Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2329:A2296
Extra
PDB:
ATOM 1 O3' U A2328 108.722 -35.962 -39.620 1.00 54.73 O
ATOM 2 P C A2329 107.508 -36.375 -40.587 1.00 56.99 P
ATOM 3 OP1 C A2329 107.019 -35.192 -41.337 1.00 62.12 O
ATOM 4 OP2 C A2329 106.568 -37.158 -39.746 1.00 54.57 O
ATOM 5 O5' C A2329 108.170 -37.370 -41.636 1.00 52.16 O
ATOM 6 C5' C A2329 107.522 -37.688 -42.860 1.00 44.31 C
ATOM 7 C4' C A2329 106.617 -38.880 -42.677 1.00 51.74 C
ATOM 8 O4' C A2329 106.175 -39.265 -44.010 1.00 58.10 O
ATOM 9 C3' C A2329 107.232 -40.131 -42.023 1.00 48.90 C
ATOM 10 O3' C A2329 106.421 -40.804 -41.067 1.00 47.56 O
ATOM 11 C2' C A2329 107.414 -41.087 -43.187 1.00 49.68 C
ATOM 12 O2' C A2329 107.172 -42.452 -42.932 1.00 55.59 O
ATOM 13 C1' C A2329 106.367 -40.646 -44.195 1.00 49.05 C
ATOM 14 N1 C A2329 107.112 -40.911 -45.424 1.00 47.32 N
ATOM 15 C2 C A2329 106.789 -42.045 -46.160 1.00 56.87 C
ATOM 16 O2 C A2329 105.696 -42.602 -45.969 1.00 61.04 O
ATOM 17 N3 C A2329 107.668 -42.496 -47.076 1.00 60.69 N
ATOM 18 C4 C A2329 108.799 -41.819 -47.302 1.00 60.54 C
ATOM 19 N4 C A2329 109.705 -42.362 -48.120 1.00 57.65 N
ATOM 20 C5 C A2329 109.067 -40.571 -46.681 1.00 58.89 C
ATOM 21 C6 C A2329 108.196 -40.149 -45.764 1.00 54.36 C
ATOM 22 P A A2330 107.086 -41.947 -40.127 1.00 37.92 P
ATOM 23 OP1 A A2330 108.166 -42.704 -40.800 1.00 42.62 O
ATOM 24 OP2 A A2330 105.977 -42.695 -39.473 1.00 41.00 O
ATOM 25 O5' A A2330 107.776 -41.115 -38.968 1.00 46.22 O
TER
ATOM 1 O3' U B2295 119.268 -42.446 -46.696 1.00 48.31 O
ATOM 2 P G B2296 118.720 -41.912 -48.109 1.00 46.64 P
ATOM 3 OP1 G B2296 119.503 -42.567 -49.211 1.00 32.56 O
ATOM 4 OP2 G B2296 118.656 -40.415 -48.024 1.00 43.85 O
ATOM 5 O5' G B2296 117.236 -42.483 -48.108 1.00 42.13 O
ATOM 6 C5' G B2296 116.970 -43.743 -47.503 1.00 46.53 C
ATOM 7 C4' G B2296 115.485 -43.978 -47.403 1.00 46.45 C
ATOM 8 O4' G B2296 114.948 -43.565 -46.120 1.00 44.90 O
ATOM 9 C3' G B2296 114.655 -43.292 -48.472 1.00 46.02 C
ATOM 10 O3' G B2296 113.814 -44.197 -49.158 1.00 42.77 O
ATOM 11 C2' G B2296 113.866 -42.247 -47.694 1.00 45.84 C
ATOM 12 O2' G B2296 112.630 -41.925 -48.296 1.00 51.45 O
ATOM 13 C1' G B2296 113.707 -42.929 -46.337 1.00 47.81 C
ATOM 14 N9 G B2296 113.441 -41.982 -45.255 1.00 48.88 N
ATOM 15 C8 G B2296 114.178 -40.874 -44.911 1.00 51.50 C
ATOM 16 N7 G B2296 113.649 -40.189 -43.934 1.00 54.09 N
ATOM 17 C5 G B2296 112.504 -40.898 -43.597 1.00 51.46 C
ATOM 18 C6 G B2296 111.522 -40.654 -42.594 1.00 49.46 C
ATOM 19 O6 G B2296 111.451 -39.724 -41.780 1.00 47.88 O
ATOM 20 N1 G B2296 110.550 -41.636 -42.588 1.00 51.13 N
ATOM 21 C2 G B2296 110.512 -42.711 -43.428 1.00 53.46 C
ATOM 22 N2 G B2296 109.499 -43.554 -43.240 1.00 52.92 N
ATOM 23 N3 G B2296 111.400 -42.950 -44.371 1.00 56.03 N
ATOM 24 C4 G B2296 112.367 -42.013 -44.396 1.00 52.79 C
ATOM 25 P A B2297 113.620 -44.018 -50.742 1.00 46.16 P
ATOM 26 OP1 A B2297 114.943 -43.719 -51.328 1.00 46.27 O
ATOM 27 OP2 A B2297 112.511 -43.059 -50.937 1.00 34.99 O
ATOM 28 O5' A B2297 113.135 -45.458 -51.228 1.00 52.84 O
TER
ATOM 2 P C A2329 107.508 -36.375 -40.587 1.00 56.99 P
ATOM 3 OP1 C A2329 107.019 -35.192 -41.337 1.00 62.12 O
ATOM 4 OP2 C A2329 106.568 -37.158 -39.746 1.00 54.57 O
ATOM 5 O5' C A2329 108.170 -37.370 -41.636 1.00 52.16 O
ATOM 6 C5' C A2329 107.522 -37.688 -42.860 1.00 44.31 C
ATOM 7 C4' C A2329 106.617 -38.880 -42.677 1.00 51.74 C
ATOM 8 O4' C A2329 106.175 -39.265 -44.010 1.00 58.10 O
ATOM 9 C3' C A2329 107.232 -40.131 -42.023 1.00 48.90 C
ATOM 10 O3' C A2329 106.421 -40.804 -41.067 1.00 47.56 O
ATOM 11 C2' C A2329 107.414 -41.087 -43.187 1.00 49.68 C
ATOM 12 O2' C A2329 107.172 -42.452 -42.932 1.00 55.59 O
ATOM 13 C1' C A2329 106.367 -40.646 -44.195 1.00 49.05 C
ATOM 14 N1 C A2329 107.112 -40.911 -45.424 1.00 47.32 N
ATOM 15 C2 C A2329 106.789 -42.045 -46.160 1.00 56.87 C
ATOM 16 O2 C A2329 105.696 -42.602 -45.969 1.00 61.04 O
ATOM 17 N3 C A2329 107.668 -42.496 -47.076 1.00 60.69 N
ATOM 18 C4 C A2329 108.799 -41.819 -47.302 1.00 60.54 C
ATOM 19 N4 C A2329 109.705 -42.362 -48.120 1.00 57.65 N
ATOM 20 C5 C A2329 109.067 -40.571 -46.681 1.00 58.89 C
ATOM 21 C6 C A2329 108.196 -40.149 -45.764 1.00 54.36 C
ATOM 22 P A A2330 107.086 -41.947 -40.127 1.00 37.92 P
ATOM 23 OP1 A A2330 108.166 -42.704 -40.800 1.00 42.62 O
ATOM 24 OP2 A A2330 105.977 -42.695 -39.473 1.00 41.00 O
ATOM 25 O5' A A2330 107.776 -41.115 -38.968 1.00 46.22 O
TER
ATOM 1 O3' U B2295 119.268 -42.446 -46.696 1.00 48.31 O
ATOM 2 P G B2296 118.720 -41.912 -48.109 1.00 46.64 P
ATOM 3 OP1 G B2296 119.503 -42.567 -49.211 1.00 32.56 O
ATOM 4 OP2 G B2296 118.656 -40.415 -48.024 1.00 43.85 O
ATOM 5 O5' G B2296 117.236 -42.483 -48.108 1.00 42.13 O
ATOM 6 C5' G B2296 116.970 -43.743 -47.503 1.00 46.53 C
ATOM 7 C4' G B2296 115.485 -43.978 -47.403 1.00 46.45 C
ATOM 8 O4' G B2296 114.948 -43.565 -46.120 1.00 44.90 O
ATOM 9 C3' G B2296 114.655 -43.292 -48.472 1.00 46.02 C
ATOM 10 O3' G B2296 113.814 -44.197 -49.158 1.00 42.77 O
ATOM 11 C2' G B2296 113.866 -42.247 -47.694 1.00 45.84 C
ATOM 12 O2' G B2296 112.630 -41.925 -48.296 1.00 51.45 O
ATOM 13 C1' G B2296 113.707 -42.929 -46.337 1.00 47.81 C
ATOM 14 N9 G B2296 113.441 -41.982 -45.255 1.00 48.88 N
ATOM 15 C8 G B2296 114.178 -40.874 -44.911 1.00 51.50 C
ATOM 16 N7 G B2296 113.649 -40.189 -43.934 1.00 54.09 N
ATOM 17 C5 G B2296 112.504 -40.898 -43.597 1.00 51.46 C
ATOM 18 C6 G B2296 111.522 -40.654 -42.594 1.00 49.46 C
ATOM 19 O6 G B2296 111.451 -39.724 -41.780 1.00 47.88 O
ATOM 20 N1 G B2296 110.550 -41.636 -42.588 1.00 51.13 N
ATOM 21 C2 G B2296 110.512 -42.711 -43.428 1.00 53.46 C
ATOM 22 N2 G B2296 109.499 -43.554 -43.240 1.00 52.92 N
ATOM 23 N3 G B2296 111.400 -42.950 -44.371 1.00 56.03 N
ATOM 24 C4 G B2296 112.367 -42.013 -44.396 1.00 52.79 C
ATOM 25 P A B2297 113.620 -44.018 -50.742 1.00 46.16 P
ATOM 26 OP1 A B2297 114.943 -43.719 -51.328 1.00 46.27 O
ATOM 27 OP2 A B2297 112.511 -43.059 -50.937 1.00 34.99 O
ATOM 28 O5' A B2297 113.135 -45.458 -51.228 1.00 52.84 O
TER
Atoms:
C2: (106.789,-42.045,-46.160)
OP1: (107.019,-35.192,-41.337)
OP2: (106.568,-37.158,-39.746)
C4: (108.799,-41.819,-47.302)
O5': (108.170,-37.370,-41.636)
C3': (107.232,-40.131,-42.023)
C1': (106.367,-40.646,-44.195)
O4': (106.175,-39.265,-44.010)
C5': (107.522,-37.688,-42.860)
P: (107.508,-36.375,-40.587)
O2: (105.696,-42.602,-45.969)
C4': (106.617,-38.880,-42.677)
C2': (107.414,-41.087,-43.187)
O2': (107.172,-42.452,-42.932)
N1: (107.112,-40.911,-45.424)
N3: (107.668,-42.496,-47.076)
N4: (109.705,-42.362,-48.120)
C6: (108.196,-40.149,-45.764)
C5: (109.067,-40.571,-46.681)
O3': (106.421,-40.804,-41.067)
OP1: (107.019,-35.192,-41.337)
OP2: (106.568,-37.158,-39.746)
C4: (108.799,-41.819,-47.302)
O5': (108.170,-37.370,-41.636)
C3': (107.232,-40.131,-42.023)
C1': (106.367,-40.646,-44.195)
O4': (106.175,-39.265,-44.010)
C5': (107.522,-37.688,-42.860)
P: (107.508,-36.375,-40.587)
O2: (105.696,-42.602,-45.969)
C4': (106.617,-38.880,-42.677)
C2': (107.414,-41.087,-43.187)
O2': (107.172,-42.452,-42.932)
N1: (107.112,-40.911,-45.424)
N3: (107.668,-42.496,-47.076)
N4: (109.705,-42.362,-48.120)
C6: (108.196,-40.149,-45.764)
C5: (109.067,-40.571,-46.681)
O3': (106.421,-40.804,-41.067)
OP1: (119.503,-42.567,-49.211)
OP2: (118.656,-40.415,-48.024)
C3': (114.655,-43.292,-48.472)
C1': (113.707,-42.929,-46.337)
C5': (116.970,-43.743,-47.503)
O6: (111.451,-39.724,-41.780)
O4': (114.948,-43.565,-46.120)
C8: (114.178,-40.874,-44.911)
C2: (110.512,-42.711,-43.428)
C6: (111.522,-40.654,-42.594)
C5: (112.504,-40.898,-43.597)
C4: (112.367,-42.013,-44.396)
P: (118.720,-41.912,-48.109)
C4': (115.485,-43.978,-47.403)
C2': (113.866,-42.247,-47.694)
O2': (112.630,-41.925,-48.296)
N1: (110.550,-41.636,-42.588)
N2: (109.499,-43.554,-43.240)
N3: (111.400,-42.950,-44.371)
N7: (113.649,-40.189,-43.934)
N9: (113.441,-41.982,-45.255)
O5': (117.236,-42.483,-48.108)
O3': (113.814,-44.197,-49.158)
OP2: (118.656,-40.415,-48.024)
C3': (114.655,-43.292,-48.472)
C1': (113.707,-42.929,-46.337)
C5': (116.970,-43.743,-47.503)
O6: (111.451,-39.724,-41.780)
O4': (114.948,-43.565,-46.120)
C8: (114.178,-40.874,-44.911)
C2: (110.512,-42.711,-43.428)
C6: (111.522,-40.654,-42.594)
C5: (112.504,-40.898,-43.597)
C4: (112.367,-42.013,-44.396)
P: (118.720,-41.912,-48.109)
C4': (115.485,-43.978,-47.403)
C2': (113.866,-42.247,-47.694)
O2': (112.630,-41.925,-48.296)
N1: (110.550,-41.636,-42.588)
N2: (109.499,-43.554,-43.240)
N3: (111.400,-42.950,-44.371)
N7: (113.649,-40.189,-43.934)
N9: (113.441,-41.982,-45.255)
O5': (117.236,-42.483,-48.108)
O3': (113.814,-44.197,-49.158)
Image (generated by PyMOL):