ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:496:462

Extra

PDB:
ATOM 1 O3' A A 95 73.345 0.500 141.922 1.00 56.99 O
ATOM 2 P A A 96 71.763 0.555 141.786 1.00 59.26 P
ATOM 3 OP1 A A 96 71.221 -0.152 142.970 1.00 59.77 O
ATOM 4 OP2 A A 96 71.417 0.071 140.415 1.00 58.22 O
ATOM 5 O5' A A 96 71.441 2.100 141.895 1.00 59.54 O
ATOM 6 C5' A A 96 70.627 2.735 140.930 1.00 58.85 C
ATOM 7 C4' A A 96 70.886 4.211 140.903 1.00 59.20 C
ATOM 8 O4' A A 96 71.998 4.493 140.018 1.00 58.97 O
ATOM 9 C3' A A 96 69.751 5.080 140.394 1.00 58.80 C
ATOM 10 O3' A A 96 68.797 5.383 141.407 1.00 59.31 O
ATOM 11 C2' A A 96 70.471 6.308 139.878 1.00 58.91 C
ATOM 12 O2' A A 96 70.722 7.195 140.938 1.00 59.87 O
ATOM 13 C1' A A 96 71.807 5.733 139.382 1.00 58.79 C
ATOM 14 N9 A A 96 71.799 5.517 137.919 1.00 57.82 N
ATOM 15 C8 A A 96 71.767 4.337 137.229 1.00 57.14 C
ATOM 16 N7 A A 96 71.725 4.441 135.921 1.00 56.36 N
ATOM 17 C5 A A 96 71.702 5.801 135.728 1.00 56.52 C
ATOM 18 C6 A A 96 71.647 6.569 134.567 1.00 55.98 C
ATOM 19 N6 A A 96 71.620 6.068 133.369 1.00 55.17 N
ATOM 20 N1 A A 96 71.650 7.901 134.689 1.00 56.36 N
ATOM 21 C2 A A 96 71.695 8.429 135.927 1.00 57.24 C
ATOM 22 N3 A A 96 71.751 7.807 137.128 1.00 57.84 N
ATOM 23 C4 A A 96 71.753 6.474 136.946 1.00 57.42 C
ATOM 24 P U A 97 67.231 5.619 141.036 1.00 58.71 P
ATOM 25 OP1 U A 97 66.550 6.020 142.307 1.00 59.51 O
ATOM 26 OP2 U A 97 66.742 4.381 140.311 1.00 57.88 O
ATOM 27 O5' U A 97 67.281 6.870 140.022 1.00 58.36 O
TER

ATOM 1 O3' C B 61 75.986 15.095 124.475 1.00 56.88 O
ATOM 2 P G B 62 77.090 14.675 125.573 1.00 54.12 P
ATOM 3 OP1 G B 62 77.998 15.849 125.803 1.00 54.86 O
ATOM 4 OP2 G B 62 77.670 13.404 125.063 1.00 53.70 O
ATOM 5 O5' G B 62 76.206 14.387 126.879 1.00 54.46 O
ATOM 6 C5' G B 62 76.778 14.263 128.178 1.00 55.31 C
ATOM 7 C4' G B 62 75.745 14.523 129.249 1.00 55.67 C
ATOM 8 O4' G B 62 74.488 13.940 128.858 1.00 54.92 O
ATOM 9 C3' G B 62 75.997 13.910 130.612 1.00 56.34 C
ATOM 10 O3' G B 62 76.924 14.638 131.375 1.00 57.27 O
ATOM 11 C2' G B 62 74.611 13.918 131.218 1.00 56.29 C
ATOM 12 O2' G B 62 74.269 15.240 131.642 1.00 56.82 O
ATOM 13 C1' G B 62 73.760 13.555 130.004 1.00 55.25 C
ATOM 14 N9 G B 62 73.475 12.098 129.931 1.00 54.74 N
ATOM 15 C8 G B 62 73.865 11.152 128.989 1.00 54.09 C
ATOM 16 N7 G B 62 73.433 9.929 129.227 1.00 53.80 N
ATOM 17 C5 G B 62 72.697 10.068 130.408 1.00 54.29 C
ATOM 18 C6 G B 62 71.970 9.129 131.210 1.00 54.33 C
ATOM 19 O6 G B 62 71.804 7.935 131.086 1.00 53.95 O
ATOM 20 N1 G B 62 71.384 9.703 132.311 1.00 54.95 N
ATOM 21 C2 G B 62 71.478 11.019 132.645 1.00 55.50 C
ATOM 22 N2 G B 62 70.840 11.364 133.771 1.00 56.09 N
ATOM 23 N3 G B 62 72.130 11.918 131.942 1.00 55.49 N
ATOM 24 C4 G B 62 72.717 11.393 130.847 1.00 54.88 C
ATOM 25 P U B 63 78.068 13.889 132.218 1.00 60.93 P
ATOM 26 OP1 U B 63 79.062 14.924 132.558 1.00 61.76 O
ATOM 27 OP2 U B 63 78.514 12.706 131.425 1.00 60.29 O
ATOM 28 O5' U B 63 77.321 13.411 133.548 1.00 61.35 O
TER

Atoms:
OP1: (71.221,-0.152,142.970)
OP2: (71.417,0.071,140.415)
C3': (69.751,5.080,140.394)
C1': (71.807,5.733,139.382)
C5': (70.627,2.735,140.930)
O4': (71.998,4.493,140.018)
C8: (71.767,4.337,137.229)
O2': (70.722,7.195,140.938)
C6: (71.647,6.569,134.567)
C5: (71.702,5.801,135.728)
C4: (71.753,6.474,136.946)
P: (71.763,0.555,141.786)
C4': (70.886,4.211,140.903)
C2': (70.471,6.308,139.878)
C2: (71.695,8.429,135.927)
N1: (71.650,7.901,134.689)
N3: (71.751,7.807,137.128)
N6: (71.620,6.068,133.369)
N7: (71.725,4.441,135.921)
N9: (71.799,5.517,137.919)
O5': (71.441,2.100,141.895)
O3': (68.797,5.383,141.407)
OP1: (77.998,15.849,125.803)
OP2: (77.670,13.404,125.063)
C3': (75.997,13.910,130.612)
C1': (73.760,13.555,130.004)
C5': (76.778,14.263,128.178)
O6: (71.804,7.935,131.086)
O4': (74.488,13.940,128.858)
C8: (73.865,11.152,128.989)
C2: (71.478,11.019,132.645)
C6: (71.970,9.129,131.210)
C5: (72.697,10.068,130.408)
C4: (72.717,11.393,130.847)
P: (77.090,14.675,125.573)
C4': (75.745,14.523,129.249)
C2': (74.611,13.918,131.218)
O2': (74.269,15.240,131.642)
N1: (71.384,9.703,132.311)
N2: (70.840,11.364,133.771)
N3: (72.130,11.918,131.942)
N7: (73.433,9.929,129.227)
N9: (73.475,12.098,129.931)
O5': (76.206,14.387,126.879)
O3': (76.924,14.638,131.375)
Image (generated by PyMOL):
PyMOL image
show in jmol