Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1039:A1077
Extra
PDB:
ATOM 1 O3' G A1038 127.924 -64.803 27.919 1.00 64.70 O
ATOM 2 P A A1039 129.237 -65.564 28.383 1.00 56.43 P
ATOM 3 OP1 A A1039 129.746 -64.819 29.557 1.00 58.47 O
ATOM 4 OP2 A A1039 130.084 -65.708 27.174 1.00 56.43 O
ATOM 5 O5' A A1039 128.675 -66.984 28.827 1.00 50.67 O
ATOM 6 C5' A A1039 127.986 -67.125 30.053 1.00 50.33 C
ATOM 7 C4' A A1039 127.656 -68.567 30.282 1.00 55.36 C
ATOM 8 O4' A A1039 126.824 -69.023 29.193 1.00 61.10 O
ATOM 9 C3' A A1039 128.827 -69.538 30.264 1.00 60.98 C
ATOM 10 O3' A A1039 129.458 -69.638 31.525 1.00 68.93 O
ATOM 11 C2' A A1039 128.163 -70.859 29.917 1.00 65.42 C
ATOM 12 O2' A A1039 127.633 -71.495 31.060 1.00 72.69 O
ATOM 13 C1' A A1039 127.029 -70.412 28.994 1.00 58.41 C
ATOM 14 N9 A A1039 127.350 -70.645 27.591 1.00 54.96 N
ATOM 15 C8 A A1039 128.010 -69.816 26.719 1.00 56.11 C
ATOM 16 N7 A A1039 128.151 -70.325 25.518 1.00 55.60 N
ATOM 17 C5 A A1039 127.537 -71.567 25.605 1.00 54.78 C
ATOM 18 C6 A A1039 127.329 -72.588 24.665 1.00 51.58 C
ATOM 19 N6 A A1039 127.728 -72.514 23.395 1.00 46.44 N
ATOM 20 N1 A A1039 126.679 -73.698 25.076 1.00 48.97 N
ATOM 21 C2 A A1039 126.263 -73.763 26.345 1.00 50.98 C
ATOM 22 N3 A A1039 126.390 -72.868 27.320 1.00 53.58 N
ATOM 23 C4 A A1039 127.043 -71.778 26.878 1.00 54.20 C
ATOM 24 P U A1040 131.050 -69.863 31.587 1.00 72.59 P
ATOM 25 OP1 U A1040 131.599 -68.693 32.341 1.00 63.00 O
ATOM 26 OP2 U A1040 131.520 -70.131 30.192 1.00 59.42 O
ATOM 27 O5' U A1040 131.218 -71.198 32.468 1.00 68.57 O
TER
ATOM 1 O3' C B1076 124.274 -82.611 17.070 1.00 53.38 O
ATOM 2 P G B1077 123.485 -81.235 16.792 1.00 40.01 P
ATOM 3 OP1 G B1077 122.231 -81.579 16.079 1.00 47.19 O
ATOM 4 OP2 G B1077 124.461 -80.323 16.151 1.00 46.22 O
ATOM 5 O5' G B1077 123.112 -80.690 18.248 1.00 42.32 O
ATOM 6 C5' G B1077 121.917 -81.138 18.910 1.00 43.47 C
ATOM 7 C4' G B1077 122.109 -81.238 20.420 1.00 47.80 C
ATOM 8 O4' G B1077 123.522 -81.353 20.739 1.00 48.63 O
ATOM 9 C3' G B1077 121.641 -80.069 21.286 1.00 50.45 C
ATOM 10 O3' G B1077 120.251 -80.043 21.567 1.00 57.92 O
ATOM 11 C2' G B1077 122.456 -80.253 22.556 1.00 50.60 C
ATOM 12 O2' G B1077 121.949 -81.231 23.446 1.00 52.63 O
ATOM 13 C1' G B1077 123.787 -80.721 21.984 1.00 50.39 C
ATOM 14 N9 G B1077 124.629 -79.556 21.746 1.00 45.82 N
ATOM 15 C8 G B1077 125.239 -79.177 20.570 1.00 50.24 C
ATOM 16 N7 G B1077 125.911 -78.065 20.678 1.00 49.17 N
ATOM 17 C5 G B1077 125.737 -77.693 21.999 1.00 48.01 C
ATOM 18 C6 G B1077 126.229 -76.592 22.694 1.00 49.87 C
ATOM 19 O6 G B1077 126.955 -75.684 22.271 1.00 46.90 O
ATOM 20 N1 G B1077 125.810 -76.595 24.017 1.00 48.92 N
ATOM 21 C2 G B1077 125.018 -77.550 24.591 1.00 49.52 C
ATOM 22 N2 G B1077 124.718 -77.372 25.887 1.00 53.36 N
ATOM 23 N3 G B1077 124.556 -78.595 23.950 1.00 44.70 N
ATOM 24 C4 G B1077 124.950 -78.603 22.669 1.00 43.52 C
ATOM 25 P C B1078 119.449 -78.658 21.420 1.00 52.85 P
ATOM 26 OP1 C B1078 117.998 -79.000 21.450 1.00 50.25 O
ATOM 27 OP2 C B1078 120.025 -77.944 20.248 1.00 61.47 O
ATOM 28 O5' C B1078 119.805 -77.783 22.713 1.00 49.94 O
TER
ATOM 2 P A A1039 129.237 -65.564 28.383 1.00 56.43 P
ATOM 3 OP1 A A1039 129.746 -64.819 29.557 1.00 58.47 O
ATOM 4 OP2 A A1039 130.084 -65.708 27.174 1.00 56.43 O
ATOM 5 O5' A A1039 128.675 -66.984 28.827 1.00 50.67 O
ATOM 6 C5' A A1039 127.986 -67.125 30.053 1.00 50.33 C
ATOM 7 C4' A A1039 127.656 -68.567 30.282 1.00 55.36 C
ATOM 8 O4' A A1039 126.824 -69.023 29.193 1.00 61.10 O
ATOM 9 C3' A A1039 128.827 -69.538 30.264 1.00 60.98 C
ATOM 10 O3' A A1039 129.458 -69.638 31.525 1.00 68.93 O
ATOM 11 C2' A A1039 128.163 -70.859 29.917 1.00 65.42 C
ATOM 12 O2' A A1039 127.633 -71.495 31.060 1.00 72.69 O
ATOM 13 C1' A A1039 127.029 -70.412 28.994 1.00 58.41 C
ATOM 14 N9 A A1039 127.350 -70.645 27.591 1.00 54.96 N
ATOM 15 C8 A A1039 128.010 -69.816 26.719 1.00 56.11 C
ATOM 16 N7 A A1039 128.151 -70.325 25.518 1.00 55.60 N
ATOM 17 C5 A A1039 127.537 -71.567 25.605 1.00 54.78 C
ATOM 18 C6 A A1039 127.329 -72.588 24.665 1.00 51.58 C
ATOM 19 N6 A A1039 127.728 -72.514 23.395 1.00 46.44 N
ATOM 20 N1 A A1039 126.679 -73.698 25.076 1.00 48.97 N
ATOM 21 C2 A A1039 126.263 -73.763 26.345 1.00 50.98 C
ATOM 22 N3 A A1039 126.390 -72.868 27.320 1.00 53.58 N
ATOM 23 C4 A A1039 127.043 -71.778 26.878 1.00 54.20 C
ATOM 24 P U A1040 131.050 -69.863 31.587 1.00 72.59 P
ATOM 25 OP1 U A1040 131.599 -68.693 32.341 1.00 63.00 O
ATOM 26 OP2 U A1040 131.520 -70.131 30.192 1.00 59.42 O
ATOM 27 O5' U A1040 131.218 -71.198 32.468 1.00 68.57 O
TER
ATOM 1 O3' C B1076 124.274 -82.611 17.070 1.00 53.38 O
ATOM 2 P G B1077 123.485 -81.235 16.792 1.00 40.01 P
ATOM 3 OP1 G B1077 122.231 -81.579 16.079 1.00 47.19 O
ATOM 4 OP2 G B1077 124.461 -80.323 16.151 1.00 46.22 O
ATOM 5 O5' G B1077 123.112 -80.690 18.248 1.00 42.32 O
ATOM 6 C5' G B1077 121.917 -81.138 18.910 1.00 43.47 C
ATOM 7 C4' G B1077 122.109 -81.238 20.420 1.00 47.80 C
ATOM 8 O4' G B1077 123.522 -81.353 20.739 1.00 48.63 O
ATOM 9 C3' G B1077 121.641 -80.069 21.286 1.00 50.45 C
ATOM 10 O3' G B1077 120.251 -80.043 21.567 1.00 57.92 O
ATOM 11 C2' G B1077 122.456 -80.253 22.556 1.00 50.60 C
ATOM 12 O2' G B1077 121.949 -81.231 23.446 1.00 52.63 O
ATOM 13 C1' G B1077 123.787 -80.721 21.984 1.00 50.39 C
ATOM 14 N9 G B1077 124.629 -79.556 21.746 1.00 45.82 N
ATOM 15 C8 G B1077 125.239 -79.177 20.570 1.00 50.24 C
ATOM 16 N7 G B1077 125.911 -78.065 20.678 1.00 49.17 N
ATOM 17 C5 G B1077 125.737 -77.693 21.999 1.00 48.01 C
ATOM 18 C6 G B1077 126.229 -76.592 22.694 1.00 49.87 C
ATOM 19 O6 G B1077 126.955 -75.684 22.271 1.00 46.90 O
ATOM 20 N1 G B1077 125.810 -76.595 24.017 1.00 48.92 N
ATOM 21 C2 G B1077 125.018 -77.550 24.591 1.00 49.52 C
ATOM 22 N2 G B1077 124.718 -77.372 25.887 1.00 53.36 N
ATOM 23 N3 G B1077 124.556 -78.595 23.950 1.00 44.70 N
ATOM 24 C4 G B1077 124.950 -78.603 22.669 1.00 43.52 C
ATOM 25 P C B1078 119.449 -78.658 21.420 1.00 52.85 P
ATOM 26 OP1 C B1078 117.998 -79.000 21.450 1.00 50.25 O
ATOM 27 OP2 C B1078 120.025 -77.944 20.248 1.00 61.47 O
ATOM 28 O5' C B1078 119.805 -77.783 22.713 1.00 49.94 O
TER
Atoms:
OP1: (129.746,-64.819,29.557)
OP2: (130.084,-65.708,27.174)
C3': (128.827,-69.538,30.264)
C1': (127.029,-70.412,28.994)
C5': (127.986,-67.125,30.053)
O4': (126.824,-69.023,29.193)
C8: (128.010,-69.816,26.719)
O2': (127.633,-71.495,31.060)
C6: (127.329,-72.588,24.665)
C5: (127.537,-71.567,25.605)
C4: (127.043,-71.778,26.878)
P: (129.237,-65.564,28.383)
C4': (127.656,-68.567,30.282)
C2': (128.163,-70.859,29.917)
C2: (126.263,-73.763,26.345)
N1: (126.679,-73.698,25.076)
N3: (126.390,-72.868,27.320)
N6: (127.728,-72.514,23.395)
N7: (128.151,-70.325,25.518)
N9: (127.350,-70.645,27.591)
O5': (128.675,-66.984,28.827)
O3': (129.458,-69.638,31.525)
OP2: (130.084,-65.708,27.174)
C3': (128.827,-69.538,30.264)
C1': (127.029,-70.412,28.994)
C5': (127.986,-67.125,30.053)
O4': (126.824,-69.023,29.193)
C8: (128.010,-69.816,26.719)
O2': (127.633,-71.495,31.060)
C6: (127.329,-72.588,24.665)
C5: (127.537,-71.567,25.605)
C4: (127.043,-71.778,26.878)
P: (129.237,-65.564,28.383)
C4': (127.656,-68.567,30.282)
C2': (128.163,-70.859,29.917)
C2: (126.263,-73.763,26.345)
N1: (126.679,-73.698,25.076)
N3: (126.390,-72.868,27.320)
N6: (127.728,-72.514,23.395)
N7: (128.151,-70.325,25.518)
N9: (127.350,-70.645,27.591)
O5': (128.675,-66.984,28.827)
O3': (129.458,-69.638,31.525)
OP1: (122.231,-81.579,16.079)
OP2: (124.461,-80.323,16.151)
C3': (121.641,-80.069,21.286)
C1': (123.787,-80.721,21.984)
C5': (121.917,-81.138,18.910)
O6: (126.955,-75.684,22.271)
O4': (123.522,-81.353,20.739)
C8: (125.239,-79.177,20.570)
C2: (125.018,-77.550,24.591)
C6: (126.229,-76.592,22.694)
C5: (125.737,-77.693,21.999)
C4: (124.950,-78.603,22.669)
P: (123.485,-81.235,16.792)
C4': (122.109,-81.238,20.420)
C2': (122.456,-80.253,22.556)
O2': (121.949,-81.231,23.446)
N1: (125.810,-76.595,24.017)
N2: (124.718,-77.372,25.887)
N3: (124.556,-78.595,23.950)
N7: (125.911,-78.065,20.678)
N9: (124.629,-79.556,21.746)
O5': (123.112,-80.690,18.248)
O3': (120.251,-80.043,21.567)
OP2: (124.461,-80.323,16.151)
C3': (121.641,-80.069,21.286)
C1': (123.787,-80.721,21.984)
C5': (121.917,-81.138,18.910)
O6: (126.955,-75.684,22.271)
O4': (123.522,-81.353,20.739)
C8: (125.239,-79.177,20.570)
C2: (125.018,-77.550,24.591)
C6: (126.229,-76.592,22.694)
C5: (125.737,-77.693,21.999)
C4: (124.950,-78.603,22.669)
P: (123.485,-81.235,16.792)
C4': (122.109,-81.238,20.420)
C2': (122.456,-80.253,22.556)
O2': (121.949,-81.231,23.446)
N1: (125.810,-76.595,24.017)
N2: (124.718,-77.372,25.887)
N3: (124.556,-78.595,23.950)
N7: (125.911,-78.065,20.678)
N9: (124.629,-79.556,21.746)
O5': (123.112,-80.690,18.248)
O3': (120.251,-80.043,21.567)
Image (generated by PyMOL):