Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02640:02612
Extra
PDB:
ATOM 1 O3' A A2639 54.300 131.815 143.780 1.00 48.92 O
ATOM 2 P A A2640 52.761 131.429 143.493 1.00 52.03 P
ATOM 3 OP1 A A2640 52.281 132.331 142.414 1.00 53.08 O
ATOM 4 OP2 A A2640 52.030 131.388 144.788 1.00 54.58 O
ATOM 5 O5' A A2640 52.797 129.939 142.926 1.00 51.11 O
ATOM 6 C5' A A2640 53.271 129.645 141.598 1.00 49.82 C
ATOM 7 C4' A A2640 52.871 128.242 141.212 1.00 49.85 C
ATOM 8 O4' A A2640 53.388 127.314 142.202 1.00 50.52 O
ATOM 9 C3' A A2640 51.372 127.991 141.173 1.00 49.28 C
ATOM 10 O3' A A2640 50.871 128.266 139.874 1.00 49.64 O
ATOM 11 C2' A A2640 51.283 126.508 141.503 1.00 50.48 C
ATOM 12 O2' A A2640 51.615 125.691 140.396 1.00 51.12 O
ATOM 13 C1' A A2640 52.390 126.372 142.551 1.00 50.63 C
ATOM 14 N9 A A2640 51.970 126.658 143.928 1.00 52.11 N
ATOM 15 C8 A A2640 52.676 127.377 144.864 1.00 52.66 C
ATOM 16 N7 A A2640 52.056 127.504 146.011 1.00 53.50 N
ATOM 17 C5 A A2640 50.864 126.820 145.824 1.00 52.28 C
ATOM 18 C6 A A2640 49.767 126.600 146.664 1.00 52.91 C
ATOM 19 N6 A A2640 49.686 127.076 147.907 1.00 54.21 N
ATOM 20 N1 A A2640 48.738 125.873 146.179 1.00 52.28 N
ATOM 21 C2 A A2640 48.817 125.413 144.930 1.00 51.58 C
ATOM 22 N3 A A2640 49.791 125.562 144.037 1.00 52.58 N
ATOM 23 C4 A A2640 50.800 126.285 144.551 1.00 51.81 C
ATOM 24 P C A2641 49.784 129.425 139.657 1.00 52.60 P
ATOM 25 OP1 C A2641 49.677 129.626 138.187 1.00 52.19 O
ATOM 26 OP2 C A2641 50.103 130.588 140.539 1.00 52.32 O
ATOM 27 O5' C A2641 48.424 128.773 140.158 1.00 50.69 O
TER
ATOM 1 O3' G B2611 39.287 128.029 153.358 1.00 65.85 O
ATOM 2 P G B2612 39.938 126.686 153.948 1.00 64.89 P
ATOM 3 OP1 G B2612 38.898 126.036 154.786 1.00 65.91 O
ATOM 4 OP2 G B2612 41.263 127.012 154.540 1.00 64.10 O
ATOM 5 O5' G B2612 40.173 125.800 152.646 1.00 62.14 O
ATOM 6 C5' G B2612 39.126 125.647 151.672 1.00 56.10 C
ATOM 7 C4' G B2612 39.675 125.078 150.389 1.00 53.70 C
ATOM 8 O4' G B2612 40.508 126.054 149.702 1.00 55.00 O
ATOM 9 C3' G B2612 40.596 123.884 150.532 1.00 52.46 C
ATOM 10 O3' G B2612 39.889 122.682 150.810 1.00 50.10 O
ATOM 11 C2' G B2612 41.298 123.875 149.178 1.00 52.34 C
ATOM 12 O2' G B2612 40.498 123.318 148.153 1.00 51.13 O
ATOM 13 C1' G B2612 41.500 125.375 148.935 1.00 52.77 C
ATOM 14 N9 G B2612 42.825 125.829 149.357 1.00 52.43 N
ATOM 15 C8 G B2612 43.164 126.425 150.550 1.00 52.45 C
ATOM 16 N7 G B2612 44.442 126.677 150.653 1.00 51.87 N
ATOM 17 C5 G B2612 44.978 126.232 149.452 1.00 52.52 C
ATOM 18 C6 G B2612 46.318 126.238 148.985 1.00 53.28 C
ATOM 19 O6 G B2612 47.334 126.644 149.559 1.00 53.76 O
ATOM 20 N1 G B2612 46.417 125.701 147.711 1.00 52.73 N
ATOM 21 C2 G B2612 45.369 125.219 146.976 1.00 53.22 C
ATOM 22 N2 G B2612 45.677 124.752 145.761 1.00 54.98 N
ATOM 23 N3 G B2612 44.116 125.200 147.397 1.00 53.02 N
ATOM 24 C4 G B2612 43.994 125.717 148.636 1.00 52.48 C
ATOM 25 P U B2613 40.707 121.369 151.246 1.00 49.94 P
ATOM 26 OP1 U B2613 39.750 120.234 151.333 1.00 49.80 O
ATOM 27 OP2 U B2613 41.561 121.710 152.420 1.00 48.52 O
ATOM 28 O5' U B2613 41.658 121.114 149.996 1.00 49.06 O
TER
ATOM 2 P A A2640 52.761 131.429 143.493 1.00 52.03 P
ATOM 3 OP1 A A2640 52.281 132.331 142.414 1.00 53.08 O
ATOM 4 OP2 A A2640 52.030 131.388 144.788 1.00 54.58 O
ATOM 5 O5' A A2640 52.797 129.939 142.926 1.00 51.11 O
ATOM 6 C5' A A2640 53.271 129.645 141.598 1.00 49.82 C
ATOM 7 C4' A A2640 52.871 128.242 141.212 1.00 49.85 C
ATOM 8 O4' A A2640 53.388 127.314 142.202 1.00 50.52 O
ATOM 9 C3' A A2640 51.372 127.991 141.173 1.00 49.28 C
ATOM 10 O3' A A2640 50.871 128.266 139.874 1.00 49.64 O
ATOM 11 C2' A A2640 51.283 126.508 141.503 1.00 50.48 C
ATOM 12 O2' A A2640 51.615 125.691 140.396 1.00 51.12 O
ATOM 13 C1' A A2640 52.390 126.372 142.551 1.00 50.63 C
ATOM 14 N9 A A2640 51.970 126.658 143.928 1.00 52.11 N
ATOM 15 C8 A A2640 52.676 127.377 144.864 1.00 52.66 C
ATOM 16 N7 A A2640 52.056 127.504 146.011 1.00 53.50 N
ATOM 17 C5 A A2640 50.864 126.820 145.824 1.00 52.28 C
ATOM 18 C6 A A2640 49.767 126.600 146.664 1.00 52.91 C
ATOM 19 N6 A A2640 49.686 127.076 147.907 1.00 54.21 N
ATOM 20 N1 A A2640 48.738 125.873 146.179 1.00 52.28 N
ATOM 21 C2 A A2640 48.817 125.413 144.930 1.00 51.58 C
ATOM 22 N3 A A2640 49.791 125.562 144.037 1.00 52.58 N
ATOM 23 C4 A A2640 50.800 126.285 144.551 1.00 51.81 C
ATOM 24 P C A2641 49.784 129.425 139.657 1.00 52.60 P
ATOM 25 OP1 C A2641 49.677 129.626 138.187 1.00 52.19 O
ATOM 26 OP2 C A2641 50.103 130.588 140.539 1.00 52.32 O
ATOM 27 O5' C A2641 48.424 128.773 140.158 1.00 50.69 O
TER
ATOM 1 O3' G B2611 39.287 128.029 153.358 1.00 65.85 O
ATOM 2 P G B2612 39.938 126.686 153.948 1.00 64.89 P
ATOM 3 OP1 G B2612 38.898 126.036 154.786 1.00 65.91 O
ATOM 4 OP2 G B2612 41.263 127.012 154.540 1.00 64.10 O
ATOM 5 O5' G B2612 40.173 125.800 152.646 1.00 62.14 O
ATOM 6 C5' G B2612 39.126 125.647 151.672 1.00 56.10 C
ATOM 7 C4' G B2612 39.675 125.078 150.389 1.00 53.70 C
ATOM 8 O4' G B2612 40.508 126.054 149.702 1.00 55.00 O
ATOM 9 C3' G B2612 40.596 123.884 150.532 1.00 52.46 C
ATOM 10 O3' G B2612 39.889 122.682 150.810 1.00 50.10 O
ATOM 11 C2' G B2612 41.298 123.875 149.178 1.00 52.34 C
ATOM 12 O2' G B2612 40.498 123.318 148.153 1.00 51.13 O
ATOM 13 C1' G B2612 41.500 125.375 148.935 1.00 52.77 C
ATOM 14 N9 G B2612 42.825 125.829 149.357 1.00 52.43 N
ATOM 15 C8 G B2612 43.164 126.425 150.550 1.00 52.45 C
ATOM 16 N7 G B2612 44.442 126.677 150.653 1.00 51.87 N
ATOM 17 C5 G B2612 44.978 126.232 149.452 1.00 52.52 C
ATOM 18 C6 G B2612 46.318 126.238 148.985 1.00 53.28 C
ATOM 19 O6 G B2612 47.334 126.644 149.559 1.00 53.76 O
ATOM 20 N1 G B2612 46.417 125.701 147.711 1.00 52.73 N
ATOM 21 C2 G B2612 45.369 125.219 146.976 1.00 53.22 C
ATOM 22 N2 G B2612 45.677 124.752 145.761 1.00 54.98 N
ATOM 23 N3 G B2612 44.116 125.200 147.397 1.00 53.02 N
ATOM 24 C4 G B2612 43.994 125.717 148.636 1.00 52.48 C
ATOM 25 P U B2613 40.707 121.369 151.246 1.00 49.94 P
ATOM 26 OP1 U B2613 39.750 120.234 151.333 1.00 49.80 O
ATOM 27 OP2 U B2613 41.561 121.710 152.420 1.00 48.52 O
ATOM 28 O5' U B2613 41.658 121.114 149.996 1.00 49.06 O
TER
Atoms:
OP1: (52.281,132.331,142.414)
OP2: (52.030,131.388,144.788)
C3': (51.372,127.991,141.173)
C1': (52.390,126.372,142.551)
C5': (53.271,129.645,141.598)
O4': (53.388,127.314,142.202)
C8: (52.676,127.377,144.864)
O2': (51.615,125.691,140.396)
C6: (49.767,126.600,146.664)
C5: (50.864,126.820,145.824)
C4: (50.800,126.285,144.551)
P: (52.761,131.429,143.493)
C4': (52.871,128.242,141.212)
C2': (51.283,126.508,141.503)
C2: (48.817,125.413,144.930)
N1: (48.738,125.873,146.179)
N3: (49.791,125.562,144.037)
N6: (49.686,127.076,147.907)
N7: (52.056,127.504,146.011)
N9: (51.970,126.658,143.928)
O5': (52.797,129.939,142.926)
O3': (50.871,128.266,139.874)
OP2: (52.030,131.388,144.788)
C3': (51.372,127.991,141.173)
C1': (52.390,126.372,142.551)
C5': (53.271,129.645,141.598)
O4': (53.388,127.314,142.202)
C8: (52.676,127.377,144.864)
O2': (51.615,125.691,140.396)
C6: (49.767,126.600,146.664)
C5: (50.864,126.820,145.824)
C4: (50.800,126.285,144.551)
P: (52.761,131.429,143.493)
C4': (52.871,128.242,141.212)
C2': (51.283,126.508,141.503)
C2: (48.817,125.413,144.930)
N1: (48.738,125.873,146.179)
N3: (49.791,125.562,144.037)
N6: (49.686,127.076,147.907)
N7: (52.056,127.504,146.011)
N9: (51.970,126.658,143.928)
O5': (52.797,129.939,142.926)
O3': (50.871,128.266,139.874)
OP1: (38.898,126.036,154.786)
OP2: (41.263,127.012,154.540)
C3': (40.596,123.884,150.532)
C1': (41.500,125.375,148.935)
C5': (39.126,125.647,151.672)
O6: (47.334,126.644,149.559)
O4': (40.508,126.054,149.702)
C8: (43.164,126.425,150.550)
C2: (45.369,125.219,146.976)
C6: (46.318,126.238,148.985)
C5: (44.978,126.232,149.452)
C4: (43.994,125.717,148.636)
P: (39.938,126.686,153.948)
C4': (39.675,125.078,150.389)
C2': (41.298,123.875,149.178)
O2': (40.498,123.318,148.153)
N1: (46.417,125.701,147.711)
N2: (45.677,124.752,145.761)
N3: (44.116,125.200,147.397)
N7: (44.442,126.677,150.653)
N9: (42.825,125.829,149.357)
O5': (40.173,125.800,152.646)
O3': (39.889,122.682,150.810)
OP2: (41.263,127.012,154.540)
C3': (40.596,123.884,150.532)
C1': (41.500,125.375,148.935)
C5': (39.126,125.647,151.672)
O6: (47.334,126.644,149.559)
O4': (40.508,126.054,149.702)
C8: (43.164,126.425,150.550)
C2: (45.369,125.219,146.976)
C6: (46.318,126.238,148.985)
C5: (44.978,126.232,149.452)
C4: (43.994,125.717,148.636)
P: (39.938,126.686,153.948)
C4': (39.675,125.078,150.389)
C2': (41.298,123.875,149.178)
O2': (40.498,123.318,148.153)
N1: (46.417,125.701,147.711)
N2: (45.677,124.752,145.761)
N3: (44.116,125.200,147.397)
N7: (44.442,126.677,150.653)
N9: (42.825,125.829,149.357)
O5': (40.173,125.800,152.646)
O3': (39.889,122.682,150.810)
Image (generated by PyMOL):