Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A19:A65
Extra
PDB:
ATOM 1 O3' G A 18 10.402 11.278 4.704 1.00 37.21 O
ATOM 2 P A A 19 8.969 11.458 4.006 1.00 36.50 P
ATOM 3 OP1 A A 19 8.285 10.151 4.120 1.00 36.66 O
ATOM 4 OP2 A A 19 9.150 12.054 2.665 1.00 32.30 O
ATOM 5 O5' A A 19 8.240 12.508 4.972 1.00 32.23 O
ATOM 6 C5' A A 19 7.923 12.084 6.282 1.00 34.17 C
ATOM 7 C4' A A 19 7.442 13.219 7.167 1.00 36.00 C
ATOM 8 O4' A A 19 8.464 14.236 7.274 1.00 36.14 O
ATOM 9 C3' A A 19 6.222 13.973 6.671 1.00 37.62 C
ATOM 10 O3' A A 19 5.039 13.300 7.049 1.00 39.34 O
ATOM 11 C2' A A 19 6.353 15.262 7.464 1.00 38.44 C
ATOM 12 O2' A A 19 5.974 15.085 8.813 1.00 41.09 O
ATOM 13 C1' A A 19 7.851 15.509 7.364 1.00 37.49 C
ATOM 14 N9 A A 19 8.225 16.291 6.189 1.00 36.63 N
ATOM 15 C8 A A 19 8.774 15.807 5.039 1.00 36.24 C
ATOM 16 N7 A A 19 9.013 16.729 4.140 1.00 37.35 N
ATOM 17 C5 A A 19 8.593 17.898 4.744 1.00 36.30 C
ATOM 18 C6 A A 19 8.586 19.228 4.301 1.00 36.69 C
ATOM 19 N6 A A 19 9.039 19.582 3.096 1.00 38.13 N
ATOM 20 N1 A A 19 8.105 20.168 5.137 1.00 35.75 N
ATOM 21 C2 A A 19 7.661 19.785 6.337 1.00 37.22 C
ATOM 22 N3 A A 19 7.620 18.562 6.867 1.00 38.59 N
ATOM 23 C4 A A 19 8.105 17.652 6.008 1.00 36.76 C
ATOM 24 P U A 20 3.732 13.469 6.145 1.00 41.84 P
ATOM 25 OP1 U A 20 2.642 12.747 6.840 1.00 40.94 O
ATOM 26 OP2 U A 20 4.088 13.134 4.744 1.00 35.80 O
ATOM 27 O5' U A 20 3.430 15.043 6.210 1.00 41.53 O
TER
ATOM 1 O3' G B 64 10.478 30.258 0.550 1.00 40.42 O
ATOM 2 P G B 65 11.274 30.018 1.923 1.00 39.23 P
ATOM 3 OP1 G B 65 12.290 31.088 2.050 1.00 39.36 O
ATOM 4 OP2 G B 65 11.699 28.608 2.061 1.00 35.55 O
ATOM 5 O5' G B 65 10.106 30.261 2.976 1.00 36.94 O
ATOM 6 C5' G B 65 10.370 29.918 4.300 1.00 38.45 C
ATOM 7 C4' G B 65 9.099 29.549 5.018 1.00 39.04 C
ATOM 8 O4' G B 65 8.089 29.045 4.107 1.00 41.85 O
ATOM 9 C3' G B 65 9.334 28.394 5.956 1.00 41.25 C
ATOM 10 O3' G B 65 10.011 28.883 7.101 1.00 43.01 O
ATOM 11 C2' G B 65 7.891 27.951 6.162 1.00 41.58 C
ATOM 12 O2' G B 65 7.144 28.891 6.898 1.00 45.15 O
ATOM 13 C1' G B 65 7.445 27.930 4.701 1.00 40.76 C
ATOM 14 N9 G B 65 7.946 26.726 4.049 1.00 40.38 N
ATOM 15 C8 G B 65 8.810 26.649 2.982 1.00 40.78 C
ATOM 16 N7 G B 65 9.105 25.425 2.630 1.00 39.20 N
ATOM 17 C5 G B 65 8.397 24.648 3.532 1.00 38.25 C
ATOM 18 C6 G B 65 8.330 23.247 3.648 1.00 39.92 C
ATOM 19 O6 G B 65 8.908 22.409 2.941 1.00 42.68 O
ATOM 20 N1 G B 65 7.499 22.852 4.697 1.00 37.97 N
ATOM 21 C2 G B 65 6.821 23.716 5.525 1.00 40.72 C
ATOM 22 N2 G B 65 6.061 23.167 6.485 1.00 41.55 N
ATOM 23 N3 G B 65 6.882 25.036 5.425 1.00 42.72 N
ATOM 24 C4 G B 65 7.685 25.428 4.410 1.00 39.53 C
ATOM 25 P C B 66 11.493 28.344 7.396 1.00 46.18 P
ATOM 26 OP1 C B 66 12.098 29.240 8.405 1.00 46.60 O
ATOM 27 OP2 C B 66 12.210 28.086 6.125 1.00 37.92 O
ATOM 28 O5' C B 66 11.144 26.941 8.076 1.00 40.09 O
TER
ATOM 2 P A A 19 8.969 11.458 4.006 1.00 36.50 P
ATOM 3 OP1 A A 19 8.285 10.151 4.120 1.00 36.66 O
ATOM 4 OP2 A A 19 9.150 12.054 2.665 1.00 32.30 O
ATOM 5 O5' A A 19 8.240 12.508 4.972 1.00 32.23 O
ATOM 6 C5' A A 19 7.923 12.084 6.282 1.00 34.17 C
ATOM 7 C4' A A 19 7.442 13.219 7.167 1.00 36.00 C
ATOM 8 O4' A A 19 8.464 14.236 7.274 1.00 36.14 O
ATOM 9 C3' A A 19 6.222 13.973 6.671 1.00 37.62 C
ATOM 10 O3' A A 19 5.039 13.300 7.049 1.00 39.34 O
ATOM 11 C2' A A 19 6.353 15.262 7.464 1.00 38.44 C
ATOM 12 O2' A A 19 5.974 15.085 8.813 1.00 41.09 O
ATOM 13 C1' A A 19 7.851 15.509 7.364 1.00 37.49 C
ATOM 14 N9 A A 19 8.225 16.291 6.189 1.00 36.63 N
ATOM 15 C8 A A 19 8.774 15.807 5.039 1.00 36.24 C
ATOM 16 N7 A A 19 9.013 16.729 4.140 1.00 37.35 N
ATOM 17 C5 A A 19 8.593 17.898 4.744 1.00 36.30 C
ATOM 18 C6 A A 19 8.586 19.228 4.301 1.00 36.69 C
ATOM 19 N6 A A 19 9.039 19.582 3.096 1.00 38.13 N
ATOM 20 N1 A A 19 8.105 20.168 5.137 1.00 35.75 N
ATOM 21 C2 A A 19 7.661 19.785 6.337 1.00 37.22 C
ATOM 22 N3 A A 19 7.620 18.562 6.867 1.00 38.59 N
ATOM 23 C4 A A 19 8.105 17.652 6.008 1.00 36.76 C
ATOM 24 P U A 20 3.732 13.469 6.145 1.00 41.84 P
ATOM 25 OP1 U A 20 2.642 12.747 6.840 1.00 40.94 O
ATOM 26 OP2 U A 20 4.088 13.134 4.744 1.00 35.80 O
ATOM 27 O5' U A 20 3.430 15.043 6.210 1.00 41.53 O
TER
ATOM 1 O3' G B 64 10.478 30.258 0.550 1.00 40.42 O
ATOM 2 P G B 65 11.274 30.018 1.923 1.00 39.23 P
ATOM 3 OP1 G B 65 12.290 31.088 2.050 1.00 39.36 O
ATOM 4 OP2 G B 65 11.699 28.608 2.061 1.00 35.55 O
ATOM 5 O5' G B 65 10.106 30.261 2.976 1.00 36.94 O
ATOM 6 C5' G B 65 10.370 29.918 4.300 1.00 38.45 C
ATOM 7 C4' G B 65 9.099 29.549 5.018 1.00 39.04 C
ATOM 8 O4' G B 65 8.089 29.045 4.107 1.00 41.85 O
ATOM 9 C3' G B 65 9.334 28.394 5.956 1.00 41.25 C
ATOM 10 O3' G B 65 10.011 28.883 7.101 1.00 43.01 O
ATOM 11 C2' G B 65 7.891 27.951 6.162 1.00 41.58 C
ATOM 12 O2' G B 65 7.144 28.891 6.898 1.00 45.15 O
ATOM 13 C1' G B 65 7.445 27.930 4.701 1.00 40.76 C
ATOM 14 N9 G B 65 7.946 26.726 4.049 1.00 40.38 N
ATOM 15 C8 G B 65 8.810 26.649 2.982 1.00 40.78 C
ATOM 16 N7 G B 65 9.105 25.425 2.630 1.00 39.20 N
ATOM 17 C5 G B 65 8.397 24.648 3.532 1.00 38.25 C
ATOM 18 C6 G B 65 8.330 23.247 3.648 1.00 39.92 C
ATOM 19 O6 G B 65 8.908 22.409 2.941 1.00 42.68 O
ATOM 20 N1 G B 65 7.499 22.852 4.697 1.00 37.97 N
ATOM 21 C2 G B 65 6.821 23.716 5.525 1.00 40.72 C
ATOM 22 N2 G B 65 6.061 23.167 6.485 1.00 41.55 N
ATOM 23 N3 G B 65 6.882 25.036 5.425 1.00 42.72 N
ATOM 24 C4 G B 65 7.685 25.428 4.410 1.00 39.53 C
ATOM 25 P C B 66 11.493 28.344 7.396 1.00 46.18 P
ATOM 26 OP1 C B 66 12.098 29.240 8.405 1.00 46.60 O
ATOM 27 OP2 C B 66 12.210 28.086 6.125 1.00 37.92 O
ATOM 28 O5' C B 66 11.144 26.941 8.076 1.00 40.09 O
TER
Atoms:
OP1: (8.285,10.151,4.120)
OP2: (9.150,12.054,2.665)
C3': (6.222,13.973,6.671)
C1': (7.851,15.509,7.364)
C5': (7.923,12.084,6.282)
O4': (8.464,14.236,7.274)
C8: (8.774,15.807,5.039)
O2': (5.974,15.085,8.813)
C6: (8.586,19.228,4.301)
C5: (8.593,17.898,4.744)
C4: (8.105,17.652,6.008)
P: (8.969,11.458,4.006)
C4': (7.442,13.219,7.167)
C2': (6.353,15.262,7.464)
C2: (7.661,19.785,6.337)
N1: (8.105,20.168,5.137)
N3: (7.620,18.562,6.867)
N6: (9.039,19.582,3.096)
N7: (9.013,16.729,4.140)
N9: (8.225,16.291,6.189)
O5': (8.240,12.508,4.972)
O3': (5.039,13.300,7.049)
OP2: (9.150,12.054,2.665)
C3': (6.222,13.973,6.671)
C1': (7.851,15.509,7.364)
C5': (7.923,12.084,6.282)
O4': (8.464,14.236,7.274)
C8: (8.774,15.807,5.039)
O2': (5.974,15.085,8.813)
C6: (8.586,19.228,4.301)
C5: (8.593,17.898,4.744)
C4: (8.105,17.652,6.008)
P: (8.969,11.458,4.006)
C4': (7.442,13.219,7.167)
C2': (6.353,15.262,7.464)
C2: (7.661,19.785,6.337)
N1: (8.105,20.168,5.137)
N3: (7.620,18.562,6.867)
N6: (9.039,19.582,3.096)
N7: (9.013,16.729,4.140)
N9: (8.225,16.291,6.189)
O5': (8.240,12.508,4.972)
O3': (5.039,13.300,7.049)
OP1: (12.290,31.088,2.050)
OP2: (11.699,28.608,2.061)
C3': (9.334,28.394,5.956)
C1': (7.445,27.930,4.701)
C5': (10.370,29.918,4.300)
O6: (8.908,22.409,2.941)
O4': (8.089,29.045,4.107)
C8: (8.810,26.649,2.982)
C2: (6.821,23.716,5.525)
C6: (8.330,23.247,3.648)
C5: (8.397,24.648,3.532)
C4: (7.685,25.428,4.410)
P: (11.274,30.018,1.923)
C4': (9.099,29.549,5.018)
C2': (7.891,27.951,6.162)
O2': (7.144,28.891,6.898)
N1: (7.499,22.852,4.697)
N2: (6.061,23.167,6.485)
N3: (6.882,25.036,5.425)
N7: (9.105,25.425,2.630)
N9: (7.946,26.726,4.049)
O5': (10.106,30.261,2.976)
O3': (10.011,28.883,7.101)
OP2: (11.699,28.608,2.061)
C3': (9.334,28.394,5.956)
C1': (7.445,27.930,4.701)
C5': (10.370,29.918,4.300)
O6: (8.908,22.409,2.941)
O4': (8.089,29.045,4.107)
C8: (8.810,26.649,2.982)
C2: (6.821,23.716,5.525)
C6: (8.330,23.247,3.648)
C5: (8.397,24.648,3.532)
C4: (7.685,25.428,4.410)
P: (11.274,30.018,1.923)
C4': (9.099,29.549,5.018)
C2': (7.891,27.951,6.162)
O2': (7.144,28.891,6.898)
N1: (7.499,22.852,4.697)
N2: (6.061,23.167,6.485)
N3: (6.882,25.036,5.425)
N7: (9.105,25.425,2.630)
N9: (7.946,26.726,4.049)
O5': (10.106,30.261,2.976)
O3': (10.011,28.883,7.101)
Image (generated by PyMOL):