ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01922:01951

Extra

PDB:
ATOM 1 O3' C A1921 110.982 124.380 107.661 1.00 48.53 O
ATOM 2 P G A1922 110.602 124.226 109.212 1.00 48.97 P
ATOM 3 OP1 G A1922 109.926 125.485 109.633 1.00 50.01 O
ATOM 4 OP2 G A1922 111.807 123.766 109.939 1.00 51.36 O
ATOM 5 O5' G A1922 109.546 123.033 109.248 1.00 48.49 O
ATOM 6 C5' G A1922 108.310 123.129 108.522 1.00 49.06 C
ATOM 7 C4' G A1922 107.598 121.803 108.515 1.00 47.96 C
ATOM 8 O4' G A1922 108.484 120.786 107.985 1.00 50.23 O
ATOM 9 C3' G A1922 107.179 121.260 109.866 1.00 46.62 C
ATOM 10 O3' G A1922 105.949 121.842 110.265 1.00 44.95 O
ATOM 11 C2' G A1922 107.052 119.772 109.578 1.00 48.33 C
ATOM 12 O2' G A1922 105.873 119.476 108.857 1.00 46.65 O
ATOM 13 C1' G A1922 108.243 119.553 108.643 1.00 51.26 C
ATOM 14 N9 G A1922 109.478 119.155 109.313 1.00 54.78 N
ATOM 15 C8 G A1922 110.606 119.922 109.472 1.00 56.52 C
ATOM 16 N7 G A1922 111.569 119.298 110.089 1.00 57.50 N
ATOM 17 C5 G A1922 111.046 118.044 110.360 1.00 57.15 C
ATOM 18 C6 G A1922 111.632 116.937 111.007 1.00 59.10 C
ATOM 19 O6 G A1922 112.775 116.838 111.482 1.00 61.53 O
ATOM 20 N1 G A1922 110.749 115.862 111.079 1.00 58.02 N
ATOM 21 C2 G A1922 109.469 115.858 110.591 1.00 56.39 C
ATOM 22 N2 G A1922 108.772 114.728 110.778 1.00 55.76 N
ATOM 23 N3 G A1922 108.914 116.885 109.973 1.00 56.50 N
ATOM 24 C4 G A1922 109.753 117.939 109.894 1.00 56.04 C
ATOM 25 P U A1923 105.412 121.627 111.763 1.00 46.58 P
ATOM 26 OP1 U A1923 104.479 122.737 112.098 1.00 45.89 O
ATOM 27 OP2 U A1923 106.578 121.365 112.641 1.00 47.41 O
ATOM 28 O5' U A1923 104.563 120.283 111.678 1.00 45.71 O
TER

ATOM 1 O3' U B1950 106.890 109.561 111.212 1.00 79.33 O
ATOM 2 P G B1951 105.288 109.497 111.081 1.00 76.88 P
ATOM 3 OP1 G B1951 104.727 108.696 112.202 1.00 77.00 O
ATOM 4 OP2 G B1951 105.019 109.076 109.679 1.00 77.19 O
ATOM 5 O5' G B1951 104.816 111.007 111.292 1.00 72.20 O
ATOM 6 C5' G B1951 105.615 112.105 110.816 1.00 62.99 C
ATOM 7 C4' G B1951 104.981 112.728 109.590 1.00 56.64 C
ATOM 8 O4' G B1951 105.928 113.666 109.020 1.00 54.92 O
ATOM 9 C3' G B1951 104.656 111.764 108.454 1.00 52.79 C
ATOM 10 O3' G B1951 103.647 112.322 107.615 1.00 50.36 O
ATOM 11 C2' G B1951 105.985 111.697 107.717 1.00 51.25 C
ATOM 12 O2' G B1951 105.854 111.299 106.376 1.00 51.58 O
ATOM 13 C1' G B1951 106.461 113.143 107.820 1.00 52.14 C
ATOM 14 N9 G B1951 107.910 113.316 107.868 1.00 52.11 N
ATOM 15 C8 G B1951 108.847 112.435 108.355 1.00 51.59 C
ATOM 16 N7 G B1951 110.067 112.890 108.275 1.00 51.67 N
ATOM 17 C5 G B1951 109.929 114.145 107.699 1.00 51.98 C
ATOM 18 C6 G B1951 110.905 115.115 107.367 1.00 52.79 C
ATOM 19 O6 G B1951 112.129 115.056 107.511 1.00 55.50 O
ATOM 20 N1 G B1951 110.330 116.248 106.810 1.00 52.73 N
ATOM 21 C2 G B1951 108.991 116.427 106.593 1.00 51.57 C
ATOM 22 N2 G B1951 108.636 117.592 106.044 1.00 50.38 N
ATOM 23 N3 G B1951 108.070 115.531 106.891 1.00 51.29 N
ATOM 24 C4 G B1951 108.606 114.421 107.439 1.00 51.75 C
ATOM 25 P C B1952 102.090 112.058 107.930 1.00 50.01 P
ATOM 26 OP1 C B1952 101.308 113.024 107.119 1.00 47.81 O
ATOM 27 OP2 C B1952 101.905 112.027 109.403 1.00 50.33 O
ATOM 28 O5' C B1952 101.802 110.592 107.369 1.00 51.84 O
TER

Atoms:
OP1: (109.926,125.485,109.633)
OP2: (111.807,123.766,109.939)
C3': (107.179,121.260,109.866)
C1': (108.243,119.553,108.643)
C5': (108.310,123.129,108.522)
O6: (112.775,116.838,111.482)
O4': (108.484,120.786,107.985)
C8: (110.606,119.922,109.472)
C2: (109.469,115.858,110.591)
C6: (111.632,116.937,111.007)
C5: (111.046,118.044,110.360)
C4: (109.753,117.939,109.894)
P: (110.602,124.226,109.212)
C4': (107.598,121.803,108.515)
C2': (107.052,119.772,109.578)
O2': (105.873,119.476,108.857)
N1: (110.749,115.862,111.079)
N2: (108.772,114.728,110.778)
N3: (108.914,116.885,109.973)
N7: (111.569,119.298,110.089)
N9: (109.478,119.155,109.313)
O5': (109.546,123.033,109.248)
O3': (105.949,121.842,110.265)
OP1: (104.727,108.696,112.202)
OP2: (105.019,109.076,109.679)
C3': (104.656,111.764,108.454)
C1': (106.461,113.143,107.820)
C5': (105.615,112.105,110.816)
O6: (112.129,115.056,107.511)
O4': (105.928,113.666,109.020)
C8: (108.847,112.435,108.355)
C2: (108.991,116.427,106.593)
C6: (110.905,115.115,107.367)
C5: (109.929,114.145,107.699)
C4: (108.606,114.421,107.439)
P: (105.288,109.497,111.081)
C4': (104.981,112.728,109.590)
C2': (105.985,111.697,107.717)
O2': (105.854,111.299,106.376)
N1: (110.330,116.248,106.810)
N2: (108.636,117.592,106.044)
N3: (108.070,115.531,106.891)
N7: (110.067,112.890,108.275)
N9: (107.910,113.316,107.868)
O5': (104.816,111.007,111.292)
O3': (103.647,112.322,107.615)
Image (generated by PyMOL):
PyMOL image
show in jmol