Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0516:0598
Extra
PDB:
ATOM 1 O3' U A 515 11.354 145.735 91.656 1.00 53.27 O
ATOM 2 P G A 516 11.333 145.192 93.175 1.00 54.71 P
ATOM 3 OP1 G A 516 9.971 145.453 93.713 1.00 55.86 O
ATOM 4 OP2 G A 516 12.519 145.724 93.898 1.00 56.02 O
ATOM 5 O5' G A 516 11.508 143.616 93.030 1.00 52.05 O
ATOM 6 C5' G A 516 10.448 142.814 92.489 1.00 52.61 C
ATOM 7 C4' G A 516 10.869 141.371 92.411 1.00 53.40 C
ATOM 8 O4' G A 516 11.953 141.233 91.452 1.00 55.08 O
ATOM 9 C3' G A 516 11.433 140.773 93.689 1.00 53.19 C
ATOM 10 O3' G A 516 10.418 140.373 94.599 1.00 51.29 O
ATOM 11 C2' G A 516 12.232 139.595 93.149 1.00 53.77 C
ATOM 12 O2' G A 516 11.402 138.510 92.793 1.00 53.77 O
ATOM 13 C1' G A 516 12.842 140.211 91.885 1.00 53.80 C
ATOM 14 N9 G A 516 14.152 140.808 92.142 1.00 51.97 N
ATOM 15 C8 G A 516 14.438 142.132 92.387 1.00 52.15 C
ATOM 16 N7 G A 516 15.706 142.350 92.611 1.00 51.54 N
ATOM 17 C5 G A 516 16.293 141.098 92.498 1.00 50.62 C
ATOM 18 C6 G A 516 17.646 140.706 92.628 1.00 50.35 C
ATOM 19 O6 G A 516 18.631 141.408 92.881 1.00 49.58 O
ATOM 20 N1 G A 516 17.801 139.339 92.428 1.00 49.35 N
ATOM 21 C2 G A 516 16.785 138.462 92.143 1.00 48.58 C
ATOM 22 N2 G A 516 17.134 137.182 91.979 1.00 48.61 N
ATOM 23 N3 G A 516 15.521 138.813 92.025 1.00 49.03 N
ATOM 24 C4 G A 516 15.347 140.137 92.209 1.00 50.47 C
ATOM 25 P G A 517 10.632 140.591 96.178 1.00 52.53 P
ATOM 26 OP1 G A 517 9.331 140.294 96.832 1.00 53.99 O
ATOM 27 OP2 G A 517 11.279 141.908 96.415 1.00 51.01 O
ATOM 28 O5' G A 517 11.660 139.442 96.584 1.00 51.07 O
TER
ATOM 1 O3' U B 597 14.468 128.951 85.672 1.00 48.05 O
ATOM 2 P G B 598 15.565 128.798 86.840 1.00 46.86 P
ATOM 3 OP1 G B 598 16.893 128.744 86.182 1.00 47.25 O
ATOM 4 OP2 G B 598 15.158 127.701 87.751 1.00 46.39 O
ATOM 5 O5' G B 598 15.447 130.173 87.636 1.00 45.68 O
ATOM 6 C5' G B 598 15.833 131.407 87.011 1.00 43.87 C
ATOM 7 C4' G B 598 15.673 132.559 87.967 1.00 42.89 C
ATOM 8 O4' G B 598 14.270 132.832 88.179 1.00 42.76 O
ATOM 9 C3' G B 598 16.210 132.345 89.368 1.00 44.34 C
ATOM 10 O3' G B 598 17.617 132.509 89.445 1.00 46.12 O
ATOM 11 C2' G B 598 15.452 133.405 90.148 1.00 43.97 C
ATOM 12 O2' G B 598 15.968 134.702 89.942 1.00 44.72 O
ATOM 13 C1' G B 598 14.072 133.303 89.502 1.00 42.01 C
ATOM 14 N9 G B 598 13.217 132.354 90.205 1.00 41.05 N
ATOM 15 C8 G B 598 12.953 131.049 89.857 1.00 41.37 C
ATOM 16 N7 G B 598 12.156 130.446 90.697 1.00 42.06 N
ATOM 17 C5 G B 598 11.871 131.410 91.655 1.00 42.36 C
ATOM 18 C6 G B 598 11.057 131.340 92.823 1.00 42.58 C
ATOM 19 O6 G B 598 10.400 130.382 93.252 1.00 43.11 O
ATOM 20 N1 G B 598 11.054 132.547 93.517 1.00 41.55 N
ATOM 21 C2 G B 598 11.740 133.678 93.140 1.00 42.17 C
ATOM 22 N2 G B 598 11.604 134.746 93.942 1.00 41.74 N
ATOM 23 N3 G B 598 12.502 133.758 92.057 1.00 42.03 N
ATOM 24 C4 G B 598 12.520 132.594 91.366 1.00 42.49 C
ATOM 25 P U B 599 18.452 131.663 90.524 1.00 46.73 P
ATOM 26 OP1 U B 599 19.883 131.932 90.247 1.00 45.83 O
ATOM 27 OP2 U B 599 17.956 130.262 90.514 1.00 45.10 O
ATOM 28 O5' U B 599 18.044 132.324 91.915 1.00 44.32 O
TER
ATOM 2 P G A 516 11.333 145.192 93.175 1.00 54.71 P
ATOM 3 OP1 G A 516 9.971 145.453 93.713 1.00 55.86 O
ATOM 4 OP2 G A 516 12.519 145.724 93.898 1.00 56.02 O
ATOM 5 O5' G A 516 11.508 143.616 93.030 1.00 52.05 O
ATOM 6 C5' G A 516 10.448 142.814 92.489 1.00 52.61 C
ATOM 7 C4' G A 516 10.869 141.371 92.411 1.00 53.40 C
ATOM 8 O4' G A 516 11.953 141.233 91.452 1.00 55.08 O
ATOM 9 C3' G A 516 11.433 140.773 93.689 1.00 53.19 C
ATOM 10 O3' G A 516 10.418 140.373 94.599 1.00 51.29 O
ATOM 11 C2' G A 516 12.232 139.595 93.149 1.00 53.77 C
ATOM 12 O2' G A 516 11.402 138.510 92.793 1.00 53.77 O
ATOM 13 C1' G A 516 12.842 140.211 91.885 1.00 53.80 C
ATOM 14 N9 G A 516 14.152 140.808 92.142 1.00 51.97 N
ATOM 15 C8 G A 516 14.438 142.132 92.387 1.00 52.15 C
ATOM 16 N7 G A 516 15.706 142.350 92.611 1.00 51.54 N
ATOM 17 C5 G A 516 16.293 141.098 92.498 1.00 50.62 C
ATOM 18 C6 G A 516 17.646 140.706 92.628 1.00 50.35 C
ATOM 19 O6 G A 516 18.631 141.408 92.881 1.00 49.58 O
ATOM 20 N1 G A 516 17.801 139.339 92.428 1.00 49.35 N
ATOM 21 C2 G A 516 16.785 138.462 92.143 1.00 48.58 C
ATOM 22 N2 G A 516 17.134 137.182 91.979 1.00 48.61 N
ATOM 23 N3 G A 516 15.521 138.813 92.025 1.00 49.03 N
ATOM 24 C4 G A 516 15.347 140.137 92.209 1.00 50.47 C
ATOM 25 P G A 517 10.632 140.591 96.178 1.00 52.53 P
ATOM 26 OP1 G A 517 9.331 140.294 96.832 1.00 53.99 O
ATOM 27 OP2 G A 517 11.279 141.908 96.415 1.00 51.01 O
ATOM 28 O5' G A 517 11.660 139.442 96.584 1.00 51.07 O
TER
ATOM 1 O3' U B 597 14.468 128.951 85.672 1.00 48.05 O
ATOM 2 P G B 598 15.565 128.798 86.840 1.00 46.86 P
ATOM 3 OP1 G B 598 16.893 128.744 86.182 1.00 47.25 O
ATOM 4 OP2 G B 598 15.158 127.701 87.751 1.00 46.39 O
ATOM 5 O5' G B 598 15.447 130.173 87.636 1.00 45.68 O
ATOM 6 C5' G B 598 15.833 131.407 87.011 1.00 43.87 C
ATOM 7 C4' G B 598 15.673 132.559 87.967 1.00 42.89 C
ATOM 8 O4' G B 598 14.270 132.832 88.179 1.00 42.76 O
ATOM 9 C3' G B 598 16.210 132.345 89.368 1.00 44.34 C
ATOM 10 O3' G B 598 17.617 132.509 89.445 1.00 46.12 O
ATOM 11 C2' G B 598 15.452 133.405 90.148 1.00 43.97 C
ATOM 12 O2' G B 598 15.968 134.702 89.942 1.00 44.72 O
ATOM 13 C1' G B 598 14.072 133.303 89.502 1.00 42.01 C
ATOM 14 N9 G B 598 13.217 132.354 90.205 1.00 41.05 N
ATOM 15 C8 G B 598 12.953 131.049 89.857 1.00 41.37 C
ATOM 16 N7 G B 598 12.156 130.446 90.697 1.00 42.06 N
ATOM 17 C5 G B 598 11.871 131.410 91.655 1.00 42.36 C
ATOM 18 C6 G B 598 11.057 131.340 92.823 1.00 42.58 C
ATOM 19 O6 G B 598 10.400 130.382 93.252 1.00 43.11 O
ATOM 20 N1 G B 598 11.054 132.547 93.517 1.00 41.55 N
ATOM 21 C2 G B 598 11.740 133.678 93.140 1.00 42.17 C
ATOM 22 N2 G B 598 11.604 134.746 93.942 1.00 41.74 N
ATOM 23 N3 G B 598 12.502 133.758 92.057 1.00 42.03 N
ATOM 24 C4 G B 598 12.520 132.594 91.366 1.00 42.49 C
ATOM 25 P U B 599 18.452 131.663 90.524 1.00 46.73 P
ATOM 26 OP1 U B 599 19.883 131.932 90.247 1.00 45.83 O
ATOM 27 OP2 U B 599 17.956 130.262 90.514 1.00 45.10 O
ATOM 28 O5' U B 599 18.044 132.324 91.915 1.00 44.32 O
TER
Atoms:
OP1: (9.971,145.453,93.713)
OP2: (12.519,145.724,93.898)
C3': (11.433,140.773,93.689)
C1': (12.842,140.211,91.885)
C5': (10.448,142.814,92.489)
O6: (18.631,141.408,92.881)
O4': (11.953,141.233,91.452)
C8: (14.438,142.132,92.387)
C2: (16.785,138.462,92.143)
C6: (17.646,140.706,92.628)
C5: (16.293,141.098,92.498)
C4: (15.347,140.137,92.209)
P: (11.333,145.192,93.175)
C4': (10.869,141.371,92.411)
C2': (12.232,139.595,93.149)
O2': (11.402,138.510,92.793)
N1: (17.801,139.339,92.428)
N2: (17.134,137.182,91.979)
N3: (15.521,138.813,92.025)
N7: (15.706,142.350,92.611)
N9: (14.152,140.808,92.142)
O5': (11.508,143.616,93.030)
O3': (10.418,140.373,94.599)
OP2: (12.519,145.724,93.898)
C3': (11.433,140.773,93.689)
C1': (12.842,140.211,91.885)
C5': (10.448,142.814,92.489)
O6: (18.631,141.408,92.881)
O4': (11.953,141.233,91.452)
C8: (14.438,142.132,92.387)
C2: (16.785,138.462,92.143)
C6: (17.646,140.706,92.628)
C5: (16.293,141.098,92.498)
C4: (15.347,140.137,92.209)
P: (11.333,145.192,93.175)
C4': (10.869,141.371,92.411)
C2': (12.232,139.595,93.149)
O2': (11.402,138.510,92.793)
N1: (17.801,139.339,92.428)
N2: (17.134,137.182,91.979)
N3: (15.521,138.813,92.025)
N7: (15.706,142.350,92.611)
N9: (14.152,140.808,92.142)
O5': (11.508,143.616,93.030)
O3': (10.418,140.373,94.599)
OP1: (16.893,128.744,86.182)
OP2: (15.158,127.701,87.751)
C3': (16.210,132.345,89.368)
C1': (14.072,133.303,89.502)
C5': (15.833,131.407,87.011)
O6: (10.400,130.382,93.252)
O4': (14.270,132.832,88.179)
C8: (12.953,131.049,89.857)
C2: (11.740,133.678,93.140)
C6: (11.057,131.340,92.823)
C5: (11.871,131.410,91.655)
C4: (12.520,132.594,91.366)
P: (15.565,128.798,86.840)
C4': (15.673,132.559,87.967)
C2': (15.452,133.405,90.148)
O2': (15.968,134.702,89.942)
N1: (11.054,132.547,93.517)
N2: (11.604,134.746,93.942)
N3: (12.502,133.758,92.057)
N7: (12.156,130.446,90.697)
N9: (13.217,132.354,90.205)
O5': (15.447,130.173,87.636)
O3': (17.617,132.509,89.445)
OP2: (15.158,127.701,87.751)
C3': (16.210,132.345,89.368)
C1': (14.072,133.303,89.502)
C5': (15.833,131.407,87.011)
O6: (10.400,130.382,93.252)
O4': (14.270,132.832,88.179)
C8: (12.953,131.049,89.857)
C2: (11.740,133.678,93.140)
C6: (11.057,131.340,92.823)
C5: (11.871,131.410,91.655)
C4: (12.520,132.594,91.366)
P: (15.565,128.798,86.840)
C4': (15.673,132.559,87.967)
C2': (15.452,133.405,90.148)
O2': (15.968,134.702,89.942)
N1: (11.054,132.547,93.517)
N2: (11.604,134.746,93.942)
N3: (12.502,133.758,92.057)
N7: (12.156,130.446,90.697)
N9: (13.217,132.354,90.205)
O5': (15.447,130.173,87.636)
O3': (17.617,132.509,89.445)
Image (generated by PyMOL):