Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02480:01925
Extra
PDB:
ATOM 1 O3' G A2479 88.875 116.591 104.840 1.00 51.84 O
ATOM 2 P G A2480 88.390 118.127 104.883 1.00 49.79 P
ATOM 3 OP1 G A2480 87.820 118.383 106.228 1.00 49.63 O
ATOM 4 OP2 G A2480 87.564 118.400 103.676 1.00 51.55 O
ATOM 5 O5' G A2480 89.736 118.965 104.740 1.00 47.57 O
ATOM 6 C5' G A2480 90.730 118.942 105.771 1.00 44.75 C
ATOM 7 C4' G A2480 91.869 119.869 105.430 1.00 42.67 C
ATOM 8 O4' G A2480 92.588 119.376 104.271 1.00 42.10 O
ATOM 9 C3' G A2480 91.494 121.278 105.020 1.00 42.06 C
ATOM 10 O3' G A2480 91.172 122.114 106.119 1.00 41.69 O
ATOM 11 C2' G A2480 92.762 121.732 104.316 1.00 41.67 C
ATOM 12 O2' G A2480 93.808 122.017 105.219 1.00 42.37 O
ATOM 13 C1' G A2480 93.128 120.470 103.543 1.00 41.60 C
ATOM 14 N9 G A2480 92.558 120.483 102.197 1.00 42.49 N
ATOM 15 C8 G A2480 91.413 119.858 101.767 1.00 43.86 C
ATOM 16 N7 G A2480 91.162 120.062 100.504 1.00 43.21 N
ATOM 17 C5 G A2480 92.203 120.868 100.073 1.00 43.12 C
ATOM 18 C6 G A2480 92.473 121.406 98.796 1.00 44.54 C
ATOM 19 O6 G A2480 91.833 121.262 97.748 1.00 46.63 O
ATOM 20 N1 G A2480 93.629 122.175 98.802 1.00 43.31 N
ATOM 21 C2 G A2480 94.427 122.381 99.889 1.00 42.35 C
ATOM 22 N2 G A2480 95.504 123.137 99.692 1.00 43.69 N
ATOM 23 N3 G A2480 94.191 121.880 101.080 1.00 42.53 N
ATOM 24 C4 G A2480 93.070 121.139 101.103 1.00 42.29 C
ATOM 25 P U A2481 90.332 123.458 105.861 1.00 41.96 P
ATOM 26 OP1 U A2481 90.256 124.200 107.144 1.00 41.89 O
ATOM 27 OP2 U A2481 89.079 123.095 105.149 1.00 42.87 O
ATOM 28 O5' U A2481 91.229 124.281 104.834 1.00 37.84 O
TER
ATOM 1 O3' A B1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 2 P G B1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 3 OP1 G B1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 4 OP2 G B1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 5 O5' G B1925 100.007 126.647 105.195 1.00 51.47 O
ATOM 6 C5' G B1925 98.639 126.822 105.625 1.00 51.20 C
ATOM 7 C4' G B1925 97.681 126.215 104.627 1.00 50.13 C
ATOM 8 O4' G B1925 97.507 127.131 103.513 1.00 48.81 O
ATOM 9 C3' G B1925 98.104 124.870 104.031 1.00 50.63 C
ATOM 10 O3' G B1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 11 C2' G B1925 98.380 125.202 102.570 1.00 49.92 C
ATOM 12 O2' G B1925 98.112 124.130 101.687 1.00 48.39 O
ATOM 13 C1' G B1925 97.456 126.391 102.321 1.00 49.99 C
ATOM 14 N9 G B1925 97.964 127.213 101.224 1.00 51.81 N
ATOM 15 C8 G B1925 99.276 127.533 100.980 1.00 52.73 C
ATOM 16 N7 G B1925 99.454 128.128 99.834 1.00 53.29 N
ATOM 17 C5 G B1925 98.180 128.242 99.304 1.00 52.67 C
ATOM 18 C6 G B1925 97.753 128.771 98.073 1.00 52.98 C
ATOM 19 O6 G B1925 98.439 129.212 97.150 1.00 54.58 O
ATOM 20 N1 G B1925 96.372 128.744 97.955 1.00 53.13 N
ATOM 21 C2 G B1925 95.512 128.248 98.894 1.00 52.50 C
ATOM 22 N2 G B1925 94.209 128.342 98.606 1.00 52.06 N
ATOM 23 N3 G B1925 95.899 127.708 100.034 1.00 53.30 N
ATOM 24 C4 G B1925 97.241 127.737 100.174 1.00 52.88 C
ATOM 25 P U B1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 26 OP1 U B1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 27 OP2 U B1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 28 O5' U B1926 98.508 121.764 103.686 1.00 52.47 O
TER
ATOM 2 P G A2480 88.390 118.127 104.883 1.00 49.79 P
ATOM 3 OP1 G A2480 87.820 118.383 106.228 1.00 49.63 O
ATOM 4 OP2 G A2480 87.564 118.400 103.676 1.00 51.55 O
ATOM 5 O5' G A2480 89.736 118.965 104.740 1.00 47.57 O
ATOM 6 C5' G A2480 90.730 118.942 105.771 1.00 44.75 C
ATOM 7 C4' G A2480 91.869 119.869 105.430 1.00 42.67 C
ATOM 8 O4' G A2480 92.588 119.376 104.271 1.00 42.10 O
ATOM 9 C3' G A2480 91.494 121.278 105.020 1.00 42.06 C
ATOM 10 O3' G A2480 91.172 122.114 106.119 1.00 41.69 O
ATOM 11 C2' G A2480 92.762 121.732 104.316 1.00 41.67 C
ATOM 12 O2' G A2480 93.808 122.017 105.219 1.00 42.37 O
ATOM 13 C1' G A2480 93.128 120.470 103.543 1.00 41.60 C
ATOM 14 N9 G A2480 92.558 120.483 102.197 1.00 42.49 N
ATOM 15 C8 G A2480 91.413 119.858 101.767 1.00 43.86 C
ATOM 16 N7 G A2480 91.162 120.062 100.504 1.00 43.21 N
ATOM 17 C5 G A2480 92.203 120.868 100.073 1.00 43.12 C
ATOM 18 C6 G A2480 92.473 121.406 98.796 1.00 44.54 C
ATOM 19 O6 G A2480 91.833 121.262 97.748 1.00 46.63 O
ATOM 20 N1 G A2480 93.629 122.175 98.802 1.00 43.31 N
ATOM 21 C2 G A2480 94.427 122.381 99.889 1.00 42.35 C
ATOM 22 N2 G A2480 95.504 123.137 99.692 1.00 43.69 N
ATOM 23 N3 G A2480 94.191 121.880 101.080 1.00 42.53 N
ATOM 24 C4 G A2480 93.070 121.139 101.103 1.00 42.29 C
ATOM 25 P U A2481 90.332 123.458 105.861 1.00 41.96 P
ATOM 26 OP1 U A2481 90.256 124.200 107.144 1.00 41.89 O
ATOM 27 OP2 U A2481 89.079 123.095 105.149 1.00 42.87 O
ATOM 28 O5' U A2481 91.229 124.281 104.834 1.00 37.84 O
TER
ATOM 1 O3' A B1924 101.854 125.324 106.308 1.00 50.33 O
ATOM 2 P G B1925 101.209 126.785 106.233 1.00 50.00 P
ATOM 3 OP1 G B1925 102.237 127.682 105.653 1.00 51.13 O
ATOM 4 OP2 G B1925 100.639 127.085 107.570 1.00 49.71 O
ATOM 5 O5' G B1925 100.007 126.647 105.195 1.00 51.47 O
ATOM 6 C5' G B1925 98.639 126.822 105.625 1.00 51.20 C
ATOM 7 C4' G B1925 97.681 126.215 104.627 1.00 50.13 C
ATOM 8 O4' G B1925 97.507 127.131 103.513 1.00 48.81 O
ATOM 9 C3' G B1925 98.104 124.870 104.031 1.00 50.63 C
ATOM 10 O3' G B1925 97.119 123.853 104.149 1.00 51.70 O
ATOM 11 C2' G B1925 98.380 125.202 102.570 1.00 49.92 C
ATOM 12 O2' G B1925 98.112 124.130 101.687 1.00 48.39 O
ATOM 13 C1' G B1925 97.456 126.391 102.321 1.00 49.99 C
ATOM 14 N9 G B1925 97.964 127.213 101.224 1.00 51.81 N
ATOM 15 C8 G B1925 99.276 127.533 100.980 1.00 52.73 C
ATOM 16 N7 G B1925 99.454 128.128 99.834 1.00 53.29 N
ATOM 17 C5 G B1925 98.180 128.242 99.304 1.00 52.67 C
ATOM 18 C6 G B1925 97.753 128.771 98.073 1.00 52.98 C
ATOM 19 O6 G B1925 98.439 129.212 97.150 1.00 54.58 O
ATOM 20 N1 G B1925 96.372 128.744 97.955 1.00 53.13 N
ATOM 21 C2 G B1925 95.512 128.248 98.894 1.00 52.50 C
ATOM 22 N2 G B1925 94.209 128.342 98.606 1.00 52.06 N
ATOM 23 N3 G B1925 95.899 127.708 100.034 1.00 53.30 N
ATOM 24 C4 G B1925 97.241 127.737 100.174 1.00 52.88 C
ATOM 25 P U B1926 97.537 122.417 104.764 1.00 54.20 P
ATOM 26 OP1 U B1926 96.313 121.578 104.810 1.00 55.06 O
ATOM 27 OP2 U B1926 98.326 122.631 106.011 1.00 53.66 O
ATOM 28 O5' U B1926 98.508 121.764 103.686 1.00 52.47 O
TER
Atoms:
OP1: (87.820,118.383,106.228)
OP2: (87.564,118.400,103.676)
C3': (91.494,121.278,105.020)
C1': (93.128,120.470,103.543)
C5': (90.730,118.942,105.771)
O6: (91.833,121.262,97.748)
O4': (92.588,119.376,104.271)
C8: (91.413,119.858,101.767)
C2: (94.427,122.381,99.889)
C6: (92.473,121.406,98.796)
C5: (92.203,120.868,100.073)
C4: (93.070,121.139,101.103)
P: (88.390,118.127,104.883)
C4': (91.869,119.869,105.430)
C2': (92.762,121.732,104.316)
O2': (93.808,122.017,105.219)
N1: (93.629,122.175,98.802)
N2: (95.504,123.137,99.692)
N3: (94.191,121.880,101.080)
N7: (91.162,120.062,100.504)
N9: (92.558,120.483,102.197)
O5': (89.736,118.965,104.740)
O3': (91.172,122.114,106.119)
OP2: (87.564,118.400,103.676)
C3': (91.494,121.278,105.020)
C1': (93.128,120.470,103.543)
C5': (90.730,118.942,105.771)
O6: (91.833,121.262,97.748)
O4': (92.588,119.376,104.271)
C8: (91.413,119.858,101.767)
C2: (94.427,122.381,99.889)
C6: (92.473,121.406,98.796)
C5: (92.203,120.868,100.073)
C4: (93.070,121.139,101.103)
P: (88.390,118.127,104.883)
C4': (91.869,119.869,105.430)
C2': (92.762,121.732,104.316)
O2': (93.808,122.017,105.219)
N1: (93.629,122.175,98.802)
N2: (95.504,123.137,99.692)
N3: (94.191,121.880,101.080)
N7: (91.162,120.062,100.504)
N9: (92.558,120.483,102.197)
O5': (89.736,118.965,104.740)
O3': (91.172,122.114,106.119)
OP1: (102.237,127.682,105.653)
OP2: (100.639,127.085,107.570)
C3': (98.104,124.870,104.031)
C1': (97.456,126.391,102.321)
C5': (98.639,126.822,105.625)
O6: (98.439,129.212,97.150)
O4': (97.507,127.131,103.513)
C8: (99.276,127.533,100.980)
C2: (95.512,128.248,98.894)
C6: (97.753,128.771,98.073)
C5: (98.180,128.242,99.304)
C4: (97.241,127.737,100.174)
P: (101.209,126.785,106.233)
C4': (97.681,126.215,104.627)
C2': (98.380,125.202,102.570)
O2': (98.112,124.130,101.687)
N1: (96.372,128.744,97.955)
N2: (94.209,128.342,98.606)
N3: (95.899,127.708,100.034)
N7: (99.454,128.128,99.834)
N9: (97.964,127.213,101.224)
O5': (100.007,126.647,105.195)
O3': (97.119,123.853,104.149)
OP2: (100.639,127.085,107.570)
C3': (98.104,124.870,104.031)
C1': (97.456,126.391,102.321)
C5': (98.639,126.822,105.625)
O6: (98.439,129.212,97.150)
O4': (97.507,127.131,103.513)
C8: (99.276,127.533,100.980)
C2: (95.512,128.248,98.894)
C6: (97.753,128.771,98.073)
C5: (98.180,128.242,99.304)
C4: (97.241,127.737,100.174)
P: (101.209,126.785,106.233)
C4': (97.681,126.215,104.627)
C2': (98.380,125.202,102.570)
O2': (98.112,124.130,101.687)
N1: (96.372,128.744,97.955)
N2: (94.209,128.342,98.606)
N3: (95.899,127.708,100.034)
N7: (99.454,128.128,99.834)
N9: (97.964,127.213,101.224)
O5': (100.007,126.647,105.195)
O3': (97.119,123.853,104.149)
Image (generated by PyMOL):