Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A305:A100
Extra
PDB:
ATOM 1 O3' C A 304 -1.494 53.703 116.777 1.00 13.66 O
ATOM 2 P A A 305 -1.050 52.682 117.951 1.00 64.43 P
ATOM 3 OP1 A A 305 -0.901 53.467 119.202 1.00 41.52 O
ATOM 4 OP2 A A 305 0.090 51.860 117.457 1.00 37.25 O
ATOM 5 O5' A A 305 -2.323 51.757 118.183 1.00 12.60 O
ATOM 6 C5' A A 305 -3.601 52.355 118.441 1.00 14.43 C
ATOM 7 C4' A A 305 -4.665 51.299 118.607 1.00 17.33 C
ATOM 8 O4' A A 305 -4.699 50.478 117.414 1.00 18.08 O
ATOM 9 C3' A A 305 -4.501 50.347 119.785 1.00 19.70 C
ATOM 10 O3' A A 305 -5.818 50.035 120.261 1.00 22.47 O
ATOM 11 C2' A A 305 -3.870 49.119 119.137 1.00 19.48 C
ATOM 12 O2' A A 305 -4.148 47.911 119.811 1.00 21.70 O
ATOM 13 C1' A A 305 -4.544 49.121 117.768 1.00 18.03 C
ATOM 14 N9 A A 305 -3.801 48.445 116.703 1.00 8.71 N
ATOM 15 C8 A A 305 -2.522 48.673 116.253 1.00 7.23 C
ATOM 16 N7 A A 305 -2.172 47.911 115.249 1.00 5.99 N
ATOM 17 C5 A A 305 -3.291 47.127 115.029 1.00 5.96 C
ATOM 18 C6 A A 305 -3.554 46.132 114.107 1.00 5.52 C
ATOM 19 N6 A A 305 -2.679 45.745 113.194 1.00 3.24 N
ATOM 20 N1 A A 305 -4.758 45.537 114.144 1.00 6.36 N
ATOM 21 C2 A A 305 -5.637 45.935 115.063 1.00 8.21 C
ATOM 22 N3 A A 305 -5.509 46.868 115.994 1.00 8.91 N
ATOM 23 C4 A A 305 -4.293 47.435 115.922 1.00 7.73 C
ATOM 24 P G A 306 -6.055 49.583 121.795 1.00 38.31 P
ATOM 25 OP1 G A 306 -4.764 49.665 122.542 1.00 38.43 O
ATOM 26 OP2 G A 306 -6.817 48.309 121.780 1.00 42.21 O
ATOM 27 O5' G A 306 -7.042 50.692 122.368 1.00 19.14 O
TER
ATOM 1 O3' G B 99 -3.563 37.326 105.449 1.00 14.97 O
ATOM 2 P G B 100 -4.505 38.560 105.101 1.00 10.50 P
ATOM 3 OP1 G B 100 -5.403 38.126 104.010 1.00 43.71 O
ATOM 4 OP2 G B 100 -3.625 39.741 104.918 1.00 46.89 O
ATOM 5 O5' G B 100 -5.381 38.750 106.411 1.00 16.24 O
ATOM 6 C5' G B 100 -6.415 37.819 106.703 1.00 15.99 C
ATOM 7 C4' G B 100 -7.160 38.218 107.950 1.00 15.20 C
ATOM 8 O4' G B 100 -6.290 38.102 109.104 1.00 14.71 O
ATOM 9 C3' G B 100 -7.718 39.630 108.047 1.00 15.38 C
ATOM 10 O3' G B 100 -8.954 39.819 107.378 1.00 14.93 O
ATOM 11 C2' G B 100 -7.912 39.780 109.547 1.00 15.64 C
ATOM 12 O2' G B 100 -9.107 39.150 109.969 1.00 15.45 O
ATOM 13 C1' G B 100 -6.687 39.042 110.092 1.00 14.24 C
ATOM 14 N9 G B 100 -5.585 39.978 110.294 1.00 33.26 N
ATOM 15 C8 G B 100 -4.402 40.020 109.596 1.00 33.98 C
ATOM 16 N7 G B 100 -3.623 41.001 109.966 1.00 34.19 N
ATOM 17 C5 G B 100 -4.329 41.636 110.975 1.00 33.19 C
ATOM 18 C6 G B 100 -3.986 42.758 111.738 1.00 33.17 C
ATOM 19 O6 G B 100 -2.952 43.436 111.668 1.00 35.41 O
ATOM 20 N1 G B 100 -4.986 43.078 112.656 1.00 32.50 N
ATOM 21 C2 G B 100 -6.169 42.388 112.808 1.00 33.71 C
ATOM 22 N2 G B 100 -7.012 42.838 113.747 1.00 36.08 N
ATOM 23 N3 G B 100 -6.498 41.331 112.091 1.00 33.98 N
ATOM 24 C4 G B 100 -5.538 41.012 111.199 1.00 32.93 C
ATOM 25 P G B 101 -9.323 41.277 106.806 1.00 39.03 P
ATOM 26 OP1 G B 101 -10.652 41.140 106.135 1.00 39.03 O
ATOM 27 OP2 G B 101 -8.151 41.791 106.029 1.00 36.26 O
ATOM 28 O5' G B 101 -9.478 42.174 108.122 1.00 20.24 O
TER
ATOM 2 P A A 305 -1.050 52.682 117.951 1.00 64.43 P
ATOM 3 OP1 A A 305 -0.901 53.467 119.202 1.00 41.52 O
ATOM 4 OP2 A A 305 0.090 51.860 117.457 1.00 37.25 O
ATOM 5 O5' A A 305 -2.323 51.757 118.183 1.00 12.60 O
ATOM 6 C5' A A 305 -3.601 52.355 118.441 1.00 14.43 C
ATOM 7 C4' A A 305 -4.665 51.299 118.607 1.00 17.33 C
ATOM 8 O4' A A 305 -4.699 50.478 117.414 1.00 18.08 O
ATOM 9 C3' A A 305 -4.501 50.347 119.785 1.00 19.70 C
ATOM 10 O3' A A 305 -5.818 50.035 120.261 1.00 22.47 O
ATOM 11 C2' A A 305 -3.870 49.119 119.137 1.00 19.48 C
ATOM 12 O2' A A 305 -4.148 47.911 119.811 1.00 21.70 O
ATOM 13 C1' A A 305 -4.544 49.121 117.768 1.00 18.03 C
ATOM 14 N9 A A 305 -3.801 48.445 116.703 1.00 8.71 N
ATOM 15 C8 A A 305 -2.522 48.673 116.253 1.00 7.23 C
ATOM 16 N7 A A 305 -2.172 47.911 115.249 1.00 5.99 N
ATOM 17 C5 A A 305 -3.291 47.127 115.029 1.00 5.96 C
ATOM 18 C6 A A 305 -3.554 46.132 114.107 1.00 5.52 C
ATOM 19 N6 A A 305 -2.679 45.745 113.194 1.00 3.24 N
ATOM 20 N1 A A 305 -4.758 45.537 114.144 1.00 6.36 N
ATOM 21 C2 A A 305 -5.637 45.935 115.063 1.00 8.21 C
ATOM 22 N3 A A 305 -5.509 46.868 115.994 1.00 8.91 N
ATOM 23 C4 A A 305 -4.293 47.435 115.922 1.00 7.73 C
ATOM 24 P G A 306 -6.055 49.583 121.795 1.00 38.31 P
ATOM 25 OP1 G A 306 -4.764 49.665 122.542 1.00 38.43 O
ATOM 26 OP2 G A 306 -6.817 48.309 121.780 1.00 42.21 O
ATOM 27 O5' G A 306 -7.042 50.692 122.368 1.00 19.14 O
TER
ATOM 1 O3' G B 99 -3.563 37.326 105.449 1.00 14.97 O
ATOM 2 P G B 100 -4.505 38.560 105.101 1.00 10.50 P
ATOM 3 OP1 G B 100 -5.403 38.126 104.010 1.00 43.71 O
ATOM 4 OP2 G B 100 -3.625 39.741 104.918 1.00 46.89 O
ATOM 5 O5' G B 100 -5.381 38.750 106.411 1.00 16.24 O
ATOM 6 C5' G B 100 -6.415 37.819 106.703 1.00 15.99 C
ATOM 7 C4' G B 100 -7.160 38.218 107.950 1.00 15.20 C
ATOM 8 O4' G B 100 -6.290 38.102 109.104 1.00 14.71 O
ATOM 9 C3' G B 100 -7.718 39.630 108.047 1.00 15.38 C
ATOM 10 O3' G B 100 -8.954 39.819 107.378 1.00 14.93 O
ATOM 11 C2' G B 100 -7.912 39.780 109.547 1.00 15.64 C
ATOM 12 O2' G B 100 -9.107 39.150 109.969 1.00 15.45 O
ATOM 13 C1' G B 100 -6.687 39.042 110.092 1.00 14.24 C
ATOM 14 N9 G B 100 -5.585 39.978 110.294 1.00 33.26 N
ATOM 15 C8 G B 100 -4.402 40.020 109.596 1.00 33.98 C
ATOM 16 N7 G B 100 -3.623 41.001 109.966 1.00 34.19 N
ATOM 17 C5 G B 100 -4.329 41.636 110.975 1.00 33.19 C
ATOM 18 C6 G B 100 -3.986 42.758 111.738 1.00 33.17 C
ATOM 19 O6 G B 100 -2.952 43.436 111.668 1.00 35.41 O
ATOM 20 N1 G B 100 -4.986 43.078 112.656 1.00 32.50 N
ATOM 21 C2 G B 100 -6.169 42.388 112.808 1.00 33.71 C
ATOM 22 N2 G B 100 -7.012 42.838 113.747 1.00 36.08 N
ATOM 23 N3 G B 100 -6.498 41.331 112.091 1.00 33.98 N
ATOM 24 C4 G B 100 -5.538 41.012 111.199 1.00 32.93 C
ATOM 25 P G B 101 -9.323 41.277 106.806 1.00 39.03 P
ATOM 26 OP1 G B 101 -10.652 41.140 106.135 1.00 39.03 O
ATOM 27 OP2 G B 101 -8.151 41.791 106.029 1.00 36.26 O
ATOM 28 O5' G B 101 -9.478 42.174 108.122 1.00 20.24 O
TER
Atoms:
OP1: (-0.901,53.467,119.202)
OP2: (0.090,51.860,117.457)
C3': (-4.501,50.347,119.785)
C1': (-4.544,49.121,117.768)
C5': (-3.601,52.355,118.441)
O4': (-4.699,50.478,117.414)
C8: (-2.522,48.673,116.253)
O2': (-4.148,47.911,119.811)
C6: (-3.554,46.132,114.107)
C5: (-3.291,47.127,115.029)
C4: (-4.293,47.435,115.922)
P: (-1.050,52.682,117.951)
C4': (-4.665,51.299,118.607)
C2': (-3.870,49.119,119.137)
C2: (-5.637,45.935,115.063)
N1: (-4.758,45.537,114.144)
N3: (-5.509,46.868,115.994)
N6: (-2.679,45.745,113.194)
N7: (-2.172,47.911,115.249)
N9: (-3.801,48.445,116.703)
O5': (-2.323,51.757,118.183)
O3': (-5.818,50.035,120.261)
OP2: (0.090,51.860,117.457)
C3': (-4.501,50.347,119.785)
C1': (-4.544,49.121,117.768)
C5': (-3.601,52.355,118.441)
O4': (-4.699,50.478,117.414)
C8: (-2.522,48.673,116.253)
O2': (-4.148,47.911,119.811)
C6: (-3.554,46.132,114.107)
C5: (-3.291,47.127,115.029)
C4: (-4.293,47.435,115.922)
P: (-1.050,52.682,117.951)
C4': (-4.665,51.299,118.607)
C2': (-3.870,49.119,119.137)
C2: (-5.637,45.935,115.063)
N1: (-4.758,45.537,114.144)
N3: (-5.509,46.868,115.994)
N6: (-2.679,45.745,113.194)
N7: (-2.172,47.911,115.249)
N9: (-3.801,48.445,116.703)
O5': (-2.323,51.757,118.183)
O3': (-5.818,50.035,120.261)
OP1: (-5.403,38.126,104.010)
OP2: (-3.625,39.741,104.918)
C3': (-7.718,39.630,108.047)
C1': (-6.687,39.042,110.092)
C5': (-6.415,37.819,106.703)
O6: (-2.952,43.436,111.668)
O4': (-6.290,38.102,109.104)
C8: (-4.402,40.020,109.596)
C2: (-6.169,42.388,112.808)
C6: (-3.986,42.758,111.738)
C5: (-4.329,41.636,110.975)
C4: (-5.538,41.012,111.199)
P: (-4.505,38.560,105.101)
C4': (-7.160,38.218,107.950)
C2': (-7.912,39.780,109.547)
O2': (-9.107,39.150,109.969)
N1: (-4.986,43.078,112.656)
N2: (-7.012,42.838,113.747)
N3: (-6.498,41.331,112.091)
N7: (-3.623,41.001,109.966)
N9: (-5.585,39.978,110.294)
O5': (-5.381,38.750,106.411)
O3': (-8.954,39.819,107.378)
OP2: (-3.625,39.741,104.918)
C3': (-7.718,39.630,108.047)
C1': (-6.687,39.042,110.092)
C5': (-6.415,37.819,106.703)
O6: (-2.952,43.436,111.668)
O4': (-6.290,38.102,109.104)
C8: (-4.402,40.020,109.596)
C2: (-6.169,42.388,112.808)
C6: (-3.986,42.758,111.738)
C5: (-4.329,41.636,110.975)
C4: (-5.538,41.012,111.199)
P: (-4.505,38.560,105.101)
C4': (-7.160,38.218,107.950)
C2': (-7.912,39.780,109.547)
O2': (-9.107,39.150,109.969)
N1: (-4.986,43.078,112.656)
N2: (-7.012,42.838,113.747)
N3: (-6.498,41.331,112.091)
N7: (-3.623,41.001,109.966)
N9: (-5.585,39.978,110.294)
O5': (-5.381,38.750,106.411)
O3': (-8.954,39.819,107.378)
Image (generated by PyMOL):