ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWI:B9:B31

Extra

PDB:
ATOM 1 O3' A A 8 -7.673 -43.372 24.822 1.00 53.26 O
ATOM 2 P G A 9 -7.283 -43.637 26.354 1.00 53.60 P
ATOM 3 OP1 G A 9 -6.617 -44.958 26.435 1.00 53.61 O
ATOM 4 OP2 G A 9 -8.455 -43.376 27.225 1.00 53.69 O
ATOM 5 O5' G A 9 -6.226 -42.464 26.599 1.00 52.45 O
ATOM 6 C5' G A 9 -4.933 -42.481 26.003 1.00 51.66 C
ATOM 7 C4' G A 9 -4.212 -41.194 26.354 1.00 51.21 C
ATOM 8 O4' G A 9 -4.990 -40.077 25.872 1.00 51.12 O
ATOM 9 C3' G A 9 -4.079 -40.947 27.846 1.00 51.49 C
ATOM 10 O3' G A 9 -2.879 -41.536 28.304 1.00 52.26 O
ATOM 11 C2' G A 9 -4.065 -39.426 27.941 1.00 51.14 C
ATOM 12 O2' G A 9 -2.795 -38.871 27.667 1.00 51.15 O
ATOM 13 C1' G A 9 -5.009 -39.025 26.817 1.00 50.60 C
ATOM 14 N9 G A 9 -6.401 -38.762 27.186 1.00 50.02 N
ATOM 15 C8 G A 9 -7.419 -39.680 27.332 1.00 50.14 C
ATOM 16 N7 G A 9 -8.570 -39.152 27.645 1.00 49.90 N
ATOM 17 C5 G A 9 -8.300 -37.791 27.705 1.00 49.73 C
ATOM 18 C6 G A 9 -9.158 -36.710 28.008 1.00 49.80 C
ATOM 19 O6 G A 9 -10.364 -36.761 28.282 1.00 50.73 O
ATOM 20 N1 G A 9 -8.499 -35.482 27.965 1.00 49.73 N
ATOM 21 C2 G A 9 -7.159 -35.324 27.668 1.00 49.73 C
ATOM 22 N2 G A 9 -6.676 -34.071 27.666 1.00 49.69 N
ATOM 23 N3 G A 9 -6.343 -36.333 27.387 1.00 49.42 N
ATOM 24 C4 G A 9 -6.974 -37.534 27.426 1.00 49.65 C
ATOM 25 P A A 10 -2.914 -42.802 29.287 1.00 53.42 P
ATOM 26 OP1 A A 10 -1.795 -43.690 28.891 1.00 53.13 O
ATOM 27 OP2 A A 10 -4.293 -43.346 29.382 1.00 52.80 O
ATOM 28 O5' A A 10 -2.545 -42.131 30.689 1.00 53.67 O
TER

ATOM 1 O3' C B 30 -0.934 -36.328 27.176 1.00 51.11 O
ATOM 2 P G B 31 -0.527 -35.457 25.899 1.00 50.43 P
ATOM 3 OP1 G B 31 -0.171 -36.435 24.847 1.00 51.13 O
ATOM 4 OP2 G B 31 0.443 -34.405 26.267 1.00 49.74 O
ATOM 5 O5' G B 31 -1.900 -34.729 25.524 1.00 50.51 O
ATOM 6 C5' G B 31 -3.055 -35.460 25.106 1.00 50.63 C
ATOM 7 C4' G B 31 -4.198 -34.510 24.775 1.00 51.02 C
ATOM 8 O4' G B 31 -4.540 -33.692 25.933 1.00 51.29 O
ATOM 9 C3' G B 31 -3.873 -33.528 23.656 1.00 51.17 C
ATOM 10 O3' G B 31 -5.019 -33.302 22.845 1.00 51.28 O
ATOM 11 C2' G B 31 -3.482 -32.287 24.452 1.00 51.75 C
ATOM 12 O2' G B 31 -3.539 -31.082 23.715 1.00 53.07 O
ATOM 13 C1' G B 31 -4.558 -32.339 25.524 1.00 51.82 C
ATOM 14 N9 G B 31 -4.329 -31.412 26.630 1.00 52.51 N
ATOM 15 C8 G B 31 -5.237 -30.494 27.100 1.00 53.09 C
ATOM 16 N7 G B 31 -4.794 -29.770 28.089 1.00 53.24 N
ATOM 17 C5 G B 31 -3.505 -30.232 28.286 1.00 53.28 C
ATOM 18 C6 G B 31 -2.532 -29.814 29.224 1.00 53.84 C
ATOM 19 O6 G B 31 -2.650 -28.932 30.088 1.00 54.26 O
ATOM 20 N1 G B 31 -1.338 -30.535 29.107 1.00 53.43 N
ATOM 21 C2 G B 31 -1.123 -31.534 28.184 1.00 53.23 C
ATOM 22 N2 G B 31 0.080 -32.122 28.204 1.00 53.14 N
ATOM 23 N3 G B 31 -2.029 -31.931 27.296 1.00 53.24 N
ATOM 24 C4 G B 31 -3.197 -31.242 27.399 1.00 52.92 C
ATOM 25 P A B 32 -4.846 -32.993 21.289 1.00 50.38 P
ATOM 26 OP1 A B 32 -4.591 -34.296 20.632 1.00 50.72 O
ATOM 27 OP2 A B 32 -3.911 -31.856 21.133 1.00 50.22 O
ATOM 28 O5' A B 32 -6.304 -32.529 20.839 1.00 51.56 O
TER

Atoms:
OP1: (-6.617,-44.958,26.435)
OP2: (-8.455,-43.376,27.225)
C3': (-4.079,-40.947,27.846)
C1': (-5.009,-39.025,26.817)
C5': (-4.933,-42.481,26.003)
O6: (-10.364,-36.761,28.282)
O4': (-4.990,-40.077,25.872)
C8: (-7.419,-39.680,27.332)
C2: (-7.159,-35.324,27.668)
C6: (-9.158,-36.710,28.008)
C5: (-8.300,-37.791,27.705)
C4: (-6.974,-37.534,27.426)
P: (-7.283,-43.637,26.354)
C4': (-4.212,-41.194,26.354)
C2': (-4.065,-39.426,27.941)
O2': (-2.795,-38.871,27.667)
N1: (-8.499,-35.482,27.965)
N2: (-6.676,-34.071,27.666)
N3: (-6.343,-36.333,27.387)
N7: (-8.570,-39.152,27.645)
N9: (-6.401,-38.762,27.186)
O5': (-6.226,-42.464,26.599)
O3': (-2.879,-41.536,28.304)
OP1: (-0.171,-36.435,24.847)
OP2: (0.443,-34.405,26.267)
C3': (-3.873,-33.528,23.656)
C1': (-4.558,-32.339,25.524)
C5': (-3.055,-35.460,25.106)
O6: (-2.650,-28.932,30.088)
O4': (-4.540,-33.692,25.933)
C8: (-5.237,-30.494,27.100)
C2: (-1.123,-31.534,28.184)
C6: (-2.532,-29.814,29.224)
C5: (-3.505,-30.232,28.286)
C4: (-3.197,-31.242,27.399)
P: (-0.527,-35.457,25.899)
C4': (-4.198,-34.510,24.775)
C2': (-3.482,-32.287,24.452)
O2': (-3.539,-31.082,23.715)
N1: (-1.338,-30.535,29.107)
N2: (0.080,-32.122,28.204)
N3: (-2.029,-31.931,27.296)
N7: (-4.794,-29.770,28.089)
N9: (-4.329,-31.412,26.630)
O5': (-1.900,-34.729,25.524)
O3': (-5.019,-33.302,22.845)
Image (generated by PyMOL):
PyMOL image
show in jmol