Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A59:A376
Extra
PDB:
ATOM 1 O3' A A 58 -15.250 29.673 123.318 1.00 8.77 O
ATOM 2 P G A 59 -16.284 28.881 124.252 1.00 13.17 P
ATOM 3 OP1 G A 59 -17.633 29.549 124.087 1.00 13.17 O
ATOM 4 OP2 G A 59 -15.675 28.791 125.628 1.00 13.17 O
ATOM 5 O5' G A 59 -16.321 27.444 123.555 1.00 13.17 O
ATOM 6 C5' G A 59 -15.285 26.514 123.762 1.00 13.17 C
ATOM 7 C4' G A 59 -14.512 26.293 122.514 1.00 13.17 C
ATOM 8 O4' G A 59 -13.567 27.365 122.341 1.00 13.17 O
ATOM 9 C3' G A 59 -13.665 25.041 122.488 1.00 13.17 C
ATOM 10 O3' G A 59 -14.412 23.899 122.121 1.00 13.17 O
ATOM 11 C2' G A 59 -12.601 25.395 121.481 1.00 13.17 C
ATOM 12 O2' G A 59 -13.125 25.293 120.163 1.00 13.17 O
ATOM 13 C1' G A 59 -12.368 26.861 121.797 1.00 13.17 C
ATOM 14 N9 G A 59 -11.300 27.051 122.786 1.00 12.87 N
ATOM 15 C8 G A 59 -11.570 27.346 124.090 1.00 12.87 C
ATOM 16 N7 G A 59 -10.510 27.506 124.809 1.00 12.87 N
ATOM 17 C5 G A 59 -9.479 27.310 123.931 1.00 12.87 C
ATOM 18 C6 G A 59 -8.099 27.364 124.198 1.00 12.87 C
ATOM 19 O6 G A 59 -7.569 27.609 125.280 1.00 12.87 O
ATOM 20 N1 G A 59 -7.325 27.113 123.078 1.00 12.87 N
ATOM 21 C2 G A 59 -7.846 26.841 121.850 1.00 12.87 C
ATOM 22 N2 G A 59 -6.914 26.637 120.927 1.00 12.87 N
ATOM 23 N3 G A 59 -9.151 26.788 121.563 1.00 12.87 N
ATOM 24 C4 G A 59 -9.924 27.036 122.658 1.00 12.87 C
ATOM 25 P U A 60 -14.492 22.638 123.102 1.00 21.74 P
ATOM 26 OP1 U A 60 -15.823 22.018 122.887 1.00 21.74 O
ATOM 27 OP2 U A 60 -14.142 23.115 124.456 1.00 21.74 O
ATOM 28 O5' U A 60 -13.333 21.691 122.559 1.00 21.74 O
TER
ATOM 1 O3' G B 375 -7.303 28.851 111.130 1.00 12.75 O
ATOM 2 P G B 376 -6.206 27.811 111.642 1.00 14.25 P
ATOM 3 OP1 G B 376 -4.871 28.302 111.169 1.00 14.25 O
ATOM 4 OP2 G B 376 -6.662 26.476 111.224 1.00 14.25 O
ATOM 5 O5' G B 376 -6.321 27.937 113.239 1.00 14.25 O
ATOM 6 C5' G B 376 -7.326 28.741 113.854 1.00 14.25 C
ATOM 7 C4' G B 376 -7.703 28.216 115.216 1.00 14.25 C
ATOM 8 O4' G B 376 -9.049 27.672 115.177 1.00 14.25 O
ATOM 9 C3' G B 376 -6.843 27.078 115.752 1.00 14.25 C
ATOM 10 O3' G B 376 -5.653 27.530 116.382 1.00 14.25 O
ATOM 11 C2' G B 376 -7.784 26.332 116.693 1.00 14.25 C
ATOM 12 O2' G B 376 -7.779 26.922 117.982 1.00 14.25 O
ATOM 13 C1' G B 376 -9.156 26.571 116.054 1.00 14.25 C
ATOM 14 N9 G B 376 -9.632 25.420 115.278 1.00 13.86 N
ATOM 15 C8 G B 376 -9.333 25.284 113.945 1.00 13.86 C
ATOM 16 N7 G B 376 -9.879 24.236 113.395 1.00 13.86 N
ATOM 17 C5 G B 376 -10.603 23.663 114.440 1.00 13.86 C
ATOM 18 C6 G B 376 -11.387 22.486 114.413 1.00 13.86 C
ATOM 19 O6 G B 376 -11.583 21.742 113.457 1.00 13.86 O
ATOM 20 N1 G B 376 -11.966 22.195 115.638 1.00 13.86 N
ATOM 21 C2 G B 376 -11.818 22.945 116.785 1.00 13.86 C
ATOM 22 N2 G B 376 -12.491 22.412 117.851 1.00 13.86 N
ATOM 23 N3 G B 376 -11.064 24.075 116.835 1.00 13.86 N
ATOM 24 C4 G B 376 -10.484 24.375 115.626 1.00 13.86 C
ATOM 25 P C B 377 -4.336 26.609 116.357 1.00 8.60 P
ATOM 26 OP1 C B 377 -3.256 27.358 117.016 1.00 8.60 O
ATOM 27 OP2 C B 377 -4.138 26.175 114.965 1.00 8.60 O
ATOM 28 O5' C B 377 -4.754 25.366 117.249 1.00 8.60 O
TER
ATOM 2 P G A 59 -16.284 28.881 124.252 1.00 13.17 P
ATOM 3 OP1 G A 59 -17.633 29.549 124.087 1.00 13.17 O
ATOM 4 OP2 G A 59 -15.675 28.791 125.628 1.00 13.17 O
ATOM 5 O5' G A 59 -16.321 27.444 123.555 1.00 13.17 O
ATOM 6 C5' G A 59 -15.285 26.514 123.762 1.00 13.17 C
ATOM 7 C4' G A 59 -14.512 26.293 122.514 1.00 13.17 C
ATOM 8 O4' G A 59 -13.567 27.365 122.341 1.00 13.17 O
ATOM 9 C3' G A 59 -13.665 25.041 122.488 1.00 13.17 C
ATOM 10 O3' G A 59 -14.412 23.899 122.121 1.00 13.17 O
ATOM 11 C2' G A 59 -12.601 25.395 121.481 1.00 13.17 C
ATOM 12 O2' G A 59 -13.125 25.293 120.163 1.00 13.17 O
ATOM 13 C1' G A 59 -12.368 26.861 121.797 1.00 13.17 C
ATOM 14 N9 G A 59 -11.300 27.051 122.786 1.00 12.87 N
ATOM 15 C8 G A 59 -11.570 27.346 124.090 1.00 12.87 C
ATOM 16 N7 G A 59 -10.510 27.506 124.809 1.00 12.87 N
ATOM 17 C5 G A 59 -9.479 27.310 123.931 1.00 12.87 C
ATOM 18 C6 G A 59 -8.099 27.364 124.198 1.00 12.87 C
ATOM 19 O6 G A 59 -7.569 27.609 125.280 1.00 12.87 O
ATOM 20 N1 G A 59 -7.325 27.113 123.078 1.00 12.87 N
ATOM 21 C2 G A 59 -7.846 26.841 121.850 1.00 12.87 C
ATOM 22 N2 G A 59 -6.914 26.637 120.927 1.00 12.87 N
ATOM 23 N3 G A 59 -9.151 26.788 121.563 1.00 12.87 N
ATOM 24 C4 G A 59 -9.924 27.036 122.658 1.00 12.87 C
ATOM 25 P U A 60 -14.492 22.638 123.102 1.00 21.74 P
ATOM 26 OP1 U A 60 -15.823 22.018 122.887 1.00 21.74 O
ATOM 27 OP2 U A 60 -14.142 23.115 124.456 1.00 21.74 O
ATOM 28 O5' U A 60 -13.333 21.691 122.559 1.00 21.74 O
TER
ATOM 1 O3' G B 375 -7.303 28.851 111.130 1.00 12.75 O
ATOM 2 P G B 376 -6.206 27.811 111.642 1.00 14.25 P
ATOM 3 OP1 G B 376 -4.871 28.302 111.169 1.00 14.25 O
ATOM 4 OP2 G B 376 -6.662 26.476 111.224 1.00 14.25 O
ATOM 5 O5' G B 376 -6.321 27.937 113.239 1.00 14.25 O
ATOM 6 C5' G B 376 -7.326 28.741 113.854 1.00 14.25 C
ATOM 7 C4' G B 376 -7.703 28.216 115.216 1.00 14.25 C
ATOM 8 O4' G B 376 -9.049 27.672 115.177 1.00 14.25 O
ATOM 9 C3' G B 376 -6.843 27.078 115.752 1.00 14.25 C
ATOM 10 O3' G B 376 -5.653 27.530 116.382 1.00 14.25 O
ATOM 11 C2' G B 376 -7.784 26.332 116.693 1.00 14.25 C
ATOM 12 O2' G B 376 -7.779 26.922 117.982 1.00 14.25 O
ATOM 13 C1' G B 376 -9.156 26.571 116.054 1.00 14.25 C
ATOM 14 N9 G B 376 -9.632 25.420 115.278 1.00 13.86 N
ATOM 15 C8 G B 376 -9.333 25.284 113.945 1.00 13.86 C
ATOM 16 N7 G B 376 -9.879 24.236 113.395 1.00 13.86 N
ATOM 17 C5 G B 376 -10.603 23.663 114.440 1.00 13.86 C
ATOM 18 C6 G B 376 -11.387 22.486 114.413 1.00 13.86 C
ATOM 19 O6 G B 376 -11.583 21.742 113.457 1.00 13.86 O
ATOM 20 N1 G B 376 -11.966 22.195 115.638 1.00 13.86 N
ATOM 21 C2 G B 376 -11.818 22.945 116.785 1.00 13.86 C
ATOM 22 N2 G B 376 -12.491 22.412 117.851 1.00 13.86 N
ATOM 23 N3 G B 376 -11.064 24.075 116.835 1.00 13.86 N
ATOM 24 C4 G B 376 -10.484 24.375 115.626 1.00 13.86 C
ATOM 25 P C B 377 -4.336 26.609 116.357 1.00 8.60 P
ATOM 26 OP1 C B 377 -3.256 27.358 117.016 1.00 8.60 O
ATOM 27 OP2 C B 377 -4.138 26.175 114.965 1.00 8.60 O
ATOM 28 O5' C B 377 -4.754 25.366 117.249 1.00 8.60 O
TER
Atoms:
OP1: (-17.633,29.549,124.087)
OP2: (-15.675,28.791,125.628)
C3': (-13.665,25.041,122.488)
C1': (-12.368,26.861,121.797)
C5': (-15.285,26.514,123.762)
O6: (-7.569,27.609,125.280)
O4': (-13.567,27.365,122.341)
C8: (-11.570,27.346,124.090)
C2: (-7.846,26.841,121.850)
C6: (-8.099,27.364,124.198)
C5: (-9.479,27.310,123.931)
C4: (-9.924,27.036,122.658)
P: (-16.284,28.881,124.252)
C4': (-14.512,26.293,122.514)
C2': (-12.601,25.395,121.481)
O2': (-13.125,25.293,120.163)
N1: (-7.325,27.113,123.078)
N2: (-6.914,26.637,120.927)
N3: (-9.151,26.788,121.563)
N7: (-10.510,27.506,124.809)
N9: (-11.300,27.051,122.786)
O5': (-16.321,27.444,123.555)
O3': (-14.412,23.899,122.121)
OP2: (-15.675,28.791,125.628)
C3': (-13.665,25.041,122.488)
C1': (-12.368,26.861,121.797)
C5': (-15.285,26.514,123.762)
O6: (-7.569,27.609,125.280)
O4': (-13.567,27.365,122.341)
C8: (-11.570,27.346,124.090)
C2: (-7.846,26.841,121.850)
C6: (-8.099,27.364,124.198)
C5: (-9.479,27.310,123.931)
C4: (-9.924,27.036,122.658)
P: (-16.284,28.881,124.252)
C4': (-14.512,26.293,122.514)
C2': (-12.601,25.395,121.481)
O2': (-13.125,25.293,120.163)
N1: (-7.325,27.113,123.078)
N2: (-6.914,26.637,120.927)
N3: (-9.151,26.788,121.563)
N7: (-10.510,27.506,124.809)
N9: (-11.300,27.051,122.786)
O5': (-16.321,27.444,123.555)
O3': (-14.412,23.899,122.121)
OP1: (-4.871,28.302,111.169)
OP2: (-6.662,26.476,111.224)
C3': (-6.843,27.078,115.752)
C1': (-9.156,26.571,116.054)
C5': (-7.326,28.741,113.854)
O6: (-11.583,21.742,113.457)
O4': (-9.049,27.672,115.177)
C8: (-9.333,25.284,113.945)
C2: (-11.818,22.945,116.785)
C6: (-11.387,22.486,114.413)
C5: (-10.603,23.663,114.440)
C4: (-10.484,24.375,115.626)
P: (-6.206,27.811,111.642)
C4': (-7.703,28.216,115.216)
C2': (-7.784,26.332,116.693)
O2': (-7.779,26.922,117.982)
N1: (-11.966,22.195,115.638)
N2: (-12.491,22.412,117.851)
N3: (-11.064,24.075,116.835)
N7: (-9.879,24.236,113.395)
N9: (-9.632,25.420,115.278)
O5': (-6.321,27.937,113.239)
O3': (-5.653,27.530,116.382)
OP2: (-6.662,26.476,111.224)
C3': (-6.843,27.078,115.752)
C1': (-9.156,26.571,116.054)
C5': (-7.326,28.741,113.854)
O6: (-11.583,21.742,113.457)
O4': (-9.049,27.672,115.177)
C8: (-9.333,25.284,113.945)
C2: (-11.818,22.945,116.785)
C6: (-11.387,22.486,114.413)
C5: (-10.603,23.663,114.440)
C4: (-10.484,24.375,115.626)
P: (-6.206,27.811,111.642)
C4': (-7.703,28.216,115.216)
C2': (-7.784,26.332,116.693)
O2': (-7.779,26.922,117.982)
N1: (-11.966,22.195,115.638)
N2: (-12.491,22.412,117.851)
N3: (-11.064,24.075,116.835)
N7: (-9.879,24.236,113.395)
N9: (-9.632,25.420,115.278)
O5': (-6.321,27.937,113.239)
O3': (-5.653,27.530,116.382)
Image (generated by PyMOL):