.262,118.201,-5.290)
P: (53.944,114.583,-7.506)
C4': (55.511,117.878,-8.926)
C2': (57.675,118.692,-8.396)
C2: (60.108,119.045,-4.471)
N1: (60.243,118.099,-3.531)
N3: (59.168,119.186,-5.391)
N6: (59.458,116.176,-2.526)
N7: (57.162,116.334,-4.577)
N9: (57.150,118.016,-6.073)
O5': (54.953,115.725,-7.973)
O3': (57.335,117.489,-10.506)
OP1: (68.640,121.977,4.267)
OP2: (67.165,119.970,3.613)
C3': (66.003,123.743,0.118)
C1': (66.403,122.135,-1.545)
C5': (68.070,123.062,1.496)
O6: (62.235,117.856,-1.122)
O4': (67.533,122.175,-0.685)
C8: (65.715,120.148,-0.102)
C2: (62.955,120.430,-3.468)
C6: (62.843,118.807,-1.631)
C5: (64.004,119.467,-1.165)
C4: (64.496,120.530,-1.890)
P: (68.100,121.063,3.223)
C4': (67.477,123.372,0.140)
C2': (65.623,123.431,-1.320)
O2': (66.042,124.424,-2.236)
N1: (62.383,119.368,-2.816)
N2: (62.368,120.823,-4.609)
N3: (64.026,121.060,-3.038)
N7: (64.786,119.233,-0.043)
N9: (65.585,120.978,-1.191)
O5': (67.383,121.950,2.107)
O3': (65.754,125.097,0.466)
OP2: (67.165,119.970,3.613)
C3': (66.003,123.743,0.118)
C1': (66.403,122.135,-1.545)
C5': (68.070,123.062,1.496)
O6: (62.235,117.856,-1.122)
O4': (67.533,122.175,-0.685)
C8: (65.715,120.148,-0.102)
C2: (62.955,120.430,-3.468)
C6: (62.843,118.807,-1.631)
C5: (64.004,119.467,-1.165)
C4: (64.496,120.530,-1.890)
P: (68.100,121.063,3.223)
C4': (67.477,123.372,0.140)
C2': (65.623,123.431,-1.320)
O2': (66.042,124.424,-2.236)
N1: (62.383,119.368,-2.816)
N2: (62.368,120.823,-4.609)
N3: (64.026,121.060,-3.038)
N7: (64.786,119.233,-0.043)
N9: (65.585,120.978,-1.191)
O5': (67.383,121.950,2.107)
O3': (65.754,125.097,0.466)
Image (generated by PyMOL):