ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A641:A720

Extra

PDB:
ATOM 1 O3' G A 640 -50.456 50.979 13.678 1.00 94.24 O
ATOM 2 P A A 641 -50.822 49.857 14.757 1.00 99.73 P
ATOM 3 OP1 A A 641 -51.121 50.498 16.057 1.00 94.20 O
ATOM 4 OP2 A A 641 -49.792 48.797 14.679 1.00 86.65 O
ATOM 5 O5' A A 641 -52.181 49.300 14.139 1.00 85.22 O
ATOM 6 C5' A A 641 -53.201 50.231 13.832 1.00 71.60 C
ATOM 7 C4' A A 641 -54.266 49.632 12.929 1.00 78.58 C
ATOM 8 O4' A A 641 -53.802 49.619 11.556 1.00 76.91 O
ATOM 9 C3' A A 641 -54.635 48.188 13.225 1.00 75.75 C
ATOM 10 O3' A A 641 -55.627 48.127 14.228 1.00 77.84 O
ATOM 11 C2' A A 641 -55.211 47.770 11.885 1.00 69.76 C
ATOM 12 O2' A A 641 -56.495 48.317 11.667 1.00 61.02 O
ATOM 13 C1' A A 641 -54.203 48.406 10.945 1.00 75.63 C
ATOM 14 N9 A A 641 -53.022 47.577 10.717 1.00 76.99 N
ATOM 15 C8 A A 641 -51.825 47.643 11.376 1.00 81.19 C
ATOM 16 N7 A A 641 -50.937 46.778 10.947 1.00 80.71 N
ATOM 17 C5 A A 641 -51.599 46.098 9.938 1.00 78.41 C
ATOM 18 C6 A A 641 -51.206 45.053 9.082 1.00 72.35 C
ATOM 19 N6 A A 641 -49.994 44.493 9.123 1.00 67.24 N
ATOM 20 N1 A A 641 -52.106 44.603 8.184 1.00 77.15 N
ATOM 21 C2 A A 641 -53.318 45.164 8.148 1.00 75.30 C
ATOM 22 N3 A A 641 -53.799 46.153 8.899 1.00 78.13 N
ATOM 23 C4 A A 641 -52.883 46.578 9.783 1.00 77.04 C
ATOM 24 P G A 642 -55.659 46.852 15.185 1.00 79.28 P
ATOM 25 OP1 G A 642 -56.677 47.103 16.226 1.00 76.43 O
ATOM 26 OP2 G A 642 -54.268 46.512 15.546 1.00 73.85 O
ATOM 27 O5' G A 642 -56.176 45.690 14.235 1.00 89.19 O
TER

ATOM 1 O3' G B 719 -46.401 35.482 2.436 1.00 76.32 O
ATOM 2 P G B 720 -45.692 36.840 1.965 1.00 78.68 P
ATOM 3 OP1 G B 720 -45.074 36.603 0.641 1.00 65.13 O
ATOM 4 OP2 G B 720 -44.876 37.365 3.084 1.00 62.81 O
ATOM 5 O5' G B 720 -46.945 37.799 1.739 1.00 63.25 O
ATOM 6 C5' G B 720 -47.889 37.411 0.754 1.00 59.67 C
ATOM 7 C4' G B 720 -49.291 37.910 1.052 1.00 60.34 C
ATOM 8 O4' G B 720 -49.637 37.669 2.435 1.00 65.17 O
ATOM 9 C3' G B 720 -49.497 39.402 0.896 1.00 62.47 C
ATOM 10 O3' G B 720 -49.633 39.701 -0.476 1.00 71.82 O
ATOM 11 C2' G B 720 -50.814 39.558 1.640 1.00 62.34 C
ATOM 12 O2' G B 720 -51.915 39.080 0.898 1.00 57.31 O
ATOM 13 C1' G B 720 -50.577 38.646 2.836 1.00 66.84 C
ATOM 14 N9 G B 720 -50.028 39.360 3.975 1.00 68.48 N
ATOM 15 C8 G B 720 -48.839 39.104 4.603 1.00 72.67 C
ATOM 16 N7 G B 720 -48.599 39.911 5.598 1.00 74.38 N
ATOM 17 C5 G B 720 -49.701 40.754 5.628 1.00 70.89 C
ATOM 18 C6 G B 720 -49.993 41.826 6.498 1.00 66.78 C
ATOM 19 O6 G B 720 -49.312 42.255 7.440 1.00 75.16 O
ATOM 20 N1 G B 720 -51.213 42.408 6.188 1.00 61.04 N
ATOM 21 C2 G B 720 -52.030 42.003 5.167 1.00 60.18 C
ATOM 22 N2 G B 720 -53.166 42.687 5.018 1.00 76.15 N
ATOM 23 N3 G B 720 -51.768 41.008 4.343 1.00 55.11 N
ATOM 24 C4 G B 720 -50.588 40.428 4.633 1.00 63.21 C
ATOM 25 P U B 721 -48.741 40.848 -1.139 1.00101.12 P
ATOM 26 OP1 U B 721 -48.956 40.754 -2.603 1.00 93.68 O
ATOM 27 OP2 U B 721 -47.370 40.794 -0.574 1.00102.22 O
ATOM 28 O5' U B 721 -49.424 42.182 -0.580 1.00 84.33 O
TER

Atoms:
OP1: (-51.121,50.498,16.057)
OP2: (-49.792,48.797,14.679)
C3': (-54.635,48.188,13.225)
C1': (-54.203,48.406,10.945)
C5': (-53.201,50.231,13.832)
O4': (-53.802,49.619,11.556)
C8: (-51.825,47.643,11.376)
O2': (-56.495,48.317,11.667)
C6: (-51.206,45.053,9.082)
C5: (-51.599,46.098,9.938)
C4: (-52.883,46.578,9.783)
P: (-50.822,49.857,14.757)
C4': (-54.266,49.632,12.929)
C2': (-55.211,47.770,11.885)
C2: (-53.318,45.164,8.148)
N1: (-52.106,44.603,8.184)
N3: (-53.799,46.153,8.899)
N6: (-49.994,44.493,9.123)
N7: (-50.937,46.778,10.947)
N9: (-53.022,47.577,10.717)
O5': (-52.181,49.300,14.139)
O3': (-55.627,48.127,14.228)
OP1: (-45.074,36.603,0.641)
OP2: (-44.876,37.365,3.084)
C3': (-49.497,39.402,0.896)
C1': (-50.577,38.646,2.836)
C5': (-47.889,37.411,0.754)
O6: (-49.312,42.255,7.440)
O4': (-49.637,37.669,2.435)
C8: (-48.839,39.104,4.603)
C2: (-52.030,42.003,5.167)
C6: (-49.993,41.826,6.498)
C5: (-49.701,40.754,5.628)
C4: (-50.588,40.428,4.633)
P: (-45.692,36.840,1.965)
C4': (-49.291,37.910,1.052)
C2': (-50.814,39.558,1.640)
O2': (-51.915,39.080,0.898)
N1: (-51.213,42.408,6.188)
N2: (-53.166,42.687,5.018)
N3: (-51.768,41.008,4.343)
N7: (-48.599,39.911,5.598)
N9: (-50.028,39.360,3.975)
O5': (-46.945,37.799,1.739)
O3': (-49.633,39.701,-0.476)
Image (generated by PyMOL):
PyMOL image
show in jmol