Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52040:52027
Extra
PDB:
ATOM 1 O3' A A2039 178.699 -57.898 211.181 1.00 76.56 O
ATOM 2 P A A2040 179.818 -56.767 211.002 1.00 69.86 P
ATOM 3 OP1 A A2040 180.405 -56.475 212.353 1.00 69.49 O
ATOM 4 OP2 A A2040 179.197 -55.644 210.251 1.00 69.59 O
ATOM 5 O5' A A2040 180.876 -57.536 210.092 1.00 70.51 O
ATOM 6 C5' A A2040 182.029 -56.897 209.602 1.00 70.59 C
ATOM 7 C4' A A2040 182.271 -57.281 208.179 1.00 71.14 C
ATOM 8 O4' A A2040 181.033 -57.738 207.591 1.00 71.29 O
ATOM 9 C3' A A2040 182.695 -56.155 207.271 1.00 71.07 C
ATOM 10 O3' A A2040 184.059 -55.825 207.394 1.00 71.13 O
ATOM 11 C2' A A2040 182.283 -56.667 205.902 1.00 71.58 C
ATOM 12 O2' A A2040 183.162 -57.682 205.462 1.00 72.19 O
ATOM 13 C1' A A2040 180.961 -57.318 206.249 1.00 71.52 C
ATOM 14 N9 A A2040 179.843 -56.386 206.129 1.00 71.07 N
ATOM 15 C8 A A2040 179.070 -55.870 207.128 1.00 70.50 C
ATOM 16 N7 A A2040 178.118 -55.091 206.670 1.00 70.24 N
ATOM 17 C5 A A2040 178.287 -55.128 205.288 1.00 70.68 C
ATOM 18 C6 A A2040 177.611 -54.534 204.219 1.00 70.70 C
ATOM 19 N6 A A2040 176.561 -53.731 204.358 1.00 70.26 N
ATOM 20 N1 A A2040 178.057 -54.785 202.976 1.00 71.22 N
ATOM 21 C2 A A2040 179.098 -55.580 202.825 1.00 71.68 C
ATOM 22 N3 A A2040 179.811 -56.193 203.745 1.00 71.70 N
ATOM 23 C4 A A2040 179.348 -55.922 204.955 1.00 71.19 C
ATOM 24 P C A2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 25 OP1 C A2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 26 OP2 C A2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 27 O5' C A2041 184.582 -53.606 206.423 1.00 75.77 O
TER
ATOM 1 O3' A B2026 171.072 -51.170 194.440 1.00 60.32 O
ATOM 2 P G B2027 171.087 -52.767 194.613 1.00 62.84 P
ATOM 3 OP1 G B2027 170.513 -53.350 193.366 1.00 63.42 O
ATOM 4 OP2 G B2027 170.430 -53.086 195.914 1.00 62.43 O
ATOM 5 O5' G B2027 172.648 -53.082 194.674 1.00 63.08 O
ATOM 6 C5' G B2027 173.449 -52.898 193.516 1.00 63.52 C
ATOM 7 C4' G B2027 174.912 -53.035 193.817 1.00 63.62 C
ATOM 8 O4' G B2027 175.330 -52.010 194.753 1.00 63.01 O
ATOM 9 C3' G B2027 175.348 -54.329 194.489 1.00 63.87 C
ATOM 10 O3' G B2027 175.442 -55.411 193.589 1.00 64.57 O
ATOM 11 C2' G B2027 176.684 -53.934 195.070 1.00 63.70 C
ATOM 12 O2' G B2027 177.652 -53.859 194.039 1.00 64.16 O
ATOM 13 C1' G B2027 176.372 -52.517 195.566 1.00 63.02 C
ATOM 14 N9 G B2027 175.894 -52.549 196.946 1.00 62.50 N
ATOM 15 C8 G B2027 174.594 -52.434 197.354 1.00 62.17 C
ATOM 16 N7 G B2027 174.464 -52.551 198.649 1.00 61.76 N
ATOM 17 C5 G B2027 175.756 -52.790 199.102 1.00 61.84 C
ATOM 18 C6 G B2027 176.245 -53.016 200.411 1.00 61.56 C
ATOM 19 O6 G B2027 175.648 -53.048 201.490 1.00 61.15 O
ATOM 20 N1 G B2027 177.609 -53.211 200.426 1.00 61.78 N
ATOM 21 C2 G B2027 178.411 -53.198 199.324 1.00 62.24 C
ATOM 22 N2 G B2027 179.714 -53.404 199.592 1.00 62.40 N
ATOM 23 N3 G B2027 177.975 -52.985 198.085 1.00 62.52 N
ATOM 24 C4 G B2027 176.643 -52.795 198.056 1.00 62.30 C
ATOM 25 P U B2028 175.006 -56.881 194.037 1.00 70.62 P
ATOM 26 OP1 U B2028 175.084 -57.737 192.823 1.00 71.36 O
ATOM 27 OP2 U B2028 173.707 -56.753 194.748 1.00 70.17 O
ATOM 28 O5' U B2028 176.147 -57.294 195.065 1.00 70.54 O
TER
ATOM 2 P A A2040 179.818 -56.767 211.002 1.00 69.86 P
ATOM 3 OP1 A A2040 180.405 -56.475 212.353 1.00 69.49 O
ATOM 4 OP2 A A2040 179.197 -55.644 210.251 1.00 69.59 O
ATOM 5 O5' A A2040 180.876 -57.536 210.092 1.00 70.51 O
ATOM 6 C5' A A2040 182.029 -56.897 209.602 1.00 70.59 C
ATOM 7 C4' A A2040 182.271 -57.281 208.179 1.00 71.14 C
ATOM 8 O4' A A2040 181.033 -57.738 207.591 1.00 71.29 O
ATOM 9 C3' A A2040 182.695 -56.155 207.271 1.00 71.07 C
ATOM 10 O3' A A2040 184.059 -55.825 207.394 1.00 71.13 O
ATOM 11 C2' A A2040 182.283 -56.667 205.902 1.00 71.58 C
ATOM 12 O2' A A2040 183.162 -57.682 205.462 1.00 72.19 O
ATOM 13 C1' A A2040 180.961 -57.318 206.249 1.00 71.52 C
ATOM 14 N9 A A2040 179.843 -56.386 206.129 1.00 71.07 N
ATOM 15 C8 A A2040 179.070 -55.870 207.128 1.00 70.50 C
ATOM 16 N7 A A2040 178.118 -55.091 206.670 1.00 70.24 N
ATOM 17 C5 A A2040 178.287 -55.128 205.288 1.00 70.68 C
ATOM 18 C6 A A2040 177.611 -54.534 204.219 1.00 70.70 C
ATOM 19 N6 A A2040 176.561 -53.731 204.358 1.00 70.26 N
ATOM 20 N1 A A2040 178.057 -54.785 202.976 1.00 71.22 N
ATOM 21 C2 A A2040 179.098 -55.580 202.825 1.00 71.68 C
ATOM 22 N3 A A2040 179.811 -56.193 203.745 1.00 71.70 N
ATOM 23 C4 A A2040 179.348 -55.922 204.955 1.00 71.19 C
ATOM 24 P C A2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 25 OP1 C A2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 26 OP2 C A2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 27 O5' C A2041 184.582 -53.606 206.423 1.00 75.77 O
TER
ATOM 1 O3' A B2026 171.072 -51.170 194.440 1.00 60.32 O
ATOM 2 P G B2027 171.087 -52.767 194.613 1.00 62.84 P
ATOM 3 OP1 G B2027 170.513 -53.350 193.366 1.00 63.42 O
ATOM 4 OP2 G B2027 170.430 -53.086 195.914 1.00 62.43 O
ATOM 5 O5' G B2027 172.648 -53.082 194.674 1.00 63.08 O
ATOM 6 C5' G B2027 173.449 -52.898 193.516 1.00 63.52 C
ATOM 7 C4' G B2027 174.912 -53.035 193.817 1.00 63.62 C
ATOM 8 O4' G B2027 175.330 -52.010 194.753 1.00 63.01 O
ATOM 9 C3' G B2027 175.348 -54.329 194.489 1.00 63.87 C
ATOM 10 O3' G B2027 175.442 -55.411 193.589 1.00 64.57 O
ATOM 11 C2' G B2027 176.684 -53.934 195.070 1.00 63.70 C
ATOM 12 O2' G B2027 177.652 -53.859 194.039 1.00 64.16 O
ATOM 13 C1' G B2027 176.372 -52.517 195.566 1.00 63.02 C
ATOM 14 N9 G B2027 175.894 -52.549 196.946 1.00 62.50 N
ATOM 15 C8 G B2027 174.594 -52.434 197.354 1.00 62.17 C
ATOM 16 N7 G B2027 174.464 -52.551 198.649 1.00 61.76 N
ATOM 17 C5 G B2027 175.756 -52.790 199.102 1.00 61.84 C
ATOM 18 C6 G B2027 176.245 -53.016 200.411 1.00 61.56 C
ATOM 19 O6 G B2027 175.648 -53.048 201.490 1.00 61.15 O
ATOM 20 N1 G B2027 177.609 -53.211 200.426 1.00 61.78 N
ATOM 21 C2 G B2027 178.411 -53.198 199.324 1.00 62.24 C
ATOM 22 N2 G B2027 179.714 -53.404 199.592 1.00 62.40 N
ATOM 23 N3 G B2027 177.975 -52.985 198.085 1.00 62.52 N
ATOM 24 C4 G B2027 176.643 -52.795 198.056 1.00 62.30 C
ATOM 25 P U B2028 175.006 -56.881 194.037 1.00 70.62 P
ATOM 26 OP1 U B2028 175.084 -57.737 192.823 1.00 71.36 O
ATOM 27 OP2 U B2028 173.707 -56.753 194.748 1.00 70.17 O
ATOM 28 O5' U B2028 176.147 -57.294 195.065 1.00 70.54 O
TER
Atoms:
OP1: (180.405,-56.475,212.353)
OP2: (179.197,-55.644,210.251)
C3': (182.695,-56.155,207.271)
C1': (180.961,-57.318,206.249)
C5': (182.029,-56.897,209.602)
O4': (181.033,-57.738,207.591)
C8: (179.070,-55.870,207.128)
O2': (183.162,-57.682,205.462)
C6: (177.611,-54.534,204.219)
C5: (178.287,-55.128,205.288)
C4: (179.348,-55.922,204.955)
P: (179.818,-56.767,211.002)
C4': (182.271,-57.281,208.179)
C2': (182.283,-56.667,205.902)
C2: (179.098,-55.580,202.825)
N1: (178.057,-54.785,202.976)
N3: (179.811,-56.193,203.745)
N6: (176.561,-53.731,204.358)
N7: (178.118,-55.091,206.670)
N9: (179.843,-56.386,206.129)
O5': (180.876,-57.536,210.092)
O3': (184.059,-55.825,207.394)
OP2: (179.197,-55.644,210.251)
C3': (182.695,-56.155,207.271)
C1': (180.961,-57.318,206.249)
C5': (182.029,-56.897,209.602)
O4': (181.033,-57.738,207.591)
C8: (179.070,-55.870,207.128)
O2': (183.162,-57.682,205.462)
C6: (177.611,-54.534,204.219)
C5: (178.287,-55.128,205.288)
C4: (179.348,-55.922,204.955)
P: (179.818,-56.767,211.002)
C4': (182.271,-57.281,208.179)
C2': (182.283,-56.667,205.902)
C2: (179.098,-55.580,202.825)
N1: (178.057,-54.785,202.976)
N3: (179.811,-56.193,203.745)
N6: (176.561,-53.731,204.358)
N7: (178.118,-55.091,206.670)
N9: (179.843,-56.386,206.129)
O5': (180.876,-57.536,210.092)
O3': (184.059,-55.825,207.394)
OP1: (170.513,-53.350,193.366)
OP2: (170.430,-53.086,195.914)
C3': (175.348,-54.329,194.489)
C1': (176.372,-52.517,195.566)
C5': (173.449,-52.898,193.516)
O6: (175.648,-53.048,201.490)
O4': (175.330,-52.010,194.753)
C8: (174.594,-52.434,197.354)
C2: (178.411,-53.198,199.324)
C6: (176.245,-53.016,200.411)
C5: (175.756,-52.790,199.102)
C4: (176.643,-52.795,198.056)
P: (171.087,-52.767,194.613)
C4': (174.912,-53.035,193.817)
C2': (176.684,-53.934,195.070)
O2': (177.652,-53.859,194.039)
N1: (177.609,-53.211,200.426)
N2: (179.714,-53.404,199.592)
N3: (177.975,-52.985,198.085)
N7: (174.464,-52.551,198.649)
N9: (175.894,-52.549,196.946)
O5': (172.648,-53.082,194.674)
O3': (175.442,-55.411,193.589)
OP2: (170.430,-53.086,195.914)
C3': (175.348,-54.329,194.489)
C1': (176.372,-52.517,195.566)
C5': (173.449,-52.898,193.516)
O6: (175.648,-53.048,201.490)
O4': (175.330,-52.010,194.753)
C8: (174.594,-52.434,197.354)
C2: (178.411,-53.198,199.324)
C6: (176.245,-53.016,200.411)
C5: (175.756,-52.790,199.102)
C4: (176.643,-52.795,198.056)
P: (171.087,-52.767,194.613)
C4': (174.912,-53.035,193.817)
C2': (176.684,-53.934,195.070)
O2': (177.652,-53.859,194.039)
N1: (177.609,-53.211,200.426)
N2: (179.714,-53.404,199.592)
N3: (177.975,-52.985,198.085)
N7: (174.464,-52.551,198.649)
N9: (175.894,-52.549,196.946)
O5': (172.648,-53.082,194.674)
O3': (175.442,-55.411,193.589)
Image (generated by PyMOL):