Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1925:A1965
Extra
PDB:
ATOM 1 O3' A A1924 -33.566 112.922 109.397 1.00 7.25 O
ATOM 2 P G A1925 -34.105 111.628 110.155 1.00 2.64 P
ATOM 3 OP1 G A1925 -33.520 110.467 109.462 1.00 2.64 O
ATOM 4 OP2 G A1925 -35.600 111.750 110.249 1.00 2.64 O
ATOM 5 O5' G A1925 -33.459 111.773 111.600 1.00 2.64 O
ATOM 6 C5' G A1925 -32.081 112.055 111.736 1.00 2.64 C
ATOM 7 C4' G A1925 -31.731 112.503 113.133 1.00 2.64 C
ATOM 8 O4' G A1925 -32.152 113.870 113.351 1.00 2.64 O
ATOM 9 C3' G A1925 -32.384 111.752 114.272 1.00 2.64 C
ATOM 10 O3' G A1925 -31.776 110.516 114.526 1.00 2.64 O
ATOM 11 C2' G A1925 -32.218 112.742 115.403 1.00 2.64 C
ATOM 12 O2' G A1925 -30.857 112.824 115.799 1.00 2.64 O
ATOM 13 C1' G A1925 -32.580 114.019 114.684 1.00 2.64 C
ATOM 14 N9 G A1925 -34.018 114.222 114.656 1.00 2.40 N
ATOM 15 C8 G A1925 -34.805 113.804 113.641 1.00 2.40 C
ATOM 16 N7 G A1925 -36.046 114.122 113.823 1.00 2.40 N
ATOM 17 C5 G A1925 -36.059 114.780 115.022 1.00 2.40 C
ATOM 18 C6 G A1925 -37.147 115.344 115.710 1.00 2.40 C
ATOM 19 O6 G A1925 -38.331 115.360 115.342 1.00 2.40 O
ATOM 20 N1 G A1925 -36.720 115.926 116.914 1.00 2.40 N
ATOM 21 C2 G A1925 -35.418 115.954 117.360 1.00 2.40 C
ATOM 22 N2 G A1925 -35.210 116.559 118.514 1.00 2.40 N
ATOM 23 N3 G A1925 -34.392 115.424 116.721 1.00 2.40 N
ATOM 24 C4 G A1925 -34.798 114.859 115.562 1.00 2.40 C
ATOM 25 P C A1926 -32.500 109.450 115.446 1.00 0.01 P
ATOM 26 OP1 C A1926 -31.485 108.398 115.770 1.00 0.01 O
ATOM 27 OP2 C A1926 -33.741 109.077 114.740 1.00 0.01 O
ATOM 28 O5' C A1926 -32.866 110.284 116.751 1.00 0.01 O
TER
ATOM 1 O3' G B1964 -29.834 122.347 122.503 1.00 8.24 O
ATOM 2 P G B1965 -29.591 120.826 122.935 1.00 0.96 P
ATOM 3 OP1 G B1965 -30.485 120.543 124.082 1.00 0.96 O
ATOM 4 OP2 G B1965 -28.125 120.656 123.124 1.00 0.96 O
ATOM 5 O5' G B1965 -30.077 120.003 121.646 1.00 0.96 O
ATOM 6 C5' G B1965 -31.357 120.216 121.046 1.00 0.96 C
ATOM 7 C4' G B1965 -31.526 119.379 119.790 1.00 0.96 C
ATOM 8 O4' G B1965 -30.790 119.979 118.690 1.00 0.96 O
ATOM 9 C3' G B1965 -30.961 117.971 119.853 1.00 0.96 C
ATOM 10 O3' G B1965 -31.809 117.063 120.489 1.00 0.96 O
ATOM 11 C2' G B1965 -30.720 117.642 118.401 1.00 0.96 C
ATOM 12 O2' G B1965 -31.942 117.377 117.743 1.00 0.96 O
ATOM 13 C1' G B1965 -30.200 118.959 117.896 1.00 0.96 C
ATOM 14 N9 G B1965 -28.736 119.052 118.003 1.00 0.76 N
ATOM 15 C8 G B1965 -28.001 119.715 118.935 1.00 0.76 C
ATOM 16 N7 G B1965 -26.720 119.648 118.709 1.00 0.76 N
ATOM 17 C5 G B1965 -26.613 118.901 117.557 1.00 0.76 C
ATOM 18 C6 G B1965 -25.473 118.515 116.843 1.00 0.76 C
ATOM 19 O6 G B1965 -24.292 118.758 117.097 1.00 0.76 O
ATOM 20 N1 G B1965 -25.818 117.771 115.740 1.00 0.76 N
ATOM 21 C2 G B1965 -27.094 117.456 115.383 1.00 0.76 C
ATOM 22 N2 G B1965 -27.238 116.713 114.282 1.00 0.76 N
ATOM 23 N3 G B1965 -28.166 117.812 116.051 1.00 0.76 N
ATOM 24 C4 G B1965 -27.845 118.534 117.116 1.00 0.76 C
ATOM 25 P C B1966 -31.197 116.076 121.570 1.00 0.01 P
ATOM 26 OP1 C B1966 -32.211 115.922 122.637 1.00 0.01 O
ATOM 27 OP2 C B1966 -29.845 116.603 121.922 1.00 0.01 O
ATOM 28 O5' C B1966 -31.040 114.728 120.774 1.00 0.01 O
TER
ATOM 2 P G A1925 -34.105 111.628 110.155 1.00 2.64 P
ATOM 3 OP1 G A1925 -33.520 110.467 109.462 1.00 2.64 O
ATOM 4 OP2 G A1925 -35.600 111.750 110.249 1.00 2.64 O
ATOM 5 O5' G A1925 -33.459 111.773 111.600 1.00 2.64 O
ATOM 6 C5' G A1925 -32.081 112.055 111.736 1.00 2.64 C
ATOM 7 C4' G A1925 -31.731 112.503 113.133 1.00 2.64 C
ATOM 8 O4' G A1925 -32.152 113.870 113.351 1.00 2.64 O
ATOM 9 C3' G A1925 -32.384 111.752 114.272 1.00 2.64 C
ATOM 10 O3' G A1925 -31.776 110.516 114.526 1.00 2.64 O
ATOM 11 C2' G A1925 -32.218 112.742 115.403 1.00 2.64 C
ATOM 12 O2' G A1925 -30.857 112.824 115.799 1.00 2.64 O
ATOM 13 C1' G A1925 -32.580 114.019 114.684 1.00 2.64 C
ATOM 14 N9 G A1925 -34.018 114.222 114.656 1.00 2.40 N
ATOM 15 C8 G A1925 -34.805 113.804 113.641 1.00 2.40 C
ATOM 16 N7 G A1925 -36.046 114.122 113.823 1.00 2.40 N
ATOM 17 C5 G A1925 -36.059 114.780 115.022 1.00 2.40 C
ATOM 18 C6 G A1925 -37.147 115.344 115.710 1.00 2.40 C
ATOM 19 O6 G A1925 -38.331 115.360 115.342 1.00 2.40 O
ATOM 20 N1 G A1925 -36.720 115.926 116.914 1.00 2.40 N
ATOM 21 C2 G A1925 -35.418 115.954 117.360 1.00 2.40 C
ATOM 22 N2 G A1925 -35.210 116.559 118.514 1.00 2.40 N
ATOM 23 N3 G A1925 -34.392 115.424 116.721 1.00 2.40 N
ATOM 24 C4 G A1925 -34.798 114.859 115.562 1.00 2.40 C
ATOM 25 P C A1926 -32.500 109.450 115.446 1.00 0.01 P
ATOM 26 OP1 C A1926 -31.485 108.398 115.770 1.00 0.01 O
ATOM 27 OP2 C A1926 -33.741 109.077 114.740 1.00 0.01 O
ATOM 28 O5' C A1926 -32.866 110.284 116.751 1.00 0.01 O
TER
ATOM 1 O3' G B1964 -29.834 122.347 122.503 1.00 8.24 O
ATOM 2 P G B1965 -29.591 120.826 122.935 1.00 0.96 P
ATOM 3 OP1 G B1965 -30.485 120.543 124.082 1.00 0.96 O
ATOM 4 OP2 G B1965 -28.125 120.656 123.124 1.00 0.96 O
ATOM 5 O5' G B1965 -30.077 120.003 121.646 1.00 0.96 O
ATOM 6 C5' G B1965 -31.357 120.216 121.046 1.00 0.96 C
ATOM 7 C4' G B1965 -31.526 119.379 119.790 1.00 0.96 C
ATOM 8 O4' G B1965 -30.790 119.979 118.690 1.00 0.96 O
ATOM 9 C3' G B1965 -30.961 117.971 119.853 1.00 0.96 C
ATOM 10 O3' G B1965 -31.809 117.063 120.489 1.00 0.96 O
ATOM 11 C2' G B1965 -30.720 117.642 118.401 1.00 0.96 C
ATOM 12 O2' G B1965 -31.942 117.377 117.743 1.00 0.96 O
ATOM 13 C1' G B1965 -30.200 118.959 117.896 1.00 0.96 C
ATOM 14 N9 G B1965 -28.736 119.052 118.003 1.00 0.76 N
ATOM 15 C8 G B1965 -28.001 119.715 118.935 1.00 0.76 C
ATOM 16 N7 G B1965 -26.720 119.648 118.709 1.00 0.76 N
ATOM 17 C5 G B1965 -26.613 118.901 117.557 1.00 0.76 C
ATOM 18 C6 G B1965 -25.473 118.515 116.843 1.00 0.76 C
ATOM 19 O6 G B1965 -24.292 118.758 117.097 1.00 0.76 O
ATOM 20 N1 G B1965 -25.818 117.771 115.740 1.00 0.76 N
ATOM 21 C2 G B1965 -27.094 117.456 115.383 1.00 0.76 C
ATOM 22 N2 G B1965 -27.238 116.713 114.282 1.00 0.76 N
ATOM 23 N3 G B1965 -28.166 117.812 116.051 1.00 0.76 N
ATOM 24 C4 G B1965 -27.845 118.534 117.116 1.00 0.76 C
ATOM 25 P C B1966 -31.197 116.076 121.570 1.00 0.01 P
ATOM 26 OP1 C B1966 -32.211 115.922 122.637 1.00 0.01 O
ATOM 27 OP2 C B1966 -29.845 116.603 121.922 1.00 0.01 O
ATOM 28 O5' C B1966 -31.040 114.728 120.774 1.00 0.01 O
TER
Atoms:
OP1: (-33.520,110.467,109.462)
OP2: (-35.600,111.750,110.249)
C3': (-32.384,111.752,114.272)
C1': (-32.580,114.019,114.684)
C5': (-32.081,112.055,111.736)
O6: (-38.331,115.360,115.342)
O4': (-32.152,113.870,113.351)
C8: (-34.805,113.804,113.641)
C2: (-35.418,115.954,117.360)
C6: (-37.147,115.344,115.710)
C5: (-36.059,114.780,115.022)
C4: (-34.798,114.859,115.562)
P: (-34.105,111.628,110.155)
C4': (-31.731,112.503,113.133)
C2': (-32.218,112.742,115.403)
O2': (-30.857,112.824,115.799)
N1: (-36.720,115.926,116.914)
N2: (-35.210,116.559,118.514)
N3: (-34.392,115.424,116.721)
N7: (-36.046,114.122,113.823)
N9: (-34.018,114.222,114.656)
O5': (-33.459,111.773,111.600)
O3': (-31.776,110.516,114.526)
OP2: (-35.600,111.750,110.249)
C3': (-32.384,111.752,114.272)
C1': (-32.580,114.019,114.684)
C5': (-32.081,112.055,111.736)
O6: (-38.331,115.360,115.342)
O4': (-32.152,113.870,113.351)
C8: (-34.805,113.804,113.641)
C2: (-35.418,115.954,117.360)
C6: (-37.147,115.344,115.710)
C5: (-36.059,114.780,115.022)
C4: (-34.798,114.859,115.562)
P: (-34.105,111.628,110.155)
C4': (-31.731,112.503,113.133)
C2': (-32.218,112.742,115.403)
O2': (-30.857,112.824,115.799)
N1: (-36.720,115.926,116.914)
N2: (-35.210,116.559,118.514)
N3: (-34.392,115.424,116.721)
N7: (-36.046,114.122,113.823)
N9: (-34.018,114.222,114.656)
O5': (-33.459,111.773,111.600)
O3': (-31.776,110.516,114.526)
OP1: (-30.485,120.543,124.082)
OP2: (-28.125,120.656,123.124)
C3': (-30.961,117.971,119.853)
C1': (-30.200,118.959,117.896)
C5': (-31.357,120.216,121.046)
O6: (-24.292,118.758,117.097)
O4': (-30.790,119.979,118.690)
C8: (-28.001,119.715,118.935)
C2: (-27.094,117.456,115.383)
C6: (-25.473,118.515,116.843)
C5: (-26.613,118.901,117.557)
C4: (-27.845,118.534,117.116)
P: (-29.591,120.826,122.935)
C4': (-31.526,119.379,119.790)
C2': (-30.720,117.642,118.401)
O2': (-31.942,117.377,117.743)
N1: (-25.818,117.771,115.740)
N2: (-27.238,116.713,114.282)
N3: (-28.166,117.812,116.051)
N7: (-26.720,119.648,118.709)
N9: (-28.736,119.052,118.003)
O5': (-30.077,120.003,121.646)
O3': (-31.809,117.063,120.489)
OP2: (-28.125,120.656,123.124)
C3': (-30.961,117.971,119.853)
C1': (-30.200,118.959,117.896)
C5': (-31.357,120.216,121.046)
O6: (-24.292,118.758,117.097)
O4': (-30.790,119.979,118.690)
C8: (-28.001,119.715,118.935)
C2: (-27.094,117.456,115.383)
C6: (-25.473,118.515,116.843)
C5: (-26.613,118.901,117.557)
C4: (-27.845,118.534,117.116)
P: (-29.591,120.826,122.935)
C4': (-31.526,119.379,119.790)
C2': (-30.720,117.642,118.401)
O2': (-31.942,117.377,117.743)
N1: (-25.818,117.771,115.740)
N2: (-27.238,116.713,114.282)
N3: (-28.166,117.812,116.051)
N7: (-26.720,119.648,118.709)
N9: (-28.736,119.052,118.003)
O5': (-30.077,120.003,121.646)
O3': (-31.809,117.063,120.489)
Image (generated by PyMOL):