Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R107:R9
Extra
PDB:
ATOM 1 O3' C A 106 53.035 -29.519 10.109 1.00 54.36 O
ATOM 2 P A A 107 54.537 -29.832 9.651 1.00 56.76 P
ATOM 3 OP1 A A 107 54.614 -29.577 8.194 1.00 57.35 O
ATOM 4 OP2 A A 107 54.943 -31.146 10.196 1.00 54.38 O
ATOM 5 O5' A A 107 55.392 -28.712 10.405 1.00 56.96 O
ATOM 6 C5' A A 107 55.119 -27.328 10.245 1.00 55.11 C
ATOM 7 C4' A A 107 55.252 -26.627 11.580 1.00 53.59 C
ATOM 8 O4' A A 107 54.396 -27.262 12.566 1.00 52.90 O
ATOM 9 C3' A A 107 56.630 -26.699 12.216 1.00 52.01 C
ATOM 10 O3' A A 107 57.534 -25.769 11.626 1.00 50.21 O
ATOM 11 C2' A A 107 56.289 -26.361 13.661 1.00 51.45 C
ATOM 12 O2' A A 107 56.093 -24.980 13.899 1.00 52.83 O
ATOM 13 C1' A A 107 54.998 -27.148 13.845 1.00 48.02 C
ATOM 14 N9 A A 107 55.242 -28.476 14.398 1.00 45.46 N
ATOM 15 C8 A A 107 55.331 -29.671 13.733 1.00 44.74 C
ATOM 16 N7 A A 107 55.559 -30.703 14.513 1.00 45.19 N
ATOM 17 C5 A A 107 55.641 -30.138 15.773 1.00 43.85 C
ATOM 18 C6 A A 107 55.875 -30.690 17.043 1.00 44.92 C
ATOM 19 N6 A A 107 56.077 -31.991 17.256 1.00 43.63 N
ATOM 20 N1 A A 107 55.887 -29.845 18.090 1.00 43.24 N
ATOM 21 C2 A A 107 55.688 -28.538 17.888 1.00 44.74 C
ATOM 22 N3 A A 107 55.459 -27.898 16.748 1.00 42.11 N
ATOM 23 C4 A A 107 55.449 -28.766 15.722 1.00 45.36 C
ATOM 24 P C A 108 59.097 -26.093 11.586 1.00 50.11 P
ATOM 25 OP1 C A 108 59.788 -24.966 10.919 1.00 49.37 O
ATOM 26 OP2 C A 108 59.284 -27.483 11.125 1.00 47.53 O
ATOM 27 O5' C A 108 59.494 -26.031 13.128 1.00 47.71 O
TER
ATOM 1 O3' G B 8 60.813 -35.524 26.742 1.00 37.65 O
ATOM 2 P G B 9 59.273 -35.508 27.146 1.00 38.68 P
ATOM 3 OP1 G B 9 59.218 -35.866 28.575 1.00 42.47 O
ATOM 4 OP2 G B 9 58.470 -36.243 26.149 1.00 41.85 O
ATOM 5 O5' G B 9 58.881 -33.975 26.972 1.00 37.17 O
ATOM 6 C5' G B 9 59.450 -32.981 27.817 1.00 39.31 C
ATOM 7 C4' G B 9 59.130 -31.607 27.272 1.00 39.36 C
ATOM 8 O4' G B 9 59.640 -31.518 25.926 1.00 37.81 O
ATOM 9 C3' G B 9 57.659 -31.296 27.094 1.00 36.71 C
ATOM 10 O3' G B 9 57.062 -30.940 28.327 1.00 41.54 O
ATOM 11 C2' G B 9 57.712 -30.167 26.076 1.00 37.74 C
ATOM 12 O2' G B 9 58.110 -28.916 26.578 1.00 37.01 O
ATOM 13 C1' G B 9 58.792 -30.704 25.154 1.00 37.80 C
ATOM 14 N9 G B 9 58.295 -31.499 24.042 1.00 37.50 N
ATOM 15 C8 G B 9 58.140 -32.864 23.933 1.00 36.82 C
ATOM 16 N7 G B 9 57.687 -33.237 22.753 1.00 35.91 N
ATOM 17 C5 G B 9 57.533 -32.045 22.060 1.00 33.56 C
ATOM 18 C6 G B 9 57.073 -31.786 20.749 1.00 36.43 C
ATOM 19 O6 G B 9 56.700 -32.594 19.894 1.00 37.29 O
ATOM 20 N1 G B 9 57.082 -30.431 20.440 1.00 37.01 N
ATOM 21 C2 G B 9 57.466 -29.438 21.314 1.00 38.38 C
ATOM 22 N2 G B 9 57.411 -28.182 20.858 1.00 37.22 N
ATOM 23 N3 G B 9 57.904 -29.659 22.541 1.00 38.13 N
ATOM 24 C4 G B 9 57.910 -30.976 22.838 1.00 36.53 C
ATOM 25 P G B 10 55.472 -30.973 28.436 1.00 44.43 P
ATOM 26 OP1 G B 10 55.093 -30.354 29.727 1.00 44.36 O
ATOM 27 OP2 G B 10 55.043 -32.344 28.094 1.00 40.27 O
ATOM 28 O5' G B 10 55.054 -29.947 27.289 1.00 42.63 O
TER
ATOM 2 P A A 107 54.537 -29.832 9.651 1.00 56.76 P
ATOM 3 OP1 A A 107 54.614 -29.577 8.194 1.00 57.35 O
ATOM 4 OP2 A A 107 54.943 -31.146 10.196 1.00 54.38 O
ATOM 5 O5' A A 107 55.392 -28.712 10.405 1.00 56.96 O
ATOM 6 C5' A A 107 55.119 -27.328 10.245 1.00 55.11 C
ATOM 7 C4' A A 107 55.252 -26.627 11.580 1.00 53.59 C
ATOM 8 O4' A A 107 54.396 -27.262 12.566 1.00 52.90 O
ATOM 9 C3' A A 107 56.630 -26.699 12.216 1.00 52.01 C
ATOM 10 O3' A A 107 57.534 -25.769 11.626 1.00 50.21 O
ATOM 11 C2' A A 107 56.289 -26.361 13.661 1.00 51.45 C
ATOM 12 O2' A A 107 56.093 -24.980 13.899 1.00 52.83 O
ATOM 13 C1' A A 107 54.998 -27.148 13.845 1.00 48.02 C
ATOM 14 N9 A A 107 55.242 -28.476 14.398 1.00 45.46 N
ATOM 15 C8 A A 107 55.331 -29.671 13.733 1.00 44.74 C
ATOM 16 N7 A A 107 55.559 -30.703 14.513 1.00 45.19 N
ATOM 17 C5 A A 107 55.641 -30.138 15.773 1.00 43.85 C
ATOM 18 C6 A A 107 55.875 -30.690 17.043 1.00 44.92 C
ATOM 19 N6 A A 107 56.077 -31.991 17.256 1.00 43.63 N
ATOM 20 N1 A A 107 55.887 -29.845 18.090 1.00 43.24 N
ATOM 21 C2 A A 107 55.688 -28.538 17.888 1.00 44.74 C
ATOM 22 N3 A A 107 55.459 -27.898 16.748 1.00 42.11 N
ATOM 23 C4 A A 107 55.449 -28.766 15.722 1.00 45.36 C
ATOM 24 P C A 108 59.097 -26.093 11.586 1.00 50.11 P
ATOM 25 OP1 C A 108 59.788 -24.966 10.919 1.00 49.37 O
ATOM 26 OP2 C A 108 59.284 -27.483 11.125 1.00 47.53 O
ATOM 27 O5' C A 108 59.494 -26.031 13.128 1.00 47.71 O
TER
ATOM 1 O3' G B 8 60.813 -35.524 26.742 1.00 37.65 O
ATOM 2 P G B 9 59.273 -35.508 27.146 1.00 38.68 P
ATOM 3 OP1 G B 9 59.218 -35.866 28.575 1.00 42.47 O
ATOM 4 OP2 G B 9 58.470 -36.243 26.149 1.00 41.85 O
ATOM 5 O5' G B 9 58.881 -33.975 26.972 1.00 37.17 O
ATOM 6 C5' G B 9 59.450 -32.981 27.817 1.00 39.31 C
ATOM 7 C4' G B 9 59.130 -31.607 27.272 1.00 39.36 C
ATOM 8 O4' G B 9 59.640 -31.518 25.926 1.00 37.81 O
ATOM 9 C3' G B 9 57.659 -31.296 27.094 1.00 36.71 C
ATOM 10 O3' G B 9 57.062 -30.940 28.327 1.00 41.54 O
ATOM 11 C2' G B 9 57.712 -30.167 26.076 1.00 37.74 C
ATOM 12 O2' G B 9 58.110 -28.916 26.578 1.00 37.01 O
ATOM 13 C1' G B 9 58.792 -30.704 25.154 1.00 37.80 C
ATOM 14 N9 G B 9 58.295 -31.499 24.042 1.00 37.50 N
ATOM 15 C8 G B 9 58.140 -32.864 23.933 1.00 36.82 C
ATOM 16 N7 G B 9 57.687 -33.237 22.753 1.00 35.91 N
ATOM 17 C5 G B 9 57.533 -32.045 22.060 1.00 33.56 C
ATOM 18 C6 G B 9 57.073 -31.786 20.749 1.00 36.43 C
ATOM 19 O6 G B 9 56.700 -32.594 19.894 1.00 37.29 O
ATOM 20 N1 G B 9 57.082 -30.431 20.440 1.00 37.01 N
ATOM 21 C2 G B 9 57.466 -29.438 21.314 1.00 38.38 C
ATOM 22 N2 G B 9 57.411 -28.182 20.858 1.00 37.22 N
ATOM 23 N3 G B 9 57.904 -29.659 22.541 1.00 38.13 N
ATOM 24 C4 G B 9 57.910 -30.976 22.838 1.00 36.53 C
ATOM 25 P G B 10 55.472 -30.973 28.436 1.00 44.43 P
ATOM 26 OP1 G B 10 55.093 -30.354 29.727 1.00 44.36 O
ATOM 27 OP2 G B 10 55.043 -32.344 28.094 1.00 40.27 O
ATOM 28 O5' G B 10 55.054 -29.947 27.289 1.00 42.63 O
TER
Atoms:
OP1: (54.614,-29.577,8.194)
OP2: (54.943,-31.146,10.196)
C3': (56.630,-26.699,12.216)
C1': (54.998,-27.148,13.845)
C5': (55.119,-27.328,10.245)
O4': (54.396,-27.262,12.566)
C8: (55.331,-29.671,13.733)
O2': (56.093,-24.980,13.899)
C6: (55.875,-30.690,17.043)
C5: (55.641,-30.138,15.773)
C4: (55.449,-28.766,15.722)
P: (54.537,-29.832,9.651)
C4': (55.252,-26.627,11.580)
C2': (56.289,-26.361,13.661)
C2: (55.688,-28.538,17.888)
N1: (55.887,-29.845,18.090)
N3: (55.459,-27.898,16.748)
N6: (56.077,-31.991,17.256)
N7: (55.559,-30.703,14.513)
N9: (55.242,-28.476,14.398)
O5': (55.392,-28.712,10.405)
O3': (57.534,-25.769,11.626)
OP2: (54.943,-31.146,10.196)
C3': (56.630,-26.699,12.216)
C1': (54.998,-27.148,13.845)
C5': (55.119,-27.328,10.245)
O4': (54.396,-27.262,12.566)
C8: (55.331,-29.671,13.733)
O2': (56.093,-24.980,13.899)
C6: (55.875,-30.690,17.043)
C5: (55.641,-30.138,15.773)
C4: (55.449,-28.766,15.722)
P: (54.537,-29.832,9.651)
C4': (55.252,-26.627,11.580)
C2': (56.289,-26.361,13.661)
C2: (55.688,-28.538,17.888)
N1: (55.887,-29.845,18.090)
N3: (55.459,-27.898,16.748)
N6: (56.077,-31.991,17.256)
N7: (55.559,-30.703,14.513)
N9: (55.242,-28.476,14.398)
O5': (55.392,-28.712,10.405)
O3': (57.534,-25.769,11.626)
OP1: (59.218,-35.866,28.575)
OP2: (58.470,-36.243,26.149)
C3': (57.659,-31.296,27.094)
C1': (58.792,-30.704,25.154)
C5': (59.450,-32.981,27.817)
O6: (56.700,-32.594,19.894)
O4': (59.640,-31.518,25.926)
C8: (58.140,-32.864,23.933)
C2: (57.466,-29.438,21.314)
C6: (57.073,-31.786,20.749)
C5: (57.533,-32.045,22.060)
C4: (57.910,-30.976,22.838)
P: (59.273,-35.508,27.146)
C4': (59.130,-31.607,27.272)
C2': (57.712,-30.167,26.076)
O2': (58.110,-28.916,26.578)
N1: (57.082,-30.431,20.440)
N2: (57.411,-28.182,20.858)
N3: (57.904,-29.659,22.541)
N7: (57.687,-33.237,22.753)
N9: (58.295,-31.499,24.042)
O5': (58.881,-33.975,26.972)
O3': (57.062,-30.940,28.327)
OP2: (58.470,-36.243,26.149)
C3': (57.659,-31.296,27.094)
C1': (58.792,-30.704,25.154)
C5': (59.450,-32.981,27.817)
O6: (56.700,-32.594,19.894)
O4': (59.640,-31.518,25.926)
C8: (58.140,-32.864,23.933)
C2: (57.466,-29.438,21.314)
C6: (57.073,-31.786,20.749)
C5: (57.533,-32.045,22.060)
C4: (57.910,-30.976,22.838)
P: (59.273,-35.508,27.146)
C4': (59.130,-31.607,27.272)
C2': (57.712,-30.167,26.076)
O2': (58.110,-28.916,26.578)
N1: (57.082,-30.431,20.440)
N2: (57.411,-28.182,20.858)
N3: (57.904,-29.659,22.541)
N7: (57.687,-33.237,22.753)
N9: (58.295,-31.499,24.042)
O5': (58.881,-33.975,26.972)
O3': (57.062,-30.940,28.327)
Image (generated by PyMOL):