Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A488:A498
Extra
PDB:
ATOM 1 O3' C A 487 112.808 15.544 33.322 1.00 68.48 O
ATOM 2 P C A 488 113.244 14.010 33.113 1.00 73.73 P
ATOM 3 OP1 C A 488 114.166 13.985 31.940 1.00 74.75 O
ATOM 4 OP2 C A 488 112.014 13.170 33.107 1.00 68.89 O
ATOM 5 O5' C A 488 114.037 13.645 34.455 1.00 55.22 O
ATOM 6 C5' C A 488 113.319 13.508 35.679 1.00 58.52 C
ATOM 7 C4' C A 488 114.246 13.221 36.843 1.00 62.76 C
ATOM 8 O4' C A 488 115.111 14.349 37.150 1.00 61.85 O
ATOM 9 C3' C A 488 113.461 13.003 38.128 1.00 59.95 C
ATOM 10 O3' C A 488 113.124 11.631 38.150 1.00 67.08 O
ATOM 11 C2' C A 488 114.450 13.361 39.233 1.00 61.10 C
ATOM 12 O2' C A 488 115.199 12.260 39.670 1.00 59.10 O
ATOM 13 C1' C A 488 115.384 14.363 38.544 1.00 62.45 C
ATOM 14 N1 C A 488 115.297 15.743 39.063 1.00 69.32 N
ATOM 15 C2 C A 488 115.791 16.022 40.359 1.00 69.78 C
ATOM 16 O2 C A 488 116.384 15.134 40.997 1.00 72.31 O
ATOM 17 N3 C A 488 115.616 17.251 40.874 1.00 70.44 N
ATOM 18 C4 C A 488 115.002 18.193 40.156 1.00 73.15 C
ATOM 19 N4 C A 488 114.811 19.390 40.727 1.00 79.01 N
ATOM 20 C5 C A 488 114.547 17.954 38.822 1.00 70.85 C
ATOM 21 C6 C A 488 114.715 16.730 38.321 1.00 71.24 C
ATOM 22 P A A 489 111.731 11.163 38.779 1.00 74.49 P
ATOM 23 OP1 A A 489 111.770 9.672 38.696 1.00 63.21 O
ATOM 24 OP2 A A 489 110.627 11.914 38.117 1.00 64.20 O
ATOM 25 O5' A A 489 111.863 11.609 40.304 1.00 63.99 O
TER
ATOM 1 O3' C B 497 109.530 27.751 38.083 1.00 69.90 O
ATOM 2 P G B 498 110.766 27.400 37.104 1.00 75.90 P
ATOM 3 OP1 G B 498 111.894 28.316 37.410 1.00 67.32 O
ATOM 4 OP2 G B 498 110.199 27.361 35.726 1.00 77.47 O
ATOM 5 O5' G B 498 111.226 25.923 37.521 1.00 74.19 O
ATOM 6 C5' G B 498 111.822 25.677 38.805 1.00 74.57 C
ATOM 7 C4' G B 498 112.454 24.286 38.893 1.00 71.63 C
ATOM 8 O4' G B 498 111.464 23.242 39.128 1.00 71.54 O
ATOM 9 C3' G B 498 113.279 23.759 37.727 1.00 73.45 C
ATOM 10 O3' G B 498 114.591 24.292 37.644 1.00 75.36 O
ATOM 11 C2' G B 498 113.344 22.267 38.024 1.00 73.14 C
ATOM 12 O2' G B 498 114.390 21.945 38.914 1.00 72.23 O
ATOM 13 C1' G B 498 111.965 22.006 38.642 1.00 73.53 C
ATOM 14 N9 G B 498 111.073 21.501 37.605 1.00 70.58 N
ATOM 15 C8 G B 498 110.515 22.215 36.572 1.00 73.83 C
ATOM 16 N7 G B 498 109.863 21.468 35.724 1.00 70.51 N
ATOM 17 C5 G B 498 109.971 20.191 36.241 1.00 67.09 C
ATOM 18 C6 G B 498 109.484 18.965 35.749 1.00 66.05 C
ATOM 19 O6 G B 498 108.840 18.749 34.719 1.00 66.24 O
ATOM 20 N1 G B 498 109.826 17.914 36.583 1.00 66.02 N
ATOM 21 C2 G B 498 110.553 18.025 37.740 1.00 67.69 C
ATOM 22 N2 G B 498 110.803 16.886 38.387 1.00 64.68 N
ATOM 23 N3 G B 498 111.008 19.163 38.218 1.00 69.74 N
ATOM 24 C4 G B 498 110.689 20.199 37.421 1.00 68.43 C
ATOM 25 P G B 499 115.219 24.614 36.196 1.00 83.51 P
ATOM 26 OP1 G B 499 116.613 25.116 36.360 1.00 77.61 O
ATOM 27 OP2 G B 499 114.223 25.450 35.478 1.00 86.32 O
ATOM 28 O5' G B 499 115.236 23.203 35.451 1.00 76.83 O
TER
ATOM 2 P C A 488 113.244 14.010 33.113 1.00 73.73 P
ATOM 3 OP1 C A 488 114.166 13.985 31.940 1.00 74.75 O
ATOM 4 OP2 C A 488 112.014 13.170 33.107 1.00 68.89 O
ATOM 5 O5' C A 488 114.037 13.645 34.455 1.00 55.22 O
ATOM 6 C5' C A 488 113.319 13.508 35.679 1.00 58.52 C
ATOM 7 C4' C A 488 114.246 13.221 36.843 1.00 62.76 C
ATOM 8 O4' C A 488 115.111 14.349 37.150 1.00 61.85 O
ATOM 9 C3' C A 488 113.461 13.003 38.128 1.00 59.95 C
ATOM 10 O3' C A 488 113.124 11.631 38.150 1.00 67.08 O
ATOM 11 C2' C A 488 114.450 13.361 39.233 1.00 61.10 C
ATOM 12 O2' C A 488 115.199 12.260 39.670 1.00 59.10 O
ATOM 13 C1' C A 488 115.384 14.363 38.544 1.00 62.45 C
ATOM 14 N1 C A 488 115.297 15.743 39.063 1.00 69.32 N
ATOM 15 C2 C A 488 115.791 16.022 40.359 1.00 69.78 C
ATOM 16 O2 C A 488 116.384 15.134 40.997 1.00 72.31 O
ATOM 17 N3 C A 488 115.616 17.251 40.874 1.00 70.44 N
ATOM 18 C4 C A 488 115.002 18.193 40.156 1.00 73.15 C
ATOM 19 N4 C A 488 114.811 19.390 40.727 1.00 79.01 N
ATOM 20 C5 C A 488 114.547 17.954 38.822 1.00 70.85 C
ATOM 21 C6 C A 488 114.715 16.730 38.321 1.00 71.24 C
ATOM 22 P A A 489 111.731 11.163 38.779 1.00 74.49 P
ATOM 23 OP1 A A 489 111.770 9.672 38.696 1.00 63.21 O
ATOM 24 OP2 A A 489 110.627 11.914 38.117 1.00 64.20 O
ATOM 25 O5' A A 489 111.863 11.609 40.304 1.00 63.99 O
TER
ATOM 1 O3' C B 497 109.530 27.751 38.083 1.00 69.90 O
ATOM 2 P G B 498 110.766 27.400 37.104 1.00 75.90 P
ATOM 3 OP1 G B 498 111.894 28.316 37.410 1.00 67.32 O
ATOM 4 OP2 G B 498 110.199 27.361 35.726 1.00 77.47 O
ATOM 5 O5' G B 498 111.226 25.923 37.521 1.00 74.19 O
ATOM 6 C5' G B 498 111.822 25.677 38.805 1.00 74.57 C
ATOM 7 C4' G B 498 112.454 24.286 38.893 1.00 71.63 C
ATOM 8 O4' G B 498 111.464 23.242 39.128 1.00 71.54 O
ATOM 9 C3' G B 498 113.279 23.759 37.727 1.00 73.45 C
ATOM 10 O3' G B 498 114.591 24.292 37.644 1.00 75.36 O
ATOM 11 C2' G B 498 113.344 22.267 38.024 1.00 73.14 C
ATOM 12 O2' G B 498 114.390 21.945 38.914 1.00 72.23 O
ATOM 13 C1' G B 498 111.965 22.006 38.642 1.00 73.53 C
ATOM 14 N9 G B 498 111.073 21.501 37.605 1.00 70.58 N
ATOM 15 C8 G B 498 110.515 22.215 36.572 1.00 73.83 C
ATOM 16 N7 G B 498 109.863 21.468 35.724 1.00 70.51 N
ATOM 17 C5 G B 498 109.971 20.191 36.241 1.00 67.09 C
ATOM 18 C6 G B 498 109.484 18.965 35.749 1.00 66.05 C
ATOM 19 O6 G B 498 108.840 18.749 34.719 1.00 66.24 O
ATOM 20 N1 G B 498 109.826 17.914 36.583 1.00 66.02 N
ATOM 21 C2 G B 498 110.553 18.025 37.740 1.00 67.69 C
ATOM 22 N2 G B 498 110.803 16.886 38.387 1.00 64.68 N
ATOM 23 N3 G B 498 111.008 19.163 38.218 1.00 69.74 N
ATOM 24 C4 G B 498 110.689 20.199 37.421 1.00 68.43 C
ATOM 25 P G B 499 115.219 24.614 36.196 1.00 83.51 P
ATOM 26 OP1 G B 499 116.613 25.116 36.360 1.00 77.61 O
ATOM 27 OP2 G B 499 114.223 25.450 35.478 1.00 86.32 O
ATOM 28 O5' G B 499 115.236 23.203 35.451 1.00 76.83 O
TER
Atoms:
C2: (115.791,16.022,40.359)
OP1: (114.166,13.985,31.940)
OP2: (112.014,13.170,33.107)
C4: (115.002,18.193,40.156)
O5': (114.037,13.645,34.455)
C3': (113.461,13.003,38.128)
C1': (115.384,14.363,38.544)
O4': (115.111,14.349,37.150)
C5': (113.319,13.508,35.679)
P: (113.244,14.010,33.113)
O2: (116.384,15.134,40.997)
C4': (114.246,13.221,36.843)
C2': (114.450,13.361,39.233)
O2': (115.199,12.260,39.670)
N1: (115.297,15.743,39.063)
N3: (115.616,17.251,40.874)
N4: (114.811,19.390,40.727)
C6: (114.715,16.730,38.321)
C5: (114.547,17.954,38.822)
O3': (113.124,11.631,38.150)
OP1: (114.166,13.985,31.940)
OP2: (112.014,13.170,33.107)
C4: (115.002,18.193,40.156)
O5': (114.037,13.645,34.455)
C3': (113.461,13.003,38.128)
C1': (115.384,14.363,38.544)
O4': (115.111,14.349,37.150)
C5': (113.319,13.508,35.679)
P: (113.244,14.010,33.113)
O2: (116.384,15.134,40.997)
C4': (114.246,13.221,36.843)
C2': (114.450,13.361,39.233)
O2': (115.199,12.260,39.670)
N1: (115.297,15.743,39.063)
N3: (115.616,17.251,40.874)
N4: (114.811,19.390,40.727)
C6: (114.715,16.730,38.321)
C5: (114.547,17.954,38.822)
O3': (113.124,11.631,38.150)
OP1: (111.894,28.316,37.410)
OP2: (110.199,27.361,35.726)
C3': (113.279,23.759,37.727)
C1': (111.965,22.006,38.642)
C5': (111.822,25.677,38.805)
O6: (108.840,18.749,34.719)
O4': (111.464,23.242,39.128)
C8: (110.515,22.215,36.572)
C2: (110.553,18.025,37.740)
C6: (109.484,18.965,35.749)
C5: (109.971,20.191,36.241)
C4: (110.689,20.199,37.421)
P: (110.766,27.400,37.104)
C4': (112.454,24.286,38.893)
C2': (113.344,22.267,38.024)
O2': (114.390,21.945,38.914)
N1: (109.826,17.914,36.583)
N2: (110.803,16.886,38.387)
N3: (111.008,19.163,38.218)
N7: (109.863,21.468,35.724)
N9: (111.073,21.501,37.605)
O5': (111.226,25.923,37.521)
O3': (114.591,24.292,37.644)
OP2: (110.199,27.361,35.726)
C3': (113.279,23.759,37.727)
C1': (111.965,22.006,38.642)
C5': (111.822,25.677,38.805)
O6: (108.840,18.749,34.719)
O4': (111.464,23.242,39.128)
C8: (110.515,22.215,36.572)
C2: (110.553,18.025,37.740)
C6: (109.484,18.965,35.749)
C5: (109.971,20.191,36.241)
C4: (110.689,20.199,37.421)
P: (110.766,27.400,37.104)
C4': (112.454,24.286,38.893)
C2': (113.344,22.267,38.024)
O2': (114.390,21.945,38.914)
N1: (109.826,17.914,36.583)
N2: (110.803,16.886,38.387)
N3: (111.008,19.163,38.218)
N7: (109.863,21.468,35.724)
N9: (111.073,21.501,37.605)
O5': (111.226,25.923,37.521)
O3': (114.591,24.292,37.644)
Image (generated by PyMOL):