Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1WVD:A15:B8
Extra
PDB:
ATOM 1 O3' C A 14 52.560 19.622 24.312 1.00 54.93 O
ATOM 2 P A A 15 51.115 19.008 23.934 1.00 58.02 P
ATOM 3 OP1 A A 15 50.059 19.686 24.755 1.00 59.03 O
ATOM 4 OP2 A A 15 51.221 17.511 23.977 1.00 58.15 O
ATOM 5 O5' A A 15 50.907 19.403 22.410 1.00 54.47 O
ATOM 6 C5' A A 15 51.277 20.681 21.945 1.00 52.33 C
ATOM 7 C4' A A 15 51.526 20.612 20.475 1.00 52.39 C
ATOM 8 O4' A A 15 52.651 19.738 20.284 1.00 51.91 O
ATOM 9 C3' A A 15 50.434 19.939 19.666 1.00 51.73 C
ATOM 10 O3' A A 15 49.404 20.826 19.285 1.00 51.27 O
ATOM 11 C2' A A 15 51.185 19.472 18.433 1.00 51.96 C
ATOM 12 O2' A A 15 51.371 20.520 17.512 1.00 54.37 O
ATOM 13 C1' A A 15 52.539 19.098 19.027 1.00 52.17 C
ATOM 14 N9 A A 15 52.780 17.673 19.219 1.00 51.87 N
ATOM 15 C8 A A 15 52.778 16.972 20.406 1.00 51.05 C
ATOM 16 N7 A A 15 53.130 15.718 20.280 1.00 51.49 N
ATOM 17 C5 A A 15 53.360 15.575 18.912 1.00 51.97 C
ATOM 18 C6 A A 15 53.781 14.487 18.140 1.00 50.91 C
ATOM 19 N6 A A 15 54.120 13.327 18.667 1.00 50.94 N
ATOM 20 N1 A A 15 53.866 14.651 16.800 1.00 50.56 N
ATOM 21 C2 A A 15 53.586 15.860 16.285 1.00 49.95 C
ATOM 22 N3 A A 15 53.218 16.982 16.916 1.00 50.65 N
ATOM 23 C4 A A 15 53.117 16.766 18.244 1.00 51.72 C
ATOM 24 P C A 16 47.964 20.231 18.878 1.00 52.73 P
ATOM 25 OP1 C A 16 47.046 21.374 18.589 1.00 54.21 O
ATOM 26 OP2 C A 16 47.617 19.283 19.969 1.00 53.60 O
ATOM 27 O5' C A 16 48.218 19.417 17.530 1.00 49.74 O
TER
ATOM 1 O3' A B 7 61.356 6.367 12.289 0.50 47.44 O
ATOM 2 P G B 8 61.241 7.942 12.102 0.50 45.59 P
ATOM 3 OP1 G B 8 61.888 8.262 10.812 0.50 45.86 O
ATOM 4 OP2 G B 8 61.736 8.574 13.367 0.50 45.47 O
ATOM 5 O5' G B 8 59.683 8.176 11.913 0.50 44.41 O
ATOM 6 C5' G B 8 59.066 7.899 10.655 0.50 42.10 C
ATOM 7 C4' G B 8 58.092 8.989 10.307 0.50 41.65 C
ATOM 8 O4' G B 8 56.822 8.776 10.967 0.50 41.40 O
ATOM 9 C3' G B 8 58.501 10.376 10.757 0.50 40.79 C
ATOM 10 O3' G B 8 59.470 10.929 9.890 0.50 40.75 O
ATOM 11 C2' G B 8 57.171 11.106 10.703 0.50 40.85 C
ATOM 12 O2' G B 8 56.774 11.401 9.383 0.50 39.90 O
ATOM 13 C1' G B 8 56.236 10.033 11.266 0.50 41.54 C
ATOM 14 N9 G B 8 56.137 10.163 12.716 0.50 42.70 N
ATOM 15 C8 G B 8 56.705 9.360 13.686 0.50 42.74 C
ATOM 16 N7 G B 8 56.484 9.789 14.900 0.50 42.04 N
ATOM 17 C5 G B 8 55.714 10.934 14.716 0.50 43.18 C
ATOM 18 C6 G B 8 55.186 11.842 15.658 0.50 43.86 C
ATOM 19 O6 G B 8 55.293 11.818 16.890 0.50 45.59 O
ATOM 20 N1 G B 8 54.474 12.866 15.037 0.50 43.35 N
ATOM 21 C2 G B 8 54.299 12.995 13.679 0.50 43.15 C
ATOM 22 N2 G B 8 53.597 14.049 13.267 0.50 43.31 N
ATOM 23 N3 G B 8 54.783 12.155 12.791 0.50 42.40 N
ATOM 24 C4 G B 8 55.479 11.160 13.374 0.50 42.63 C
TER
ATOM 2 P A A 15 51.115 19.008 23.934 1.00 58.02 P
ATOM 3 OP1 A A 15 50.059 19.686 24.755 1.00 59.03 O
ATOM 4 OP2 A A 15 51.221 17.511 23.977 1.00 58.15 O
ATOM 5 O5' A A 15 50.907 19.403 22.410 1.00 54.47 O
ATOM 6 C5' A A 15 51.277 20.681 21.945 1.00 52.33 C
ATOM 7 C4' A A 15 51.526 20.612 20.475 1.00 52.39 C
ATOM 8 O4' A A 15 52.651 19.738 20.284 1.00 51.91 O
ATOM 9 C3' A A 15 50.434 19.939 19.666 1.00 51.73 C
ATOM 10 O3' A A 15 49.404 20.826 19.285 1.00 51.27 O
ATOM 11 C2' A A 15 51.185 19.472 18.433 1.00 51.96 C
ATOM 12 O2' A A 15 51.371 20.520 17.512 1.00 54.37 O
ATOM 13 C1' A A 15 52.539 19.098 19.027 1.00 52.17 C
ATOM 14 N9 A A 15 52.780 17.673 19.219 1.00 51.87 N
ATOM 15 C8 A A 15 52.778 16.972 20.406 1.00 51.05 C
ATOM 16 N7 A A 15 53.130 15.718 20.280 1.00 51.49 N
ATOM 17 C5 A A 15 53.360 15.575 18.912 1.00 51.97 C
ATOM 18 C6 A A 15 53.781 14.487 18.140 1.00 50.91 C
ATOM 19 N6 A A 15 54.120 13.327 18.667 1.00 50.94 N
ATOM 20 N1 A A 15 53.866 14.651 16.800 1.00 50.56 N
ATOM 21 C2 A A 15 53.586 15.860 16.285 1.00 49.95 C
ATOM 22 N3 A A 15 53.218 16.982 16.916 1.00 50.65 N
ATOM 23 C4 A A 15 53.117 16.766 18.244 1.00 51.72 C
ATOM 24 P C A 16 47.964 20.231 18.878 1.00 52.73 P
ATOM 25 OP1 C A 16 47.046 21.374 18.589 1.00 54.21 O
ATOM 26 OP2 C A 16 47.617 19.283 19.969 1.00 53.60 O
ATOM 27 O5' C A 16 48.218 19.417 17.530 1.00 49.74 O
TER
ATOM 1 O3' A B 7 61.356 6.367 12.289 0.50 47.44 O
ATOM 2 P G B 8 61.241 7.942 12.102 0.50 45.59 P
ATOM 3 OP1 G B 8 61.888 8.262 10.812 0.50 45.86 O
ATOM 4 OP2 G B 8 61.736 8.574 13.367 0.50 45.47 O
ATOM 5 O5' G B 8 59.683 8.176 11.913 0.50 44.41 O
ATOM 6 C5' G B 8 59.066 7.899 10.655 0.50 42.10 C
ATOM 7 C4' G B 8 58.092 8.989 10.307 0.50 41.65 C
ATOM 8 O4' G B 8 56.822 8.776 10.967 0.50 41.40 O
ATOM 9 C3' G B 8 58.501 10.376 10.757 0.50 40.79 C
ATOM 10 O3' G B 8 59.470 10.929 9.890 0.50 40.75 O
ATOM 11 C2' G B 8 57.171 11.106 10.703 0.50 40.85 C
ATOM 12 O2' G B 8 56.774 11.401 9.383 0.50 39.90 O
ATOM 13 C1' G B 8 56.236 10.033 11.266 0.50 41.54 C
ATOM 14 N9 G B 8 56.137 10.163 12.716 0.50 42.70 N
ATOM 15 C8 G B 8 56.705 9.360 13.686 0.50 42.74 C
ATOM 16 N7 G B 8 56.484 9.789 14.900 0.50 42.04 N
ATOM 17 C5 G B 8 55.714 10.934 14.716 0.50 43.18 C
ATOM 18 C6 G B 8 55.186 11.842 15.658 0.50 43.86 C
ATOM 19 O6 G B 8 55.293 11.818 16.890 0.50 45.59 O
ATOM 20 N1 G B 8 54.474 12.866 15.037 0.50 43.35 N
ATOM 21 C2 G B 8 54.299 12.995 13.679 0.50 43.15 C
ATOM 22 N2 G B 8 53.597 14.049 13.267 0.50 43.31 N
ATOM 23 N3 G B 8 54.783 12.155 12.791 0.50 42.40 N
ATOM 24 C4 G B 8 55.479 11.160 13.374 0.50 42.63 C
TER
Atoms:
OP1: (50.059,19.686,24.755)
OP2: (51.221,17.511,23.977)
C3': (50.434,19.939,19.666)
C1': (52.539,19.098,19.027)
C5': (51.277,20.681,21.945)
O4': (52.651,19.738,20.284)
C8: (52.778,16.972,20.406)
O2': (51.371,20.520,17.512)
C6: (53.781,14.487,18.140)
C5: (53.360,15.575,18.912)
C4: (53.117,16.766,18.244)
P: (51.115,19.008,23.934)
C4': (51.526,20.612,20.475)
C2': (51.185,19.472,18.433)
C2: (53.586,15.860,16.285)
N1: (53.866,14.651,16.800)
N3: (53.218,16.982,16.916)
N6: (54.120,13.327,18.667)
N7: (53.130,15.718,20.280)
N9: (52.780,17.673,19.219)
O5': (50.907,19.403,22.410)
O3': (49.404,20.826,19.285)
OP2: (51.221,17.511,23.977)
C3': (50.434,19.939,19.666)
C1': (52.539,19.098,19.027)
C5': (51.277,20.681,21.945)
O4': (52.651,19.738,20.284)
C8: (52.778,16.972,20.406)
O2': (51.371,20.520,17.512)
C6: (53.781,14.487,18.140)
C5: (53.360,15.575,18.912)
C4: (53.117,16.766,18.244)
P: (51.115,19.008,23.934)
C4': (51.526,20.612,20.475)
C2': (51.185,19.472,18.433)
C2: (53.586,15.860,16.285)
N1: (53.866,14.651,16.800)
N3: (53.218,16.982,16.916)
N6: (54.120,13.327,18.667)
N7: (53.130,15.718,20.280)
N9: (52.780,17.673,19.219)
O5': (50.907,19.403,22.410)
O3': (49.404,20.826,19.285)
OP1: (61.888,8.262,10.812)
OP2: (61.736,8.574,13.367)
C3': (58.501,10.376,10.757)
C1': (56.236,10.033,11.266)
C5': (59.066,7.899,10.655)
O6: (55.293,11.818,16.890)
O4': (56.822,8.776,10.967)
C8: (56.705,9.360,13.686)
C2: (54.299,12.995,13.679)
C6: (55.186,11.842,15.658)
C5: (55.714,10.934,14.716)
C4: (55.479,11.160,13.374)
P: (61.241,7.942,12.102)
C4': (58.092,8.989,10.307)
C2': (57.171,11.106,10.703)
O2': (56.774,11.401,9.383)
N1: (54.474,12.866,15.037)
N2: (53.597,14.049,13.267)
N3: (54.783,12.155,12.791)
N7: (56.484,9.789,14.900)
N9: (56.137,10.163,12.716)
O5': (59.683,8.176,11.913)
O3': (59.470,10.929,9.890)
OP2: (61.736,8.574,13.367)
C3': (58.501,10.376,10.757)
C1': (56.236,10.033,11.266)
C5': (59.066,7.899,10.655)
O6: (55.293,11.818,16.890)
O4': (56.822,8.776,10.967)
C8: (56.705,9.360,13.686)
C2: (54.299,12.995,13.679)
C6: (55.186,11.842,15.658)
C5: (55.714,10.934,14.716)
C4: (55.479,11.160,13.374)
P: (61.241,7.942,12.102)
C4': (58.092,8.989,10.307)
C2': (57.171,11.106,10.703)
O2': (56.774,11.401,9.383)
N1: (54.474,12.866,15.037)
N2: (53.597,14.049,13.267)
N3: (54.783,12.155,12.791)
N7: (56.484,9.789,14.900)
N9: (56.137,10.163,12.716)
O5': (59.683,8.176,11.913)
O3': (59.470,10.929,9.890)
Image (generated by PyMOL):