ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5990:5960

Extra

PDB:
ATOM 1 O3' U A 989 159.796 -41.664 298.469 1.00 81.75 O
ATOM 2 P A A 990 158.488 -41.076 297.766 1.00 57.92 P
ATOM 3 OP1 A A 990 157.447 -42.155 297.769 1.00 58.17 O
ATOM 4 OP2 A A 990 158.932 -40.497 296.458 1.00 57.49 O
ATOM 5 O5' A A 990 158.056 -39.915 298.754 1.00 57.86 O
ATOM 6 C5' A A 990 157.580 -40.220 300.043 1.00 58.24 C
ATOM 7 C4' A A 990 157.636 -39.018 300.940 1.00 58.18 C
ATOM 8 O4' A A 990 158.981 -38.497 300.977 1.00 58.09 O
ATOM 9 C3' A A 990 156.829 -37.826 300.502 1.00 57.79 C
ATOM 10 O3' A A 990 155.469 -37.948 300.764 1.00 57.87 O
ATOM 11 C2' A A 990 157.467 -36.693 301.259 1.00 57.73 C
ATOM 12 O2' A A 990 157.001 -36.682 302.599 1.00 58.07 O
ATOM 13 C1' A A 990 158.937 -37.111 301.231 1.00 57.84 C
ATOM 14 N9 A A 990 159.667 -36.432 300.165 1.00 57.44 N
ATOM 15 C8 A A 990 159.977 -36.936 298.942 1.00 57.27 C
ATOM 16 N7 A A 990 160.630 -36.084 298.198 1.00 56.92 N
ATOM 17 C5 A A 990 160.739 -34.950 298.980 1.00 56.86 C
ATOM 18 C6 A A 990 161.334 -33.713 298.742 1.00 56.57 C
ATOM 19 N6 A A 990 161.944 -33.366 297.602 1.00 56.25 N
ATOM 20 N1 A A 990 161.271 -32.835 299.748 1.00 56.63 N
ATOM 21 C2 A A 990 160.648 -33.175 300.885 1.00 56.96 C
ATOM 22 N3 A A 990 160.040 -34.296 301.227 1.00 57.26 N
ATOM 23 C4 A A 990 160.138 -35.149 300.205 1.00 57.19 C
ATOM 24 P U A 991 154.476 -37.096 299.875 1.00 54.63 P
ATOM 25 OP1 U A 991 153.102 -37.626 300.099 1.00 54.81 O
ATOM 26 OP2 U A 991 155.024 -37.084 298.511 1.00 54.30 O
ATOM 27 O5' U A 991 154.621 -35.633 300.473 1.00 54.46 O
TER

ATOM 1 O3' A B 959 165.257 -22.478 297.378 1.00 51.60 O
ATOM 2 P G B 960 166.750 -23.051 297.122 1.00 57.14 P
ATOM 3 OP1 G B 960 167.510 -22.027 296.344 1.00 56.85 O
ATOM 4 OP2 G B 960 166.604 -24.414 296.550 1.00 57.22 O
ATOM 5 O5' G B 960 167.323 -23.164 298.600 1.00 57.54 O
ATOM 6 C5' G B 960 167.241 -24.381 299.318 1.00 57.90 C
ATOM 7 C4' G B 960 166.051 -24.384 300.221 1.00 58.05 C
ATOM 8 O4' G B 960 164.858 -24.607 299.428 1.00 57.84 O
ATOM 9 C3' G B 960 166.000 -25.491 301.259 1.00 58.49 C
ATOM 10 O3' G B 960 166.800 -25.233 302.408 1.00 58.78 O
ATOM 11 C2' G B 960 164.507 -25.585 301.541 1.00 58.51 C
ATOM 12 O2' G B 960 164.079 -24.452 302.281 1.00 58.50 O
ATOM 13 C1' G B 960 163.958 -25.437 300.130 1.00 58.11 C
ATOM 14 N9 G B 960 163.858 -26.720 299.405 1.00 58.14 N
ATOM 15 C8 G B 960 164.456 -26.948 298.179 1.00 57.91 C
ATOM 16 N7 G B 960 164.217 -28.124 297.648 1.00 57.98 N
ATOM 17 C5 G B 960 163.393 -28.706 298.589 1.00 58.27 C
ATOM 18 C6 G B 960 162.806 -29.986 298.565 1.00 58.48 C
ATOM 19 O6 G B 960 162.919 -30.859 297.719 1.00 58.45 O
ATOM 20 N1 G B 960 162.038 -30.232 299.685 1.00 58.77 N
ATOM 21 C2 G B 960 161.854 -29.342 300.705 1.00 58.85 C
ATOM 22 N2 G B 960 161.061 -29.815 301.681 1.00 59.16 N
ATOM 23 N3 G B 960 162.385 -28.112 300.746 1.00 58.66 N
ATOM 24 C4 G B 960 163.150 -27.864 299.670 1.00 58.37 C
ATOM 25 P A B 961 168.024 -26.231 302.800 1.00 64.02 P
ATOM 26 OP1 A B 961 168.720 -25.573 303.932 1.00 64.19 O
ATOM 27 OP2 A B 961 168.804 -26.537 301.570 1.00 64.46 O
ATOM 28 O5' A B 961 167.275 -27.549 303.298 1.00 63.70 O
TER

Atoms:
OP1: (157.447,-42.155,297.769)
OP2: (158.932,-40.497,296.458)
C3': (156.829,-37.826,300.502)
C1': (158.937,-37.111,301.231)
C5': (157.580,-40.220,300.043)
O4': (158.981,-38.497,300.977)
C8: (159.977,-36.936,298.942)
O2': (157.001,-36.682,302.599)
C6: (161.334,-33.713,298.742)
C5: (160.739,-34.950,298.980)
C4: (160.138,-35.149,300.205)
P: (158.488,-41.076,297.766)
C4': (157.636,-39.018,300.940)
C2': (157.467,-36.693,301.259)
C2: (160.648,-33.175,300.885)
N1: (161.271,-32.835,299.748)
N3: (160.040,-34.296,301.227)
N6: (161.944,-33.366,297.602)
N7: (160.630,-36.084,298.198)
N9: (159.667,-36.432,300.165)
O5': (158.056,-39.915,298.754)
O3': (155.469,-37.948,300.764)
OP1: (167.510,-22.027,296.344)
OP2: (166.604,-24.414,296.550)
C3': (166.000,-25.491,301.259)
C1': (163.958,-25.437,300.130)
C5': (167.241,-24.381,299.318)
O6: (162.919,-30.859,297.719)
O4': (164.858,-24.607,299.428)
C8: (164.456,-26.948,298.179)
C2: (161.854,-29.342,300.705)
C6: (162.806,-29.986,298.565)
C5: (163.393,-28.706,298.589)
C4: (163.150,-27.864,299.670)
P: (166.750,-23.051,297.122)
C4': (166.051,-24.384,300.221)
C2': (164.507,-25.585,301.541)
O2': (164.079,-24.452,302.281)
N1: (162.038,-30.232,299.685)
N2: (161.061,-29.815,301.681)
N3: (162.385,-28.112,300.746)
N7: (164.217,-28.124,297.648)
N9: (163.858,-26.720,299.405)
O5': (167.323,-23.164,298.600)
O3': (166.800,-25.233,302.408)
Image (generated by PyMOL):
PyMOL image
show in jmol