Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A516:A598
Extra
PDB:
ATOM 1 O3' U A 515 11.480 145.632 91.887 1.00 53.41 O
ATOM 2 P G A 516 11.387 145.090 93.390 1.00 53.30 P
ATOM 3 OP1 G A 516 9.984 145.324 93.802 1.00 53.38 O
ATOM 4 OP2 G A 516 12.490 145.714 94.161 1.00 53.43 O
ATOM 5 O5' G A 516 11.657 143.526 93.237 1.00 52.62 O
ATOM 6 C5' G A 516 10.658 142.675 92.633 1.00 55.48 C
ATOM 7 C4' G A 516 11.082 141.221 92.665 1.00 56.84 C
ATOM 8 O4' G A 516 12.168 141.005 91.730 1.00 57.53 O
ATOM 9 C3' G A 516 11.608 140.684 93.984 1.00 56.50 C
ATOM 10 O3' G A 516 10.559 140.329 94.864 1.00 54.78 O
ATOM 11 C2' G A 516 12.425 139.481 93.536 1.00 56.85 C
ATOM 12 O2' G A 516 11.612 138.354 93.263 1.00 60.66 O
ATOM 13 C1' G A 516 13.041 140.017 92.239 1.00 56.06 C
ATOM 14 N9 G A 516 14.338 140.644 92.448 1.00 54.47 N
ATOM 15 C8 G A 516 14.604 141.980 92.664 1.00 55.13 C
ATOM 16 N7 G A 516 15.870 142.221 92.860 1.00 54.34 N
ATOM 17 C5 G A 516 16.470 140.972 92.758 1.00 54.36 C
ATOM 18 C6 G A 516 17.818 140.596 92.887 1.00 54.17 C
ATOM 19 O6 G A 516 18.783 141.315 93.165 1.00 53.56 O
ATOM 20 N1 G A 516 17.993 139.228 92.670 1.00 52.68 N
ATOM 21 C2 G A 516 16.984 138.340 92.386 1.00 52.72 C
ATOM 22 N2 G A 516 17.335 137.072 92.181 1.00 52.94 N
ATOM 23 N3 G A 516 15.720 138.675 92.299 1.00 53.24 N
ATOM 24 C4 G A 516 15.535 139.997 92.487 1.00 54.12 C
ATOM 25 P G A 517 10.767 140.511 96.441 1.00 55.06 P
ATOM 26 OP1 G A 517 9.484 140.216 97.142 1.00 54.60 O
ATOM 27 OP2 G A 517 11.412 141.829 96.628 1.00 53.24 O
ATOM 28 O5' G A 517 11.822 139.380 96.815 1.00 53.24 O
TER
ATOM 1 O3' U B 597 14.671 128.853 85.868 1.00 46.83 O
ATOM 2 P G B 598 15.794 128.714 87.009 1.00 47.20 P
ATOM 3 OP1 G B 598 17.087 128.633 86.284 1.00 45.22 O
ATOM 4 OP2 G B 598 15.388 127.604 87.906 1.00 47.63 O
ATOM 5 O5' G B 598 15.675 130.073 87.847 1.00 44.35 O
ATOM 6 C5' G B 598 16.077 131.348 87.286 1.00 42.45 C
ATOM 7 C4' G B 598 15.858 132.477 88.278 1.00 40.81 C
ATOM 8 O4' G B 598 14.448 132.723 88.483 1.00 39.39 O
ATOM 9 C3' G B 598 16.391 132.316 89.687 1.00 40.78 C
ATOM 10 O3' G B 598 17.783 132.534 89.772 1.00 42.55 O
ATOM 11 C2' G B 598 15.610 133.386 90.434 1.00 39.65 C
ATOM 12 O2' G B 598 16.052 134.708 90.206 1.00 40.92 O
ATOM 13 C1' G B 598 14.240 133.234 89.790 1.00 38.18 C
ATOM 14 N9 G B 598 13.397 132.297 90.521 1.00 35.70 N
ATOM 15 C8 G B 598 13.075 131.015 90.153 1.00 35.03 C
ATOM 16 N7 G B 598 12.246 130.437 90.977 1.00 34.95 N
ATOM 17 C5 G B 598 12.020 131.388 91.960 1.00 35.08 C
ATOM 18 C6 G B 598 11.184 131.342 93.106 1.00 34.61 C
ATOM 19 O6 G B 598 10.472 130.417 93.499 1.00 34.90 O
ATOM 20 N1 G B 598 11.226 132.535 93.817 1.00 33.39 N
ATOM 21 C2 G B 598 11.984 133.635 93.474 1.00 34.28 C
ATOM 22 N2 G B 598 11.868 134.720 94.267 1.00 32.97 N
ATOM 23 N3 G B 598 12.786 133.680 92.422 1.00 33.50 N
ATOM 24 C4 G B 598 12.743 132.535 91.707 1.00 34.77 C
ATOM 25 P U B 599 18.657 131.652 90.780 1.00 42.91 P
ATOM 26 OP1 U B 599 20.061 131.978 90.477 1.00 42.37 O
ATOM 27 OP2 U B 599 18.195 130.242 90.694 1.00 43.60 O
ATOM 28 O5' U B 599 18.293 132.235 92.214 1.00 40.86 O
TER
ATOM 2 P G A 516 11.387 145.090 93.390 1.00 53.30 P
ATOM 3 OP1 G A 516 9.984 145.324 93.802 1.00 53.38 O
ATOM 4 OP2 G A 516 12.490 145.714 94.161 1.00 53.43 O
ATOM 5 O5' G A 516 11.657 143.526 93.237 1.00 52.62 O
ATOM 6 C5' G A 516 10.658 142.675 92.633 1.00 55.48 C
ATOM 7 C4' G A 516 11.082 141.221 92.665 1.00 56.84 C
ATOM 8 O4' G A 516 12.168 141.005 91.730 1.00 57.53 O
ATOM 9 C3' G A 516 11.608 140.684 93.984 1.00 56.50 C
ATOM 10 O3' G A 516 10.559 140.329 94.864 1.00 54.78 O
ATOM 11 C2' G A 516 12.425 139.481 93.536 1.00 56.85 C
ATOM 12 O2' G A 516 11.612 138.354 93.263 1.00 60.66 O
ATOM 13 C1' G A 516 13.041 140.017 92.239 1.00 56.06 C
ATOM 14 N9 G A 516 14.338 140.644 92.448 1.00 54.47 N
ATOM 15 C8 G A 516 14.604 141.980 92.664 1.00 55.13 C
ATOM 16 N7 G A 516 15.870 142.221 92.860 1.00 54.34 N
ATOM 17 C5 G A 516 16.470 140.972 92.758 1.00 54.36 C
ATOM 18 C6 G A 516 17.818 140.596 92.887 1.00 54.17 C
ATOM 19 O6 G A 516 18.783 141.315 93.165 1.00 53.56 O
ATOM 20 N1 G A 516 17.993 139.228 92.670 1.00 52.68 N
ATOM 21 C2 G A 516 16.984 138.340 92.386 1.00 52.72 C
ATOM 22 N2 G A 516 17.335 137.072 92.181 1.00 52.94 N
ATOM 23 N3 G A 516 15.720 138.675 92.299 1.00 53.24 N
ATOM 24 C4 G A 516 15.535 139.997 92.487 1.00 54.12 C
ATOM 25 P G A 517 10.767 140.511 96.441 1.00 55.06 P
ATOM 26 OP1 G A 517 9.484 140.216 97.142 1.00 54.60 O
ATOM 27 OP2 G A 517 11.412 141.829 96.628 1.00 53.24 O
ATOM 28 O5' G A 517 11.822 139.380 96.815 1.00 53.24 O
TER
ATOM 1 O3' U B 597 14.671 128.853 85.868 1.00 46.83 O
ATOM 2 P G B 598 15.794 128.714 87.009 1.00 47.20 P
ATOM 3 OP1 G B 598 17.087 128.633 86.284 1.00 45.22 O
ATOM 4 OP2 G B 598 15.388 127.604 87.906 1.00 47.63 O
ATOM 5 O5' G B 598 15.675 130.073 87.847 1.00 44.35 O
ATOM 6 C5' G B 598 16.077 131.348 87.286 1.00 42.45 C
ATOM 7 C4' G B 598 15.858 132.477 88.278 1.00 40.81 C
ATOM 8 O4' G B 598 14.448 132.723 88.483 1.00 39.39 O
ATOM 9 C3' G B 598 16.391 132.316 89.687 1.00 40.78 C
ATOM 10 O3' G B 598 17.783 132.534 89.772 1.00 42.55 O
ATOM 11 C2' G B 598 15.610 133.386 90.434 1.00 39.65 C
ATOM 12 O2' G B 598 16.052 134.708 90.206 1.00 40.92 O
ATOM 13 C1' G B 598 14.240 133.234 89.790 1.00 38.18 C
ATOM 14 N9 G B 598 13.397 132.297 90.521 1.00 35.70 N
ATOM 15 C8 G B 598 13.075 131.015 90.153 1.00 35.03 C
ATOM 16 N7 G B 598 12.246 130.437 90.977 1.00 34.95 N
ATOM 17 C5 G B 598 12.020 131.388 91.960 1.00 35.08 C
ATOM 18 C6 G B 598 11.184 131.342 93.106 1.00 34.61 C
ATOM 19 O6 G B 598 10.472 130.417 93.499 1.00 34.90 O
ATOM 20 N1 G B 598 11.226 132.535 93.817 1.00 33.39 N
ATOM 21 C2 G B 598 11.984 133.635 93.474 1.00 34.28 C
ATOM 22 N2 G B 598 11.868 134.720 94.267 1.00 32.97 N
ATOM 23 N3 G B 598 12.786 133.680 92.422 1.00 33.50 N
ATOM 24 C4 G B 598 12.743 132.535 91.707 1.00 34.77 C
ATOM 25 P U B 599 18.657 131.652 90.780 1.00 42.91 P
ATOM 26 OP1 U B 599 20.061 131.978 90.477 1.00 42.37 O
ATOM 27 OP2 U B 599 18.195 130.242 90.694 1.00 43.60 O
ATOM 28 O5' U B 599 18.293 132.235 92.214 1.00 40.86 O
TER
Atoms:
OP1: (9.984,145.324,93.802)
OP2: (12.490,145.714,94.161)
C3': (11.608,140.684,93.984)
C1': (13.041,140.017,92.239)
C5': (10.658,142.675,92.633)
O6: (18.783,141.315,93.165)
O4': (12.168,141.005,91.730)
C8: (14.604,141.980,92.664)
C2: (16.984,138.340,92.386)
C6: (17.818,140.596,92.887)
C5: (16.470,140.972,92.758)
C4: (15.535,139.997,92.487)
P: (11.387,145.090,93.390)
C4': (11.082,141.221,92.665)
C2': (12.425,139.481,93.536)
O2': (11.612,138.354,93.263)
N1: (17.993,139.228,92.670)
N2: (17.335,137.072,92.181)
N3: (15.720,138.675,92.299)
N7: (15.870,142.221,92.860)
N9: (14.338,140.644,92.448)
O5': (11.657,143.526,93.237)
O3': (10.559,140.329,94.864)
OP2: (12.490,145.714,94.161)
C3': (11.608,140.684,93.984)
C1': (13.041,140.017,92.239)
C5': (10.658,142.675,92.633)
O6: (18.783,141.315,93.165)
O4': (12.168,141.005,91.730)
C8: (14.604,141.980,92.664)
C2: (16.984,138.340,92.386)
C6: (17.818,140.596,92.887)
C5: (16.470,140.972,92.758)
C4: (15.535,139.997,92.487)
P: (11.387,145.090,93.390)
C4': (11.082,141.221,92.665)
C2': (12.425,139.481,93.536)
O2': (11.612,138.354,93.263)
N1: (17.993,139.228,92.670)
N2: (17.335,137.072,92.181)
N3: (15.720,138.675,92.299)
N7: (15.870,142.221,92.860)
N9: (14.338,140.644,92.448)
O5': (11.657,143.526,93.237)
O3': (10.559,140.329,94.864)
OP1: (17.087,128.633,86.284)
OP2: (15.388,127.604,87.906)
C3': (16.391,132.316,89.687)
C1': (14.240,133.234,89.790)
C5': (16.077,131.348,87.286)
O6: (10.472,130.417,93.499)
O4': (14.448,132.723,88.483)
C8: (13.075,131.015,90.153)
C2: (11.984,133.635,93.474)
C6: (11.184,131.342,93.106)
C5: (12.020,131.388,91.960)
C4: (12.743,132.535,91.707)
P: (15.794,128.714,87.009)
C4': (15.858,132.477,88.278)
C2': (15.610,133.386,90.434)
O2': (16.052,134.708,90.206)
N1: (11.226,132.535,93.817)
N2: (11.868,134.720,94.267)
N3: (12.786,133.680,92.422)
N7: (12.246,130.437,90.977)
N9: (13.397,132.297,90.521)
O5': (15.675,130.073,87.847)
O3': (17.783,132.534,89.772)
OP2: (15.388,127.604,87.906)
C3': (16.391,132.316,89.687)
C1': (14.240,133.234,89.790)
C5': (16.077,131.348,87.286)
O6: (10.472,130.417,93.499)
O4': (14.448,132.723,88.483)
C8: (13.075,131.015,90.153)
C2: (11.984,133.635,93.474)
C6: (11.184,131.342,93.106)
C5: (12.020,131.388,91.960)
C4: (12.743,132.535,91.707)
P: (15.794,128.714,87.009)
C4': (15.858,132.477,88.278)
C2': (15.610,133.386,90.434)
O2': (16.052,134.708,90.206)
N1: (11.226,132.535,93.817)
N2: (11.868,134.720,94.267)
N3: (12.786,133.680,92.422)
N7: (12.246,130.437,90.977)
N9: (13.397,132.297,90.521)
O5': (15.675,130.073,87.847)
O3': (17.783,132.534,89.772)
Image (generated by PyMOL):