Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A661:A740
Extra
PDB:
ATOM 1 O3' U A 660 -46.721 54.485 10.953 1.00 26.01 O
ATOM 2 P A A 661 -46.921 53.330 12.024 1.00 28.45 P
ATOM 3 OP1 A A 661 -47.269 53.969 13.314 1.00 28.45 O
ATOM 4 OP2 A A 661 -45.720 52.465 11.956 1.00 28.45 O
ATOM 5 O5' A A 661 -48.177 52.562 11.453 1.00 28.45 O
ATOM 6 C5' A A 661 -49.354 53.265 11.112 1.00 28.45 C
ATOM 7 C4' A A 661 -50.181 52.479 10.142 1.00 28.45 C
ATOM 8 O4' A A 661 -49.535 52.462 8.834 1.00 28.45 O
ATOM 9 C3' A A 661 -50.345 51.010 10.474 1.00 28.45 C
ATOM 10 O3' A A 661 -51.296 50.771 11.506 1.00 28.45 O
ATOM 11 C2' A A 661 -50.710 50.418 9.115 1.00 28.45 C
ATOM 12 O2' A A 661 -52.059 50.699 8.781 1.00 28.45 O
ATOM 13 C1' A A 661 -49.807 51.233 8.185 1.00 28.45 C
ATOM 14 N9 A A 661 -48.535 50.546 7.913 1.00 27.46 N
ATOM 15 C8 A A 661 -47.363 50.637 8.609 1.00 27.46 C
ATOM 16 N7 A A 661 -46.419 49.875 8.108 1.00 27.46 N
ATOM 17 C5 A A 661 -47.005 49.236 7.020 1.00 27.46 C
ATOM 18 C6 A A 661 -46.531 48.303 6.076 1.00 27.46 C
ATOM 19 N6 A A 661 -45.303 47.813 6.047 1.00 27.46 N
ATOM 20 N1 A A 661 -47.365 47.867 5.130 1.00 27.46 N
ATOM 21 C2 A A 661 -48.603 48.366 5.148 1.00 27.46 C
ATOM 22 N3 A A 661 -49.174 49.247 5.969 1.00 27.46 N
ATOM 23 C4 A A 661 -48.310 49.650 6.899 1.00 27.46 C
ATOM 24 P G A 662 -51.314 49.357 12.281 1.00 4.76 P
ATOM 25 OP1 G A 662 -52.490 49.356 13.207 1.00 4.76 O
ATOM 26 OP2 G A 662 -49.953 49.135 12.835 1.00 4.76 O
ATOM 27 O5' G A 662 -51.569 48.362 11.103 1.00 4.76 O
TER
ATOM 1 O3' G B 739 -40.769 39.247 -0.611 1.00 11.21 O
ATOM 2 P G B 740 -40.537 40.802 -0.955 1.00 16.68 P
ATOM 3 OP1 G B 740 -39.853 40.856 -2.286 1.00 16.68 O
ATOM 4 OP2 G B 740 -39.869 41.417 0.229 1.00 16.68 O
ATOM 5 O5' G B 740 -42.027 41.354 -1.091 1.00 16.68 O
ATOM 6 C5' G B 740 -42.775 41.121 -2.272 1.00 16.68 C
ATOM 7 C4' G B 740 -44.188 41.582 -2.115 1.00 16.68 C
ATOM 8 O4' G B 740 -44.636 41.298 -0.772 1.00 16.68 O
ATOM 9 C3' G B 740 -44.407 43.071 -2.252 1.00 16.68 C
ATOM 10 O3' G B 740 -44.447 43.506 -3.593 1.00 16.68 O
ATOM 11 C2' G B 740 -45.703 43.299 -1.481 1.00 16.68 C
ATOM 12 O2' G B 740 -46.852 42.947 -2.254 1.00 16.68 O
ATOM 13 C1' G B 740 -45.542 42.297 -0.345 1.00 16.68 C
ATOM 14 N9 G B 740 -44.999 42.929 0.858 1.00 16.47 N
ATOM 15 C8 G B 740 -43.777 42.725 1.430 1.00 16.47 C
ATOM 16 N7 G B 740 -43.600 43.437 2.512 1.00 16.47 N
ATOM 17 C5 G B 740 -44.777 44.148 2.625 1.00 16.47 C
ATOM 18 C6 G B 740 -45.157 45.073 3.600 1.00 16.47 C
ATOM 19 O6 G B 740 -44.467 45.432 4.562 1.00 16.47 O
ATOM 20 N1 G B 740 -46.442 45.558 3.369 1.00 16.47 N
ATOM 21 C2 G B 740 -47.229 45.171 2.320 1.00 16.47 C
ATOM 22 N2 G B 740 -48.430 45.726 2.248 1.00 16.47 N
ATOM 23 N3 G B 740 -46.893 44.305 1.398 1.00 16.47 N
ATOM 24 C4 G B 740 -45.656 43.844 1.622 1.00 16.47 C
ATOM 25 P A B 741 -43.871 44.947 -3.954 1.00 18.04 P
ATOM 26 OP1 A B 741 -43.905 45.075 -5.435 1.00 18.04 O
ATOM 27 OP2 A B 741 -42.563 45.070 -3.252 1.00 18.04 O
ATOM 28 O5' A B 741 -44.956 45.919 -3.294 1.00 18.04 O
TER
ATOM 2 P A A 661 -46.921 53.330 12.024 1.00 28.45 P
ATOM 3 OP1 A A 661 -47.269 53.969 13.314 1.00 28.45 O
ATOM 4 OP2 A A 661 -45.720 52.465 11.956 1.00 28.45 O
ATOM 5 O5' A A 661 -48.177 52.562 11.453 1.00 28.45 O
ATOM 6 C5' A A 661 -49.354 53.265 11.112 1.00 28.45 C
ATOM 7 C4' A A 661 -50.181 52.479 10.142 1.00 28.45 C
ATOM 8 O4' A A 661 -49.535 52.462 8.834 1.00 28.45 O
ATOM 9 C3' A A 661 -50.345 51.010 10.474 1.00 28.45 C
ATOM 10 O3' A A 661 -51.296 50.771 11.506 1.00 28.45 O
ATOM 11 C2' A A 661 -50.710 50.418 9.115 1.00 28.45 C
ATOM 12 O2' A A 661 -52.059 50.699 8.781 1.00 28.45 O
ATOM 13 C1' A A 661 -49.807 51.233 8.185 1.00 28.45 C
ATOM 14 N9 A A 661 -48.535 50.546 7.913 1.00 27.46 N
ATOM 15 C8 A A 661 -47.363 50.637 8.609 1.00 27.46 C
ATOM 16 N7 A A 661 -46.419 49.875 8.108 1.00 27.46 N
ATOM 17 C5 A A 661 -47.005 49.236 7.020 1.00 27.46 C
ATOM 18 C6 A A 661 -46.531 48.303 6.076 1.00 27.46 C
ATOM 19 N6 A A 661 -45.303 47.813 6.047 1.00 27.46 N
ATOM 20 N1 A A 661 -47.365 47.867 5.130 1.00 27.46 N
ATOM 21 C2 A A 661 -48.603 48.366 5.148 1.00 27.46 C
ATOM 22 N3 A A 661 -49.174 49.247 5.969 1.00 27.46 N
ATOM 23 C4 A A 661 -48.310 49.650 6.899 1.00 27.46 C
ATOM 24 P G A 662 -51.314 49.357 12.281 1.00 4.76 P
ATOM 25 OP1 G A 662 -52.490 49.356 13.207 1.00 4.76 O
ATOM 26 OP2 G A 662 -49.953 49.135 12.835 1.00 4.76 O
ATOM 27 O5' G A 662 -51.569 48.362 11.103 1.00 4.76 O
TER
ATOM 1 O3' G B 739 -40.769 39.247 -0.611 1.00 11.21 O
ATOM 2 P G B 740 -40.537 40.802 -0.955 1.00 16.68 P
ATOM 3 OP1 G B 740 -39.853 40.856 -2.286 1.00 16.68 O
ATOM 4 OP2 G B 740 -39.869 41.417 0.229 1.00 16.68 O
ATOM 5 O5' G B 740 -42.027 41.354 -1.091 1.00 16.68 O
ATOM 6 C5' G B 740 -42.775 41.121 -2.272 1.00 16.68 C
ATOM 7 C4' G B 740 -44.188 41.582 -2.115 1.00 16.68 C
ATOM 8 O4' G B 740 -44.636 41.298 -0.772 1.00 16.68 O
ATOM 9 C3' G B 740 -44.407 43.071 -2.252 1.00 16.68 C
ATOM 10 O3' G B 740 -44.447 43.506 -3.593 1.00 16.68 O
ATOM 11 C2' G B 740 -45.703 43.299 -1.481 1.00 16.68 C
ATOM 12 O2' G B 740 -46.852 42.947 -2.254 1.00 16.68 O
ATOM 13 C1' G B 740 -45.542 42.297 -0.345 1.00 16.68 C
ATOM 14 N9 G B 740 -44.999 42.929 0.858 1.00 16.47 N
ATOM 15 C8 G B 740 -43.777 42.725 1.430 1.00 16.47 C
ATOM 16 N7 G B 740 -43.600 43.437 2.512 1.00 16.47 N
ATOM 17 C5 G B 740 -44.777 44.148 2.625 1.00 16.47 C
ATOM 18 C6 G B 740 -45.157 45.073 3.600 1.00 16.47 C
ATOM 19 O6 G B 740 -44.467 45.432 4.562 1.00 16.47 O
ATOM 20 N1 G B 740 -46.442 45.558 3.369 1.00 16.47 N
ATOM 21 C2 G B 740 -47.229 45.171 2.320 1.00 16.47 C
ATOM 22 N2 G B 740 -48.430 45.726 2.248 1.00 16.47 N
ATOM 23 N3 G B 740 -46.893 44.305 1.398 1.00 16.47 N
ATOM 24 C4 G B 740 -45.656 43.844 1.622 1.00 16.47 C
ATOM 25 P A B 741 -43.871 44.947 -3.954 1.00 18.04 P
ATOM 26 OP1 A B 741 -43.905 45.075 -5.435 1.00 18.04 O
ATOM 27 OP2 A B 741 -42.563 45.070 -3.252 1.00 18.04 O
ATOM 28 O5' A B 741 -44.956 45.919 -3.294 1.00 18.04 O
TER
Atoms:
OP1: (-47.269,53.969,13.314)
OP2: (-45.720,52.465,11.956)
C3': (-50.345,51.010,10.474)
C1': (-49.807,51.233,8.185)
C5': (-49.354,53.265,11.112)
O4': (-49.535,52.462,8.834)
C8: (-47.363,50.637,8.609)
O2': (-52.059,50.699,8.781)
C6: (-46.531,48.303,6.076)
C5: (-47.005,49.236,7.020)
C4: (-48.310,49.650,6.899)
P: (-46.921,53.330,12.024)
C4': (-50.181,52.479,10.142)
C2': (-50.710,50.418,9.115)
C2: (-48.603,48.366,5.148)
N1: (-47.365,47.867,5.130)
N3: (-49.174,49.247,5.969)
N6: (-45.303,47.813,6.047)
N7: (-46.419,49.875,8.108)
N9: (-48.535,50.546,7.913)
O5': (-48.177,52.562,11.453)
O3': (-51.296,50.771,11.506)
OP2: (-45.720,52.465,11.956)
C3': (-50.345,51.010,10.474)
C1': (-49.807,51.233,8.185)
C5': (-49.354,53.265,11.112)
O4': (-49.535,52.462,8.834)
C8: (-47.363,50.637,8.609)
O2': (-52.059,50.699,8.781)
C6: (-46.531,48.303,6.076)
C5: (-47.005,49.236,7.020)
C4: (-48.310,49.650,6.899)
P: (-46.921,53.330,12.024)
C4': (-50.181,52.479,10.142)
C2': (-50.710,50.418,9.115)
C2: (-48.603,48.366,5.148)
N1: (-47.365,47.867,5.130)
N3: (-49.174,49.247,5.969)
N6: (-45.303,47.813,6.047)
N7: (-46.419,49.875,8.108)
N9: (-48.535,50.546,7.913)
O5': (-48.177,52.562,11.453)
O3': (-51.296,50.771,11.506)
OP1: (-39.853,40.856,-2.286)
OP2: (-39.869,41.417,0.229)
C3': (-44.407,43.071,-2.252)
C1': (-45.542,42.297,-0.345)
C5': (-42.775,41.121,-2.272)
O6: (-44.467,45.432,4.562)
O4': (-44.636,41.298,-0.772)
C8: (-43.777,42.725,1.430)
C2: (-47.229,45.171,2.320)
C6: (-45.157,45.073,3.600)
C5: (-44.777,44.148,2.625)
C4: (-45.656,43.844,1.622)
P: (-40.537,40.802,-0.955)
C4': (-44.188,41.582,-2.115)
C2': (-45.703,43.299,-1.481)
O2': (-46.852,42.947,-2.254)
N1: (-46.442,45.558,3.369)
N2: (-48.430,45.726,2.248)
N3: (-46.893,44.305,1.398)
N7: (-43.600,43.437,2.512)
N9: (-44.999,42.929,0.858)
O5': (-42.027,41.354,-1.091)
O3': (-44.447,43.506,-3.593)
OP2: (-39.869,41.417,0.229)
C3': (-44.407,43.071,-2.252)
C1': (-45.542,42.297,-0.345)
C5': (-42.775,41.121,-2.272)
O6: (-44.467,45.432,4.562)
O4': (-44.636,41.298,-0.772)
C8: (-43.777,42.725,1.430)
C2: (-47.229,45.171,2.320)
C6: (-45.157,45.073,3.600)
C5: (-44.777,44.148,2.625)
C4: (-45.656,43.844,1.622)
P: (-40.537,40.802,-0.955)
C4': (-44.188,41.582,-2.115)
C2': (-45.703,43.299,-1.481)
O2': (-46.852,42.947,-2.254)
N1: (-46.442,45.558,3.369)
N2: (-48.430,45.726,2.248)
N3: (-46.893,44.305,1.398)
N7: (-43.600,43.437,2.512)
N9: (-44.999,42.929,0.858)
O5': (-42.027,41.354,-1.091)
O3': (-44.447,43.506,-3.593)
Image (generated by PyMOL):