Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A562:A577
Extra
PDB:
ATOM 1 O3' U A 561 -56.108 129.128 192.711 1.00 0.01 O
ATOM 2 P A A 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 3 OP1 A A 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 4 OP2 A A 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 5 O5' A A 562 -55.269 131.415 192.992 1.00 0.01 O
ATOM 6 C5' A A 562 -54.065 130.974 192.419 1.00 0.01 C
ATOM 7 C4' A A 562 -52.923 131.864 192.786 1.00 0.01 C
ATOM 8 O4' A A 562 -51.693 131.238 192.370 1.00 0.01 O
ATOM 9 C3' A A 562 -52.875 133.213 192.097 1.00 0.01 C
ATOM 10 O3' A A 562 -53.766 134.167 192.660 1.00 0.01 O
ATOM 11 C2' A A 562 -51.414 133.582 192.249 1.00 0.01 C
ATOM 12 O2' A A 562 -51.156 134.062 193.550 1.00 0.01 O
ATOM 13 C1' A A 562 -50.735 132.223 192.109 1.00 0.01 C
ATOM 14 N9 A A 562 -50.149 132.002 190.771 1.00 0.01 N
ATOM 15 C8 A A 562 -50.424 131.107 189.797 1.00 0.01 C
ATOM 16 N7 A A 562 -49.640 131.201 188.749 1.00 0.01 N
ATOM 17 C5 A A 562 -48.777 132.213 189.087 1.00 0.01 C
ATOM 18 C6 A A 562 -47.697 132.824 188.423 1.00 0.01 C
ATOM 19 N6 A A 562 -47.245 132.504 187.214 1.00 0.01 N
ATOM 20 N1 A A 562 -47.068 133.831 189.061 1.00 0.01 N
ATOM 21 C2 A A 562 -47.474 134.189 190.283 1.00 0.01 C
ATOM 22 N3 A A 562 -48.457 133.688 190.988 1.00 0.01 N
ATOM 23 C4 A A 562 -49.078 132.704 190.325 1.00 0.01 C
ATOM 24 P C A 563 -54.563 135.204 191.716 1.00 0.01 P
ATOM 25 OP1 C A 563 -55.539 135.907 192.570 1.00 0.01 O
ATOM 26 OP2 C A 563 -55.054 134.450 190.543 1.00 0.01 O
ATOM 27 O5' C A 563 -53.425 136.200 191.275 1.00 0.01 O
TER
ATOM 1 O3' G B 576 -40.145 137.336 181.155 1.00 0.01 O
ATOM 2 P G B 577 -39.210 136.076 181.494 1.00 0.01 P
ATOM 3 OP1 G B 577 -38.013 136.179 180.650 1.00 0.01 O
ATOM 4 OP2 G B 577 -40.052 134.843 181.403 1.00 0.01 O
ATOM 5 O5' G B 577 -38.825 136.338 183.011 1.00 0.01 O
ATOM 6 C5' G B 577 -38.515 137.648 183.483 1.00 0.01 C
ATOM 7 C4' G B 577 -38.820 137.798 184.956 1.00 0.01 C
ATOM 8 O4' G B 577 -40.243 138.020 185.147 1.00 0.01 O
ATOM 9 C3' G B 577 -38.500 136.600 185.836 1.00 0.01 C
ATOM 10 O3' G B 577 -37.146 136.562 186.226 1.00 0.01 O
ATOM 11 C2' G B 577 -39.452 136.781 187.006 1.00 0.01 C
ATOM 12 O2' G B 577 -38.932 137.703 187.952 1.00 0.01 O
ATOM 13 C1' G B 577 -40.676 137.398 186.328 1.00 0.01 C
ATOM 14 N9 G B 577 -41.661 136.377 185.967 1.00 0.01 N
ATOM 15 C8 G B 577 -41.561 135.541 184.896 1.00 0.01 C
ATOM 16 N7 G B 577 -42.563 134.718 184.803 1.00 0.01 N
ATOM 17 C5 G B 577 -43.352 135.023 185.892 1.00 0.01 C
ATOM 18 C6 G B 577 -44.558 134.431 186.297 1.00 0.01 C
ATOM 19 O6 G B 577 -45.169 133.505 185.758 1.00 0.01 O
ATOM 20 N1 G B 577 -45.004 135.035 187.453 1.00 0.01 N
ATOM 21 C2 G B 577 -44.359 136.064 188.087 1.00 0.01 C
ATOM 22 N2 G B 577 -44.945 136.550 189.169 1.00 0.01 N
ATOM 23 N3 G B 577 -43.241 136.619 187.724 1.00 0.01 N
ATOM 24 C4 G B 577 -42.805 136.047 186.618 1.00 0.01 C
ATOM 25 P G B 578 -36.203 135.338 185.793 1.00 0.58 P
ATOM 26 OP1 G B 578 -34.883 135.932 185.423 1.00 0.58 O
ATOM 27 OP2 G B 578 -36.954 134.540 184.775 1.00 0.58 O
ATOM 28 O5' G B 578 -36.058 134.487 187.132 1.00 0.58 O
TER
ATOM 2 P A A 562 -56.603 130.636 192.697 1.00 0.01 P
ATOM 3 OP1 A A 562 -57.556 130.801 193.834 1.00 0.01 O
ATOM 4 OP2 A A 562 -57.077 130.910 191.322 1.00 0.01 O
ATOM 5 O5' A A 562 -55.269 131.415 192.992 1.00 0.01 O
ATOM 6 C5' A A 562 -54.065 130.974 192.419 1.00 0.01 C
ATOM 7 C4' A A 562 -52.923 131.864 192.786 1.00 0.01 C
ATOM 8 O4' A A 562 -51.693 131.238 192.370 1.00 0.01 O
ATOM 9 C3' A A 562 -52.875 133.213 192.097 1.00 0.01 C
ATOM 10 O3' A A 562 -53.766 134.167 192.660 1.00 0.01 O
ATOM 11 C2' A A 562 -51.414 133.582 192.249 1.00 0.01 C
ATOM 12 O2' A A 562 -51.156 134.062 193.550 1.00 0.01 O
ATOM 13 C1' A A 562 -50.735 132.223 192.109 1.00 0.01 C
ATOM 14 N9 A A 562 -50.149 132.002 190.771 1.00 0.01 N
ATOM 15 C8 A A 562 -50.424 131.107 189.797 1.00 0.01 C
ATOM 16 N7 A A 562 -49.640 131.201 188.749 1.00 0.01 N
ATOM 17 C5 A A 562 -48.777 132.213 189.087 1.00 0.01 C
ATOM 18 C6 A A 562 -47.697 132.824 188.423 1.00 0.01 C
ATOM 19 N6 A A 562 -47.245 132.504 187.214 1.00 0.01 N
ATOM 20 N1 A A 562 -47.068 133.831 189.061 1.00 0.01 N
ATOM 21 C2 A A 562 -47.474 134.189 190.283 1.00 0.01 C
ATOM 22 N3 A A 562 -48.457 133.688 190.988 1.00 0.01 N
ATOM 23 C4 A A 562 -49.078 132.704 190.325 1.00 0.01 C
ATOM 24 P C A 563 -54.563 135.204 191.716 1.00 0.01 P
ATOM 25 OP1 C A 563 -55.539 135.907 192.570 1.00 0.01 O
ATOM 26 OP2 C A 563 -55.054 134.450 190.543 1.00 0.01 O
ATOM 27 O5' C A 563 -53.425 136.200 191.275 1.00 0.01 O
TER
ATOM 1 O3' G B 576 -40.145 137.336 181.155 1.00 0.01 O
ATOM 2 P G B 577 -39.210 136.076 181.494 1.00 0.01 P
ATOM 3 OP1 G B 577 -38.013 136.179 180.650 1.00 0.01 O
ATOM 4 OP2 G B 577 -40.052 134.843 181.403 1.00 0.01 O
ATOM 5 O5' G B 577 -38.825 136.338 183.011 1.00 0.01 O
ATOM 6 C5' G B 577 -38.515 137.648 183.483 1.00 0.01 C
ATOM 7 C4' G B 577 -38.820 137.798 184.956 1.00 0.01 C
ATOM 8 O4' G B 577 -40.243 138.020 185.147 1.00 0.01 O
ATOM 9 C3' G B 577 -38.500 136.600 185.836 1.00 0.01 C
ATOM 10 O3' G B 577 -37.146 136.562 186.226 1.00 0.01 O
ATOM 11 C2' G B 577 -39.452 136.781 187.006 1.00 0.01 C
ATOM 12 O2' G B 577 -38.932 137.703 187.952 1.00 0.01 O
ATOM 13 C1' G B 577 -40.676 137.398 186.328 1.00 0.01 C
ATOM 14 N9 G B 577 -41.661 136.377 185.967 1.00 0.01 N
ATOM 15 C8 G B 577 -41.561 135.541 184.896 1.00 0.01 C
ATOM 16 N7 G B 577 -42.563 134.718 184.803 1.00 0.01 N
ATOM 17 C5 G B 577 -43.352 135.023 185.892 1.00 0.01 C
ATOM 18 C6 G B 577 -44.558 134.431 186.297 1.00 0.01 C
ATOM 19 O6 G B 577 -45.169 133.505 185.758 1.00 0.01 O
ATOM 20 N1 G B 577 -45.004 135.035 187.453 1.00 0.01 N
ATOM 21 C2 G B 577 -44.359 136.064 188.087 1.00 0.01 C
ATOM 22 N2 G B 577 -44.945 136.550 189.169 1.00 0.01 N
ATOM 23 N3 G B 577 -43.241 136.619 187.724 1.00 0.01 N
ATOM 24 C4 G B 577 -42.805 136.047 186.618 1.00 0.01 C
ATOM 25 P G B 578 -36.203 135.338 185.793 1.00 0.58 P
ATOM 26 OP1 G B 578 -34.883 135.932 185.423 1.00 0.58 O
ATOM 27 OP2 G B 578 -36.954 134.540 184.775 1.00 0.58 O
ATOM 28 O5' G B 578 -36.058 134.487 187.132 1.00 0.58 O
TER
Atoms:
OP1: (-57.556,130.801,193.834)
OP2: (-57.077,130.910,191.322)
C3': (-52.875,133.213,192.097)
C1': (-50.735,132.223,192.109)
C5': (-54.065,130.974,192.419)
O4': (-51.693,131.238,192.370)
C8: (-50.424,131.107,189.797)
O2': (-51.156,134.062,193.550)
C6: (-47.697,132.824,188.423)
C5: (-48.777,132.213,189.087)
C4: (-49.078,132.704,190.325)
P: (-56.603,130.636,192.697)
C4': (-52.923,131.864,192.786)
C2': (-51.414,133.582,192.249)
C2: (-47.474,134.189,190.283)
N1: (-47.068,133.831,189.061)
N3: (-48.457,133.688,190.988)
N6: (-47.245,132.504,187.214)
N7: (-49.640,131.201,188.749)
N9: (-50.149,132.002,190.771)
O5': (-55.269,131.415,192.992)
O3': (-53.766,134.167,192.660)
OP2: (-57.077,130.910,191.322)
C3': (-52.875,133.213,192.097)
C1': (-50.735,132.223,192.109)
C5': (-54.065,130.974,192.419)
O4': (-51.693,131.238,192.370)
C8: (-50.424,131.107,189.797)
O2': (-51.156,134.062,193.550)
C6: (-47.697,132.824,188.423)
C5: (-48.777,132.213,189.087)
C4: (-49.078,132.704,190.325)
P: (-56.603,130.636,192.697)
C4': (-52.923,131.864,192.786)
C2': (-51.414,133.582,192.249)
C2: (-47.474,134.189,190.283)
N1: (-47.068,133.831,189.061)
N3: (-48.457,133.688,190.988)
N6: (-47.245,132.504,187.214)
N7: (-49.640,131.201,188.749)
N9: (-50.149,132.002,190.771)
O5': (-55.269,131.415,192.992)
O3': (-53.766,134.167,192.660)
OP1: (-38.013,136.179,180.650)
OP2: (-40.052,134.843,181.403)
C3': (-38.500,136.600,185.836)
C1': (-40.676,137.398,186.328)
C5': (-38.515,137.648,183.483)
O6: (-45.169,133.505,185.758)
O4': (-40.243,138.020,185.147)
C8: (-41.561,135.541,184.896)
C2: (-44.359,136.064,188.087)
C6: (-44.558,134.431,186.297)
C5: (-43.352,135.023,185.892)
C4: (-42.805,136.047,186.618)
P: (-39.210,136.076,181.494)
C4': (-38.820,137.798,184.956)
C2': (-39.452,136.781,187.006)
O2': (-38.932,137.703,187.952)
N1: (-45.004,135.035,187.453)
N2: (-44.945,136.550,189.169)
N3: (-43.241,136.619,187.724)
N7: (-42.563,134.718,184.803)
N9: (-41.661,136.377,185.967)
O5': (-38.825,136.338,183.011)
O3': (-37.146,136.562,186.226)
OP2: (-40.052,134.843,181.403)
C3': (-38.500,136.600,185.836)
C1': (-40.676,137.398,186.328)
C5': (-38.515,137.648,183.483)
O6: (-45.169,133.505,185.758)
O4': (-40.243,138.020,185.147)
C8: (-41.561,135.541,184.896)
C2: (-44.359,136.064,188.087)
C6: (-44.558,134.431,186.297)
C5: (-43.352,135.023,185.892)
C4: (-42.805,136.047,186.618)
P: (-39.210,136.076,181.494)
C4': (-38.820,137.798,184.956)
C2': (-39.452,136.781,187.006)
O2': (-38.932,137.703,187.952)
N1: (-45.004,135.035,187.453)
N2: (-44.945,136.550,189.169)
N3: (-43.241,136.619,187.724)
N7: (-42.563,134.718,184.803)
N9: (-41.661,136.377,185.967)
O5': (-38.825,136.338,183.011)
O3': (-37.146,136.562,186.226)
Image (generated by PyMOL):