Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZFV:C11:D5
Extra
PDB:
ATOM 1 O3' C A 10 42.127 15.034 44.384 1.00 62.26 O
ATOM 2 P A A 11 42.660 13.523 44.353 1.00 62.57 P
ATOM 3 OP1 A A 11 44.100 13.551 44.691 1.00 60.39 O
ATOM 4 OP2 A A 11 42.209 12.932 43.067 1.00 65.38 O
ATOM 5 O5' A A 11 41.877 12.788 45.523 1.00 59.55 O
ATOM 6 C5' A A 11 42.030 13.199 46.874 1.00 59.72 C
ATOM 7 C4' A A 11 40.933 12.600 47.706 1.00 57.77 C
ATOM 8 O4' A A 11 39.663 13.061 47.188 1.00 60.60 O
ATOM 9 C3' A A 11 40.823 11.097 47.588 1.00 62.69 C
ATOM 10 O3' A A 11 41.740 10.428 48.418 1.00 68.07 O
ATOM 11 C2' A A 11 39.374 10.839 47.959 1.00 60.18 C
ATOM 12 O2' A A 11 39.129 10.903 49.346 1.00 63.37 O
ATOM 13 C1' A A 11 38.699 12.022 47.282 1.00 56.72 C
ATOM 14 N9 A A 11 38.250 11.685 45.935 1.00 52.98 N
ATOM 15 C8 A A 11 38.801 12.038 44.722 1.00 52.05 C
ATOM 16 N7 A A 11 38.108 11.620 43.687 1.00 48.54 N
ATOM 17 C5 A A 11 37.039 10.945 44.255 1.00 47.78 C
ATOM 18 C6 A A 11 35.929 10.298 43.696 1.00 46.95 C
ATOM 19 N6 A A 11 35.681 10.253 42.389 1.00 50.59 N
ATOM 20 N1 A A 11 35.058 9.702 44.538 1.00 48.84 N
ATOM 21 C2 A A 11 35.295 9.777 45.860 1.00 48.72 C
ATOM 22 N3 A A 11 36.291 10.378 46.507 1.00 47.26 N
ATOM 23 C4 A A 11 37.133 10.951 45.637 1.00 49.19 C
ATOM 24 P C A 12 42.354 9.041 47.923 1.00 69.68 P
ATOM 25 OP1 C A 12 43.344 8.650 48.946 1.00 66.47 O
ATOM 26 OP2 C A 12 42.781 9.232 46.509 1.00 62.86 O
ATOM 27 O5' C A 12 41.111 8.043 47.972 1.00 66.10 O
TER
ATOM 1 O3' G B 4 28.405 3.870 38.104 1.00 62.92 O
ATOM 2 P G B 5 27.304 4.999 38.398 1.00 68.71 P
ATOM 3 OP1 G B 5 26.014 4.527 37.844 1.00 68.34 O
ATOM 4 OP2 G B 5 27.861 6.293 37.929 1.00 69.53 O
ATOM 5 O5' G B 5 27.198 4.989 39.988 1.00 62.47 O
ATOM 6 C5' G B 5 27.140 3.755 40.694 1.00 64.30 C
ATOM 7 C4' G B 5 27.464 3.971 42.146 1.00 68.76 C
ATOM 8 O4' G B 5 28.768 4.571 42.266 1.00 71.85 O
ATOM 9 C3' G B 5 26.487 4.944 42.793 1.00 70.21 C
ATOM 10 O3' G B 5 26.242 4.467 44.110 1.00 72.59 O
ATOM 11 C2' G B 5 27.172 6.306 42.728 1.00 69.21 C
ATOM 12 O2' G B 5 26.945 7.131 43.849 1.00 72.75 O
ATOM 13 C1' G B 5 28.637 5.884 42.735 1.00 66.29 C
ATOM 14 N9 G B 5 29.631 6.716 42.092 1.00 59.44 N
ATOM 15 C8 G B 5 29.641 7.231 40.820 1.00 59.58 C
ATOM 16 N7 G B 5 30.706 7.945 40.573 1.00 59.65 N
ATOM 17 C5 G B 5 31.431 7.890 41.758 1.00 57.19 C
ATOM 18 C6 G B 5 32.671 8.485 42.114 1.00 57.18 C
ATOM 19 O6 G B 5 33.397 9.232 41.426 1.00 59.46 O
ATOM 20 N1 G B 5 33.040 8.151 43.419 1.00 55.42 N
ATOM 21 C2 G B 5 32.304 7.361 44.271 1.00 56.21 C
ATOM 22 N2 G B 5 32.819 7.139 45.482 1.00 59.65 N
ATOM 23 N3 G B 5 31.147 6.826 43.955 1.00 55.87 N
ATOM 24 C4 G B 5 30.778 7.128 42.697 1.00 57.03 C
ATOM 25 P U B 6 24.821 4.670 44.801 1.00 74.75 P
ATOM 26 OP1 U B 6 24.708 3.624 45.855 1.00 71.61 O
ATOM 27 OP2 U B 6 23.818 4.737 43.704 1.00 68.94 O
ATOM 28 O5' U B 6 24.941 6.069 45.552 1.00 77.14 O
TER
ATOM 2 P A A 11 42.660 13.523 44.353 1.00 62.57 P
ATOM 3 OP1 A A 11 44.100 13.551 44.691 1.00 60.39 O
ATOM 4 OP2 A A 11 42.209 12.932 43.067 1.00 65.38 O
ATOM 5 O5' A A 11 41.877 12.788 45.523 1.00 59.55 O
ATOM 6 C5' A A 11 42.030 13.199 46.874 1.00 59.72 C
ATOM 7 C4' A A 11 40.933 12.600 47.706 1.00 57.77 C
ATOM 8 O4' A A 11 39.663 13.061 47.188 1.00 60.60 O
ATOM 9 C3' A A 11 40.823 11.097 47.588 1.00 62.69 C
ATOM 10 O3' A A 11 41.740 10.428 48.418 1.00 68.07 O
ATOM 11 C2' A A 11 39.374 10.839 47.959 1.00 60.18 C
ATOM 12 O2' A A 11 39.129 10.903 49.346 1.00 63.37 O
ATOM 13 C1' A A 11 38.699 12.022 47.282 1.00 56.72 C
ATOM 14 N9 A A 11 38.250 11.685 45.935 1.00 52.98 N
ATOM 15 C8 A A 11 38.801 12.038 44.722 1.00 52.05 C
ATOM 16 N7 A A 11 38.108 11.620 43.687 1.00 48.54 N
ATOM 17 C5 A A 11 37.039 10.945 44.255 1.00 47.78 C
ATOM 18 C6 A A 11 35.929 10.298 43.696 1.00 46.95 C
ATOM 19 N6 A A 11 35.681 10.253 42.389 1.00 50.59 N
ATOM 20 N1 A A 11 35.058 9.702 44.538 1.00 48.84 N
ATOM 21 C2 A A 11 35.295 9.777 45.860 1.00 48.72 C
ATOM 22 N3 A A 11 36.291 10.378 46.507 1.00 47.26 N
ATOM 23 C4 A A 11 37.133 10.951 45.637 1.00 49.19 C
ATOM 24 P C A 12 42.354 9.041 47.923 1.00 69.68 P
ATOM 25 OP1 C A 12 43.344 8.650 48.946 1.00 66.47 O
ATOM 26 OP2 C A 12 42.781 9.232 46.509 1.00 62.86 O
ATOM 27 O5' C A 12 41.111 8.043 47.972 1.00 66.10 O
TER
ATOM 1 O3' G B 4 28.405 3.870 38.104 1.00 62.92 O
ATOM 2 P G B 5 27.304 4.999 38.398 1.00 68.71 P
ATOM 3 OP1 G B 5 26.014 4.527 37.844 1.00 68.34 O
ATOM 4 OP2 G B 5 27.861 6.293 37.929 1.00 69.53 O
ATOM 5 O5' G B 5 27.198 4.989 39.988 1.00 62.47 O
ATOM 6 C5' G B 5 27.140 3.755 40.694 1.00 64.30 C
ATOM 7 C4' G B 5 27.464 3.971 42.146 1.00 68.76 C
ATOM 8 O4' G B 5 28.768 4.571 42.266 1.00 71.85 O
ATOM 9 C3' G B 5 26.487 4.944 42.793 1.00 70.21 C
ATOM 10 O3' G B 5 26.242 4.467 44.110 1.00 72.59 O
ATOM 11 C2' G B 5 27.172 6.306 42.728 1.00 69.21 C
ATOM 12 O2' G B 5 26.945 7.131 43.849 1.00 72.75 O
ATOM 13 C1' G B 5 28.637 5.884 42.735 1.00 66.29 C
ATOM 14 N9 G B 5 29.631 6.716 42.092 1.00 59.44 N
ATOM 15 C8 G B 5 29.641 7.231 40.820 1.00 59.58 C
ATOM 16 N7 G B 5 30.706 7.945 40.573 1.00 59.65 N
ATOM 17 C5 G B 5 31.431 7.890 41.758 1.00 57.19 C
ATOM 18 C6 G B 5 32.671 8.485 42.114 1.00 57.18 C
ATOM 19 O6 G B 5 33.397 9.232 41.426 1.00 59.46 O
ATOM 20 N1 G B 5 33.040 8.151 43.419 1.00 55.42 N
ATOM 21 C2 G B 5 32.304 7.361 44.271 1.00 56.21 C
ATOM 22 N2 G B 5 32.819 7.139 45.482 1.00 59.65 N
ATOM 23 N3 G B 5 31.147 6.826 43.955 1.00 55.87 N
ATOM 24 C4 G B 5 30.778 7.128 42.697 1.00 57.03 C
ATOM 25 P U B 6 24.821 4.670 44.801 1.00 74.75 P
ATOM 26 OP1 U B 6 24.708 3.624 45.855 1.00 71.61 O
ATOM 27 OP2 U B 6 23.818 4.737 43.704 1.00 68.94 O
ATOM 28 O5' U B 6 24.941 6.069 45.552 1.00 77.14 O
TER
Atoms:
OP1: (44.100,13.551,44.691)
OP2: (42.209,12.932,43.067)
C3': (40.823,11.097,47.588)
C1': (38.699,12.022,47.282)
C5': (42.030,13.199,46.874)
O4': (39.663,13.061,47.188)
C8: (38.801,12.038,44.722)
O2': (39.129,10.903,49.346)
C6: (35.929,10.298,43.696)
C5: (37.039,10.945,44.255)
C4: (37.133,10.951,45.637)
P: (42.660,13.523,44.353)
C4': (40.933,12.600,47.706)
C2': (39.374,10.839,47.959)
C2: (35.295,9.777,45.860)
N1: (35.058,9.702,44.538)
N3: (36.291,10.378,46.507)
N6: (35.681,10.253,42.389)
N7: (38.108,11.620,43.687)
N9: (38.250,11.685,45.935)
O5': (41.877,12.788,45.523)
O3': (41.740,10.428,48.418)
OP2: (42.209,12.932,43.067)
C3': (40.823,11.097,47.588)
C1': (38.699,12.022,47.282)
C5': (42.030,13.199,46.874)
O4': (39.663,13.061,47.188)
C8: (38.801,12.038,44.722)
O2': (39.129,10.903,49.346)
C6: (35.929,10.298,43.696)
C5: (37.039,10.945,44.255)
C4: (37.133,10.951,45.637)
P: (42.660,13.523,44.353)
C4': (40.933,12.600,47.706)
C2': (39.374,10.839,47.959)
C2: (35.295,9.777,45.860)
N1: (35.058,9.702,44.538)
N3: (36.291,10.378,46.507)
N6: (35.681,10.253,42.389)
N7: (38.108,11.620,43.687)
N9: (38.250,11.685,45.935)
O5': (41.877,12.788,45.523)
O3': (41.740,10.428,48.418)
OP1: (26.014,4.527,37.844)
OP2: (27.861,6.293,37.929)
C3': (26.487,4.944,42.793)
C1': (28.637,5.884,42.735)
C5': (27.140,3.755,40.694)
O6: (33.397,9.232,41.426)
O4': (28.768,4.571,42.266)
C8: (29.641,7.231,40.820)
C2: (32.304,7.361,44.271)
C6: (32.671,8.485,42.114)
C5: (31.431,7.890,41.758)
C4: (30.778,7.128,42.697)
P: (27.304,4.999,38.398)
C4': (27.464,3.971,42.146)
C2': (27.172,6.306,42.728)
O2': (26.945,7.131,43.849)
N1: (33.040,8.151,43.419)
N2: (32.819,7.139,45.482)
N3: (31.147,6.826,43.955)
N7: (30.706,7.945,40.573)
N9: (29.631,6.716,42.092)
O5': (27.198,4.989,39.988)
O3': (26.242,4.467,44.110)
OP2: (27.861,6.293,37.929)
C3': (26.487,4.944,42.793)
C1': (28.637,5.884,42.735)
C5': (27.140,3.755,40.694)
O6: (33.397,9.232,41.426)
O4': (28.768,4.571,42.266)
C8: (29.641,7.231,40.820)
C2: (32.304,7.361,44.271)
C6: (32.671,8.485,42.114)
C5: (31.431,7.890,41.758)
C4: (30.778,7.128,42.697)
P: (27.304,4.999,38.398)
C4': (27.464,3.971,42.146)
C2': (27.172,6.306,42.728)
O2': (26.945,7.131,43.849)
N1: (33.040,8.151,43.419)
N2: (32.819,7.139,45.482)
N3: (31.147,6.826,43.955)
N7: (30.706,7.945,40.573)
N9: (29.631,6.716,42.092)
O5': (27.198,4.989,39.988)
O3': (26.242,4.467,44.110)
Image (generated by PyMOL):