ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A587:A572

Extra

PDB:
ATOM 1 O3' G A 586 186.470 -90.887-125.185 1.00 37.90 O
ATOM 2 P A A 587 187.600 -91.987-124.834 1.00 51.38 P
ATOM 3 OP1 A A 587 188.846 -91.551-125.525 1.00 36.86 O
ATOM 4 OP2 A A 587 187.021 -93.349-125.157 1.00 31.70 O
ATOM 5 O5' A A 587 187.775 -91.818-123.257 1.00 25.03 O
ATOM 6 C5' A A 587 188.367 -90.646-122.732 1.00 26.44 C
ATOM 7 C4' A A 587 188.239 -90.598-121.252 1.00 27.78 C
ATOM 8 O4' A A 587 186.826 -90.600-120.901 1.00 33.35 O
ATOM 9 C3' A A 587 188.836 -91.793-120.498 1.00 30.72 C
ATOM 10 O3' A A 587 190.230 -91.640-120.234 1.00 34.27 O
ATOM 11 C2' A A 587 188.003 -91.849-119.229 1.00 38.77 C
ATOM 12 O2' A A 587 188.522 -90.942-118.266 1.00 49.16 O
ATOM 13 C1' A A 587 186.629 -91.333-119.709 1.00 33.43 C
ATOM 14 N9 A A 587 185.699 -92.439-119.981 1.00 22.89 N
ATOM 15 C8 A A 587 185.651 -93.269-121.074 1.00 27.22 C
ATOM 16 N7 A A 587 184.712 -94.199-121.006 1.00 26.22 N
ATOM 17 C5 A A 587 184.100 -93.952-119.781 1.00 31.24 C
ATOM 18 C6 A A 587 183.029 -94.570-119.089 1.00 30.02 C
ATOM 19 N6 A A 587 182.336 -95.611-119.542 1.00 31.57 N
ATOM 20 N1 A A 587 182.666 -94.074-117.886 1.00 31.82 N
ATOM 21 C2 A A 587 183.353 -93.034-117.409 1.00 30.26 C
ATOM 22 N3 A A 587 184.381 -92.365-117.949 1.00 37.56 N
ATOM 23 C4 A A 587 184.709 -92.877-119.145 1.00 30.71 C
ATOM 24 P G A 588 191.322 -92.556-121.009 1.00 49.44 P
ATOM 25 OP1 G A 588 192.482 -91.662-121.367 1.00 33.09 O
ATOM 26 OP2 G A 588 190.579 -93.270-122.103 1.00 34.36 O
ATOM 27 O5' G A 588 191.784 -93.595-119.891 1.00 36.61 O
TER

ATOM 1 O3' U B 571 172.601 -99.838-111.486 1.00 33.59 O
ATOM 2 P G B 572 172.697 -98.267-111.282 1.00 41.13 P
ATOM 3 OP1 G B 572 173.213 -98.042-109.892 1.00 34.49 O
ATOM 4 OP2 G B 572 171.374 -97.688-111.669 1.00 41.88 O
ATOM 5 O5' G B 572 173.810 -97.862-112.345 1.00 44.14 O
ATOM 6 C5' G B 572 175.076 -98.518-112.337 1.00 39.19 C
ATOM 7 C4' G B 572 176.128 -97.708-111.622 1.00 22.97 C
ATOM 8 O4' G B 572 177.416 -98.287-111.896 1.00 30.21 O
ATOM 9 C3' G B 572 176.236 -96.253-112.058 1.00 27.16 C
ATOM 10 O3' G B 572 175.451 -95.401-111.265 1.00 39.60 O
ATOM 11 C2' G B 572 177.711 -95.937-111.960 1.00 32.44 C
ATOM 12 O2' G B 572 178.042 -95.541-110.634 1.00 36.81 O
ATOM 13 C1' G B 572 178.341 -97.291-112.245 1.00 35.32 C
ATOM 14 N9 G B 572 178.671 -97.458-113.670 1.00 37.45 N
ATOM 15 C8 G B 572 178.191 -98.454-114.513 1.00 33.99 C
ATOM 16 N7 G B 572 178.663 -98.342-115.737 1.00 37.28 N
ATOM 17 C5 G B 572 179.525 -97.225-115.674 1.00 35.58 C
ATOM 18 C6 G B 572 180.342 -96.615-116.666 1.00 30.57 C
ATOM 19 O6 G B 572 180.521 -96.902-117.859 1.00 42.02 O
ATOM 20 N1 G B 572 181.006 -95.526-116.182 1.00 27.95 N
ATOM 21 C2 G B 572 180.927 -95.071-114.914 1.00 33.93 C
ATOM 22 N2 G B 572 181.690 -93.999-114.682 1.00 43.51 N
ATOM 23 N3 G B 572 180.185 -95.597-113.961 1.00 31.40 N
ATOM 24 C4 G B 572 179.524 -96.670-114.410 1.00 32.84 C
ATOM 25 P C B 573 174.671 -94.167-111.946 1.00 56.89 P
ATOM 26 OP1 C B 573 173.933 -93.473-110.839 1.00 49.16 O
ATOM 27 OP2 C B 573 173.890 -94.726-113.111 1.00 40.62 O
ATOM 28 O5' C B 573 175.859 -93.225-112.472 1.00 32.49 O
TER

Atoms:
OP1: (188.846,-91.551,-125.525)
OP2: (187.021,-93.349,-125.157)
C3': (188.836,-91.793,-120.498)
C1': (186.629,-91.333,-119.709)
C5': (188.367,-90.646,-122.732)
O4': (186.826,-90.600,-120.901)
C8: (185.651,-93.269,-121.074)
O2': (188.522,-90.942,-118.266)
C6: (183.029,-94.570,-119.089)
C5: (184.100,-93.952,-119.781)
C4: (184.709,-92.877,-119.145)
P: (187.600,-91.987,-124.834)
C4': (188.239,-90.598,-121.252)
C2': (188.003,-91.849,-119.229)
C2: (183.353,-93.034,-117.409)
N1: (182.666,-94.074,-117.886)
N3: (184.381,-92.365,-117.949)
N6: (182.336,-95.611,-119.542)
N7: (184.712,-94.199,-121.006)
N9: (185.699,-92.439,-119.981)
O5': (187.775,-91.818,-123.257)
O3': (190.230,-91.640,-120.234)
OP1: (173.213,-98.042,-109.892)
OP2: (171.374,-97.688,-111.669)
C3': (176.236,-96.253,-112.058)
C1': (178.341,-97.291,-112.245)
C5': (175.076,-98.518,-112.337)
O6: (180.521,-96.902,-117.859)
O4': (177.416,-98.287,-111.896)
C8: (178.191,-98.454,-114.513)
C2: (180.927,-95.071,-114.914)
C6: (180.342,-96.615,-116.666)
C5: (179.525,-97.225,-115.674)
C4: (179.524,-96.670,-114.410)
P: (172.697,-98.267,-111.282)
C4': (176.128,-97.708,-111.622)
C2': (177.711,-95.937,-111.960)
O2': (178.042,-95.541,-110.634)
N1: (181.006,-95.526,-116.182)
N2: (181.690,-93.999,-114.682)
N3: (180.185,-95.597,-113.961)
N7: (178.663,-98.342,-115.737)
N9: (178.671,-97.458,-113.670)
O5': (173.810,-97.862,-112.345)
O3': (175.451,-95.401,-111.265)
Image (generated by PyMOL):
PyMOL image
show in jmol