Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1212:A917
Extra
PDB:
ATOM 1 O3' U A1211 245.164 125.438 -3.091 1.00 74.07 O
ATOM 2 P A A1212 245.598 126.051 -4.513 1.00 74.79 P
ATOM 3 OP1 A A1212 246.770 126.942 -4.257 1.00 75.35 O
ATOM 4 OP2 A A1212 244.390 126.608 -5.176 1.00 73.52 O
ATOM 5 O5' A A1212 246.128 124.746 -5.265 1.00 73.67 O
ATOM 6 C5' A A1212 246.161 124.629 -6.696 1.00 73.15 C
ATOM 7 C4' A A1212 246.617 123.234 -7.065 1.00 73.50 C
ATOM 8 O4' A A1212 245.622 122.275 -6.618 1.00 74.05 O
ATOM 9 C3' A A1212 246.809 122.938 -8.543 1.00 73.14 C
ATOM 10 O3' A A1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 11 C2' A A1212 246.628 121.423 -8.594 1.00 72.79 C
ATOM 12 O2' A A1212 247.778 120.717 -8.186 1.00 71.65 O
ATOM 13 C1' A A1212 245.536 121.201 -7.544 1.00 73.65 C
ATOM 14 N9 A A1212 244.186 121.198 -8.132 1.00 73.46 N
ATOM 15 C8 A A1212 243.295 122.245 -8.189 1.00 72.39 C
ATOM 16 N7 A A1212 242.180 121.960 -8.814 1.00 71.08 N
ATOM 17 C5 A A1212 242.338 120.634 -9.188 1.00 70.54 C
ATOM 18 C6 A A1212 241.505 119.751 -9.887 1.00 69.30 C
ATOM 19 N6 A A1212 240.310 120.092 -10.372 1.00 67.58 N
ATOM 20 N1 A A1212 241.947 118.492 -10.082 1.00 69.58 N
ATOM 21 C2 A A1212 243.155 118.160 -9.620 1.00 70.93 C
ATOM 22 N3 A A1212 244.039 118.905 -8.958 1.00 72.40 N
ATOM 23 C4 A A1212 243.562 120.147 -8.767 1.00 71.86 C
ATOM 24 P C A1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 25 OP1 C A1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 26 OP2 C A1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 27 O5' C A1213 248.559 123.280 -11.451 1.00 75.45 O
TER
ATOM 1 O3' G B 916 232.914 111.966 -10.253 1.00 71.18 O
ATOM 2 P G B 917 234.293 111.776 -9.460 1.00 72.17 P
ATOM 3 OP1 G B 917 234.271 110.454 -8.726 1.00 70.69 O
ATOM 4 OP2 G B 917 234.505 113.023 -8.687 1.00 74.91 O
ATOM 5 O5' G B 917 235.357 111.700 -10.624 1.00 70.08 O
ATOM 6 C5' G B 917 235.422 110.540 -11.475 1.00 69.26 C
ATOM 7 C4' G B 917 236.777 110.446 -12.133 1.00 67.52 C
ATOM 8 O4' G B 917 236.904 111.483 -13.140 1.00 66.66 O
ATOM 9 C3' G B 917 237.953 110.648 -11.195 1.00 66.62 C
ATOM 10 O3' G B 917 238.322 109.438 -10.572 1.00 67.09 O
ATOM 11 C2' G B 917 239.036 111.154 -12.128 1.00 65.68 C
ATOM 12 O2' G B 917 239.635 110.065 -12.786 1.00 63.90 O
ATOM 13 C1' G B 917 238.227 111.985 -13.136 1.00 66.62 C
ATOM 14 N9 G B 917 238.159 113.423 -12.858 1.00 66.73 N
ATOM 15 C8 G B 917 237.072 114.246 -13.048 1.00 66.83 C
ATOM 16 N7 G B 917 237.300 115.488 -12.713 1.00 66.41 N
ATOM 17 C5 G B 917 238.617 115.491 -12.279 1.00 66.84 C
ATOM 18 C6 G B 917 239.421 116.556 -11.798 1.00 66.88 C
ATOM 19 O6 G B 917 239.122 117.748 -11.676 1.00 66.13 O
ATOM 20 N1 G B 917 240.698 116.119 -11.449 1.00 66.13 N
ATOM 21 C2 G B 917 241.145 114.826 -11.551 1.00 66.08 C
ATOM 22 N2 G B 917 242.394 114.603 -11.141 1.00 65.47 N
ATOM 23 N3 G B 917 240.413 113.824 -12.014 1.00 67.14 N
ATOM 24 C4 G B 917 239.165 114.225 -12.356 1.00 67.04 C
ATOM 25 P A B 918 238.942 109.470 -9.089 1.00 68.66 P
ATOM 26 OP1 A B 918 239.436 108.092 -8.771 1.00 67.01 O
ATOM 27 OP2 A B 918 237.962 110.128 -8.176 1.00 70.33 O
ATOM 28 O5' A B 918 240.178 110.441 -9.243 1.00 66.67 O
TER
ATOM 2 P A A1212 245.598 126.051 -4.513 1.00 74.79 P
ATOM 3 OP1 A A1212 246.770 126.942 -4.257 1.00 75.35 O
ATOM 4 OP2 A A1212 244.390 126.608 -5.176 1.00 73.52 O
ATOM 5 O5' A A1212 246.128 124.746 -5.265 1.00 73.67 O
ATOM 6 C5' A A1212 246.161 124.629 -6.696 1.00 73.15 C
ATOM 7 C4' A A1212 246.617 123.234 -7.065 1.00 73.50 C
ATOM 8 O4' A A1212 245.622 122.275 -6.618 1.00 74.05 O
ATOM 9 C3' A A1212 246.809 122.938 -8.543 1.00 73.14 C
ATOM 10 O3' A A1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 11 C2' A A1212 246.628 121.423 -8.594 1.00 72.79 C
ATOM 12 O2' A A1212 247.778 120.717 -8.186 1.00 71.65 O
ATOM 13 C1' A A1212 245.536 121.201 -7.544 1.00 73.65 C
ATOM 14 N9 A A1212 244.186 121.198 -8.132 1.00 73.46 N
ATOM 15 C8 A A1212 243.295 122.245 -8.189 1.00 72.39 C
ATOM 16 N7 A A1212 242.180 121.960 -8.814 1.00 71.08 N
ATOM 17 C5 A A1212 242.338 120.634 -9.188 1.00 70.54 C
ATOM 18 C6 A A1212 241.505 119.751 -9.887 1.00 69.30 C
ATOM 19 N6 A A1212 240.310 120.092 -10.372 1.00 67.58 N
ATOM 20 N1 A A1212 241.947 118.492 -10.082 1.00 69.58 N
ATOM 21 C2 A A1212 243.155 118.160 -9.620 1.00 70.93 C
ATOM 22 N3 A A1212 244.039 118.905 -8.958 1.00 72.40 N
ATOM 23 C4 A A1212 243.562 120.147 -8.767 1.00 71.86 C
ATOM 24 P C A1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 25 OP1 C A1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 26 OP2 C A1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 27 O5' C A1213 248.559 123.280 -11.451 1.00 75.45 O
TER
ATOM 1 O3' G B 916 232.914 111.966 -10.253 1.00 71.18 O
ATOM 2 P G B 917 234.293 111.776 -9.460 1.00 72.17 P
ATOM 3 OP1 G B 917 234.271 110.454 -8.726 1.00 70.69 O
ATOM 4 OP2 G B 917 234.505 113.023 -8.687 1.00 74.91 O
ATOM 5 O5' G B 917 235.357 111.700 -10.624 1.00 70.08 O
ATOM 6 C5' G B 917 235.422 110.540 -11.475 1.00 69.26 C
ATOM 7 C4' G B 917 236.777 110.446 -12.133 1.00 67.52 C
ATOM 8 O4' G B 917 236.904 111.483 -13.140 1.00 66.66 O
ATOM 9 C3' G B 917 237.953 110.648 -11.195 1.00 66.62 C
ATOM 10 O3' G B 917 238.322 109.438 -10.572 1.00 67.09 O
ATOM 11 C2' G B 917 239.036 111.154 -12.128 1.00 65.68 C
ATOM 12 O2' G B 917 239.635 110.065 -12.786 1.00 63.90 O
ATOM 13 C1' G B 917 238.227 111.985 -13.136 1.00 66.62 C
ATOM 14 N9 G B 917 238.159 113.423 -12.858 1.00 66.73 N
ATOM 15 C8 G B 917 237.072 114.246 -13.048 1.00 66.83 C
ATOM 16 N7 G B 917 237.300 115.488 -12.713 1.00 66.41 N
ATOM 17 C5 G B 917 238.617 115.491 -12.279 1.00 66.84 C
ATOM 18 C6 G B 917 239.421 116.556 -11.798 1.00 66.88 C
ATOM 19 O6 G B 917 239.122 117.748 -11.676 1.00 66.13 O
ATOM 20 N1 G B 917 240.698 116.119 -11.449 1.00 66.13 N
ATOM 21 C2 G B 917 241.145 114.826 -11.551 1.00 66.08 C
ATOM 22 N2 G B 917 242.394 114.603 -11.141 1.00 65.47 N
ATOM 23 N3 G B 917 240.413 113.824 -12.014 1.00 67.14 N
ATOM 24 C4 G B 917 239.165 114.225 -12.356 1.00 67.04 C
ATOM 25 P A B 918 238.942 109.470 -9.089 1.00 68.66 P
ATOM 26 OP1 A B 918 239.436 108.092 -8.771 1.00 67.01 O
ATOM 27 OP2 A B 918 237.962 110.128 -8.176 1.00 70.33 O
ATOM 28 O5' A B 918 240.178 110.441 -9.243 1.00 66.67 O
TER
Atoms:
OP1: (246.770,126.942,-4.257)
OP2: (244.390,126.608,-5.176)
C3': (246.809,122.938,-8.543)
C1': (245.536,121.201,-7.544)
C5': (246.161,124.629,-6.696)
O4': (245.622,122.275,-6.618)
C8: (243.295,122.245,-8.189)
O2': (247.778,120.717,-8.186)
C6: (241.505,119.751,-9.887)
C5: (242.338,120.634,-9.188)
C4: (243.562,120.147,-8.767)
P: (245.598,126.051,-4.513)
C4': (246.617,123.234,-7.065)
C2': (246.628,121.423,-8.594)
C2: (243.155,118.160,-9.620)
N1: (241.947,118.492,-10.082)
N3: (244.039,118.905,-8.958)
N6: (240.310,120.092,-10.372)
N7: (242.180,121.960,-8.814)
N9: (244.186,121.198,-8.132)
O5': (246.128,124.746,-5.265)
O3': (248.096,123.349,-8.976)
OP2: (244.390,126.608,-5.176)
C3': (246.809,122.938,-8.543)
C1': (245.536,121.201,-7.544)
C5': (246.161,124.629,-6.696)
O4': (245.622,122.275,-6.618)
C8: (243.295,122.245,-8.189)
O2': (247.778,120.717,-8.186)
C6: (241.505,119.751,-9.887)
C5: (242.338,120.634,-9.188)
C4: (243.562,120.147,-8.767)
P: (245.598,126.051,-4.513)
C4': (246.617,123.234,-7.065)
C2': (246.628,121.423,-8.594)
C2: (243.155,118.160,-9.620)
N1: (241.947,118.492,-10.082)
N3: (244.039,118.905,-8.958)
N6: (240.310,120.092,-10.372)
N7: (242.180,121.960,-8.814)
N9: (244.186,121.198,-8.132)
O5': (246.128,124.746,-5.265)
O3': (248.096,123.349,-8.976)
OP1: (234.271,110.454,-8.726)
OP2: (234.505,113.023,-8.687)
C3': (237.953,110.648,-11.195)
C1': (238.227,111.985,-13.136)
C5': (235.422,110.540,-11.475)
O6: (239.122,117.748,-11.676)
O4': (236.904,111.483,-13.140)
C8: (237.072,114.246,-13.048)
C2: (241.145,114.826,-11.551)
C6: (239.421,116.556,-11.798)
C5: (238.617,115.491,-12.279)
C4: (239.165,114.225,-12.356)
P: (234.293,111.776,-9.460)
C4': (236.777,110.446,-12.133)
C2': (239.036,111.154,-12.128)
O2': (239.635,110.065,-12.786)
N1: (240.698,116.119,-11.449)
N2: (242.394,114.603,-11.141)
N3: (240.413,113.824,-12.014)
N7: (237.300,115.488,-12.713)
N9: (238.159,113.423,-12.858)
O5': (235.357,111.700,-10.624)
O3': (238.322,109.438,-10.572)
OP2: (234.505,113.023,-8.687)
C3': (237.953,110.648,-11.195)
C1': (238.227,111.985,-13.136)
C5': (235.422,110.540,-11.475)
O6: (239.122,117.748,-11.676)
O4': (236.904,111.483,-13.140)
C8: (237.072,114.246,-13.048)
C2: (241.145,114.826,-11.551)
C6: (239.421,116.556,-11.798)
C5: (238.617,115.491,-12.279)
C4: (239.165,114.225,-12.356)
P: (234.293,111.776,-9.460)
C4': (236.777,110.446,-12.133)
C2': (239.036,111.154,-12.128)
O2': (239.635,110.065,-12.786)
N1: (240.698,116.119,-11.449)
N2: (242.394,114.603,-11.141)
N3: (240.413,113.824,-12.014)
N7: (237.300,115.488,-12.713)
N9: (238.159,113.423,-12.858)
O5': (235.357,111.700,-10.624)
O3': (238.322,109.438,-10.572)
Image (generated by PyMOL):