Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:432:1327
Extra
PDB:
ATOM 1 O3' C A 31 75.432 -19.377 122.989 1.00 58.96 O
ATOM 2 P A A 32 74.417 -20.389 123.689 1.00 53.87 P
ATOM 3 OP1 A A 32 75.020 -20.748 125.034 1.00 54.63 O
ATOM 4 OP2 A A 32 74.148 -21.480 122.713 1.00 53.47 O
ATOM 5 O5' A A 32 73.113 -19.460 123.903 1.00 53.56 O
ATOM 6 C5' A A 32 73.174 -18.292 124.738 1.00 53.88 C
ATOM 7 C4' A A 32 71.855 -17.560 124.816 1.00 53.55 C
ATOM 8 O4' A A 32 71.462 -17.160 123.486 1.00 52.87 O
ATOM 9 C3' A A 32 70.687 -18.370 125.377 1.00 53.55 C
ATOM 10 O3' A A 32 69.732 -17.498 125.962 1.00 53.55 O
ATOM 11 C2' A A 32 70.039 -18.930 124.130 1.00 52.88 C
ATOM 12 O2' A A 32 68.660 -19.194 124.304 1.00 52.66 O
ATOM 13 C1' A A 32 70.237 -17.784 123.146 1.00 52.46 C
ATOM 14 N9 A A 32 70.281 -18.190 121.736 1.00 51.90 N
ATOM 15 C8 A A 32 71.050 -19.099 121.024 1.00 51.85 C
ATOM 16 N7 A A 32 70.773 -19.139 119.727 1.00 51.28 N
ATOM 17 C5 A A 32 69.766 -18.184 119.589 1.00 50.93 C
ATOM 18 C6 A A 32 69.033 -17.693 118.503 1.00 50.33 C
ATOM 19 N6 A A 32 69.173 -18.115 117.255 1.00 49.92 N
ATOM 20 N1 A A 32 68.114 -16.744 118.718 1.00 50.16 N
ATOM 21 C2 A A 32 67.949 -16.289 119.951 1.00 50.59 C
ATOM 22 N3 A A 32 68.550 -16.653 121.065 1.00 51.18 N
ATOM 23 C4 A A 32 69.458 -17.608 120.807 1.00 51.31 C
ATOM 24 P U A 33 69.808 -17.048 127.476 1.00 54.09 P
ATOM 25 OP1 U A 33 71.225 -16.939 127.836 1.00 54.59 O
ATOM 26 OP2 U A 33 68.958 -17.935 128.262 1.00 54.29 O
ATOM 27 O5' U A 33 69.164 -15.623 127.386 1.00 53.88 O
TER
ATOM 1 O3' U B 326 64.380 -13.317 107.326 1.00 63.42 O
ATOM 2 P G B 327 65.449 -12.865 108.430 1.00 58.77 P
ATOM 3 OP1 G B 327 65.827 -11.488 108.096 1.00 58.71 O
ATOM 4 OP2 G B 327 66.516 -13.904 108.482 1.00 58.96 O
ATOM 5 O5' G B 327 64.604 -12.875 109.781 1.00 59.05 O
ATOM 6 C5' G B 327 63.626 -11.885 110.020 1.00 58.98 C
ATOM 7 C4' G B 327 63.310 -11.751 111.478 1.00 59.37 C
ATOM 8 O4' G B 327 63.017 -13.053 112.038 1.00 59.53 O
ATOM 9 C3' G B 327 64.429 -11.247 112.352 1.00 59.79 C
ATOM 10 O3' G B 327 64.626 -9.860 112.246 1.00 59.78 O
ATOM 11 C2' G B 327 63.989 -11.706 113.738 1.00 60.17 C
ATOM 12 O2' G B 327 62.957 -10.861 114.250 1.00 60.19 O
ATOM 13 C1' G B 327 63.389 -13.077 113.405 1.00 60.00 C
ATOM 14 N9 G B 327 64.355 -14.164 113.589 1.00 60.22 N
ATOM 15 C8 G B 327 64.853 -14.937 112.583 1.00 59.99 C
ATOM 16 N7 G B 327 65.689 -15.826 113.026 1.00 60.28 N
ATOM 17 C5 G B 327 65.754 -15.624 114.398 1.00 60.72 C
ATOM 18 C6 G B 327 66.500 -16.283 115.411 1.00 61.18 C
ATOM 19 O6 G B 327 67.294 -17.238 115.321 1.00 61.31 O
ATOM 20 N1 G B 327 66.252 -15.747 116.661 1.00 61.55 N
ATOM 21 C2 G B 327 65.412 -14.709 116.909 1.00 61.47 C
ATOM 22 N2 G B 327 65.307 -14.329 118.188 1.00 61.89 N
ATOM 23 N3 G B 327 64.703 -14.097 115.975 1.00 61.04 N
ATOM 24 C4 G B 327 64.921 -14.602 114.754 1.00 60.68 C
ATOM 25 P G B 328 66.107 -9.277 112.367 1.00 52.25 P
ATOM 26 OP1 G B 328 66.036 -7.810 112.141 1.00 52.18 O
ATOM 27 OP2 G B 328 66.948 -10.090 111.479 1.00 52.09 O
ATOM 28 O5' G B 328 66.459 -9.581 113.881 1.00 52.78 O
TER
ATOM 2 P A A 32 74.417 -20.389 123.689 1.00 53.87 P
ATOM 3 OP1 A A 32 75.020 -20.748 125.034 1.00 54.63 O
ATOM 4 OP2 A A 32 74.148 -21.480 122.713 1.00 53.47 O
ATOM 5 O5' A A 32 73.113 -19.460 123.903 1.00 53.56 O
ATOM 6 C5' A A 32 73.174 -18.292 124.738 1.00 53.88 C
ATOM 7 C4' A A 32 71.855 -17.560 124.816 1.00 53.55 C
ATOM 8 O4' A A 32 71.462 -17.160 123.486 1.00 52.87 O
ATOM 9 C3' A A 32 70.687 -18.370 125.377 1.00 53.55 C
ATOM 10 O3' A A 32 69.732 -17.498 125.962 1.00 53.55 O
ATOM 11 C2' A A 32 70.039 -18.930 124.130 1.00 52.88 C
ATOM 12 O2' A A 32 68.660 -19.194 124.304 1.00 52.66 O
ATOM 13 C1' A A 32 70.237 -17.784 123.146 1.00 52.46 C
ATOM 14 N9 A A 32 70.281 -18.190 121.736 1.00 51.90 N
ATOM 15 C8 A A 32 71.050 -19.099 121.024 1.00 51.85 C
ATOM 16 N7 A A 32 70.773 -19.139 119.727 1.00 51.28 N
ATOM 17 C5 A A 32 69.766 -18.184 119.589 1.00 50.93 C
ATOM 18 C6 A A 32 69.033 -17.693 118.503 1.00 50.33 C
ATOM 19 N6 A A 32 69.173 -18.115 117.255 1.00 49.92 N
ATOM 20 N1 A A 32 68.114 -16.744 118.718 1.00 50.16 N
ATOM 21 C2 A A 32 67.949 -16.289 119.951 1.00 50.59 C
ATOM 22 N3 A A 32 68.550 -16.653 121.065 1.00 51.18 N
ATOM 23 C4 A A 32 69.458 -17.608 120.807 1.00 51.31 C
ATOM 24 P U A 33 69.808 -17.048 127.476 1.00 54.09 P
ATOM 25 OP1 U A 33 71.225 -16.939 127.836 1.00 54.59 O
ATOM 26 OP2 U A 33 68.958 -17.935 128.262 1.00 54.29 O
ATOM 27 O5' U A 33 69.164 -15.623 127.386 1.00 53.88 O
TER
ATOM 1 O3' U B 326 64.380 -13.317 107.326 1.00 63.42 O
ATOM 2 P G B 327 65.449 -12.865 108.430 1.00 58.77 P
ATOM 3 OP1 G B 327 65.827 -11.488 108.096 1.00 58.71 O
ATOM 4 OP2 G B 327 66.516 -13.904 108.482 1.00 58.96 O
ATOM 5 O5' G B 327 64.604 -12.875 109.781 1.00 59.05 O
ATOM 6 C5' G B 327 63.626 -11.885 110.020 1.00 58.98 C
ATOM 7 C4' G B 327 63.310 -11.751 111.478 1.00 59.37 C
ATOM 8 O4' G B 327 63.017 -13.053 112.038 1.00 59.53 O
ATOM 9 C3' G B 327 64.429 -11.247 112.352 1.00 59.79 C
ATOM 10 O3' G B 327 64.626 -9.860 112.246 1.00 59.78 O
ATOM 11 C2' G B 327 63.989 -11.706 113.738 1.00 60.17 C
ATOM 12 O2' G B 327 62.957 -10.861 114.250 1.00 60.19 O
ATOM 13 C1' G B 327 63.389 -13.077 113.405 1.00 60.00 C
ATOM 14 N9 G B 327 64.355 -14.164 113.589 1.00 60.22 N
ATOM 15 C8 G B 327 64.853 -14.937 112.583 1.00 59.99 C
ATOM 16 N7 G B 327 65.689 -15.826 113.026 1.00 60.28 N
ATOM 17 C5 G B 327 65.754 -15.624 114.398 1.00 60.72 C
ATOM 18 C6 G B 327 66.500 -16.283 115.411 1.00 61.18 C
ATOM 19 O6 G B 327 67.294 -17.238 115.321 1.00 61.31 O
ATOM 20 N1 G B 327 66.252 -15.747 116.661 1.00 61.55 N
ATOM 21 C2 G B 327 65.412 -14.709 116.909 1.00 61.47 C
ATOM 22 N2 G B 327 65.307 -14.329 118.188 1.00 61.89 N
ATOM 23 N3 G B 327 64.703 -14.097 115.975 1.00 61.04 N
ATOM 24 C4 G B 327 64.921 -14.602 114.754 1.00 60.68 C
ATOM 25 P G B 328 66.107 -9.277 112.367 1.00 52.25 P
ATOM 26 OP1 G B 328 66.036 -7.810 112.141 1.00 52.18 O
ATOM 27 OP2 G B 328 66.948 -10.090 111.479 1.00 52.09 O
ATOM 28 O5' G B 328 66.459 -9.581 113.881 1.00 52.78 O
TER
Atoms:
OP1: (75.020,-20.748,125.034)
OP2: (74.148,-21.480,122.713)
C3': (70.687,-18.370,125.377)
C1': (70.237,-17.784,123.146)
C5': (73.174,-18.292,124.738)
O4': (71.462,-17.160,123.486)
C8: (71.050,-19.099,121.024)
O2': (68.660,-19.194,124.304)
C6: (69.033,-17.693,118.503)
C5: (69.766,-18.184,119.589)
C4: (69.458,-17.608,120.807)
P: (74.417,-20.389,123.689)
C4': (71.855,-17.560,124.816)
C2': (70.039,-18.930,124.130)
C2: (67.949,-16.289,119.951)
N1: (68.114,-16.744,118.718)
N3: (68.550,-16.653,121.065)
N6: (69.173,-18.115,117.255)
N7: (70.773,-19.139,119.727)
N9: (70.281,-18.190,121.736)
O5': (73.113,-19.460,123.903)
O3': (69.732,-17.498,125.962)
OP2: (74.148,-21.480,122.713)
C3': (70.687,-18.370,125.377)
C1': (70.237,-17.784,123.146)
C5': (73.174,-18.292,124.738)
O4': (71.462,-17.160,123.486)
C8: (71.050,-19.099,121.024)
O2': (68.660,-19.194,124.304)
C6: (69.033,-17.693,118.503)
C5: (69.766,-18.184,119.589)
C4: (69.458,-17.608,120.807)
P: (74.417,-20.389,123.689)
C4': (71.855,-17.560,124.816)
C2': (70.039,-18.930,124.130)
C2: (67.949,-16.289,119.951)
N1: (68.114,-16.744,118.718)
N3: (68.550,-16.653,121.065)
N6: (69.173,-18.115,117.255)
N7: (70.773,-19.139,119.727)
N9: (70.281,-18.190,121.736)
O5': (73.113,-19.460,123.903)
O3': (69.732,-17.498,125.962)
OP1: (65.827,-11.488,108.096)
OP2: (66.516,-13.904,108.482)
C3': (64.429,-11.247,112.352)
C1': (63.389,-13.077,113.405)
C5': (63.626,-11.885,110.020)
O6: (67.294,-17.238,115.321)
O4': (63.017,-13.053,112.038)
C8: (64.853,-14.937,112.583)
C2: (65.412,-14.709,116.909)
C6: (66.500,-16.283,115.411)
C5: (65.754,-15.624,114.398)
C4: (64.921,-14.602,114.754)
P: (65.449,-12.865,108.430)
C4': (63.310,-11.751,111.478)
C2': (63.989,-11.706,113.738)
O2': (62.957,-10.861,114.250)
N1: (66.252,-15.747,116.661)
N2: (65.307,-14.329,118.188)
N3: (64.703,-14.097,115.975)
N7: (65.689,-15.826,113.026)
N9: (64.355,-14.164,113.589)
O5': (64.604,-12.875,109.781)
O3': (64.626,-9.860,112.246)
OP2: (66.516,-13.904,108.482)
C3': (64.429,-11.247,112.352)
C1': (63.389,-13.077,113.405)
C5': (63.626,-11.885,110.020)
O6: (67.294,-17.238,115.321)
O4': (63.017,-13.053,112.038)
C8: (64.853,-14.937,112.583)
C2: (65.412,-14.709,116.909)
C6: (66.500,-16.283,115.411)
C5: (65.754,-15.624,114.398)
C4: (64.921,-14.602,114.754)
P: (65.449,-12.865,108.430)
C4': (63.310,-11.751,111.478)
C2': (63.989,-11.706,113.738)
O2': (62.957,-10.861,114.250)
N1: (66.252,-15.747,116.661)
N2: (65.307,-14.329,118.188)
N3: (64.703,-14.097,115.975)
N7: (65.689,-15.826,113.026)
N9: (64.355,-14.164,113.589)
O5': (64.604,-12.875,109.781)
O3': (64.626,-9.860,112.246)
Image (generated by PyMOL):